RNA–Protein interactions for RNA: ENST00000573521.1

PCDHGA9-201, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA9, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-201ENST00000573521 IGHV4-61A0A0C4DH41 118 aa9.44□□□□□ -0.9
PCDHGA9-201ENST00000573521 LY6LH3BQJ8 138 aa9.44□□□□□ -0.9
PCDHGA9-201ENST00000573521 SPART-AS1P0CW21 52 aa9.44□□□□□ -0.9
PCDHGA9-201ENST00000573521 FAM222AQ5U5X8 452 aa9.44□□□□□ -0.9
PCDHGA9-201ENST00000573521 TP53TG3Q9ULZ0 132 aa9.44□□□□□ -0.9
PCDHGA9-201ENST00000573521 DNAH14Q0VDD8 3507 aa9.44□□□□□ -0.9
PCDHGA9-201ENST00000573521 TECTAO75443 2155 aa9.44□□□□□ -0.9
PCDHGA9-201ENST00000573521 IGHV4OR15-8A0A075B7B6 117 aa9.44□□□□□ -0.9
PCDHGA9-201ENST00000573521 A0A087WW49 117 aa9.44□□□□□ -0.9
PCDHGA9-201ENST00000573521 MSMPQ1L6U9 139 aa9.43□□□□□ -0.9
PCDHGA9-201ENST00000573521 MUC22E2RYF6 1773 aaPredicted RBP9.43□□□□□ -0.9
PCDHGA9-201ENST00000573521 NDUFC2O95298 119 aa9.43□□□□□ -0.9
PCDHGA9-201ENST00000573521 PSMB8P28062 276 aa9.43□□□□□ -0.9
PCDHGA9-201ENST00000573521 NUP210LQ5VU65 1888 aa9.42□□□□□ -0.9
PCDHGA9-201ENST00000573521 SZT2Q5T011 3432 aa9.42□□□□□ -0.9
PCDHGA9-201ENST00000573521 LINC00322Q6ZN03 302 aaPredicted RBP9.42□□□□□ -0.9
PCDHGA9-201ENST00000573521 NDUFA1O15239 70 aa9.42□□□□□ -0.9
PCDHGA9-201ENST00000573521 FRMD6-AS1P0C7T7 363 aa9.42□□□□□ -0.9
PCDHGA9-201ENST00000573521 DEFB113Q30KQ7 82 aa9.42□□□□□ -0.9
PCDHGA9-201ENST00000573521 Q6ZUT4 128 aa9.42□□□□□ -0.9
PCDHGA9-201ENST00000573521 C1orf43Q9BWL3 253 aa9.42□□□□□ -0.9
PCDHGA9-201ENST00000573521 TRAV26-1A0A087WT03 109 aa9.42□□□□□ -0.9
PCDHGA9-201ENST00000573521 FAM236AA0A1B0GUQ0 79 aa9.42□□□□□ -0.9
PCDHGA9-201ENST00000573521 FAM236BA0A1B0GV22 79 aa9.42□□□□□ -0.9
PCDHGA9-201ENST00000573521 MED13Q9UHV7 2174 aa9.42□□□□□ -0.9
PCDHGA9-201ENST00000573521 DOCK10Q96BY6 2186 aa9.41□□□□□ -0.9
PCDHGA9-201ENST00000573521 PCNX2A6NKB5 2137 aa9.41□□□□□ -0.9
PCDHGA9-201ENST00000573521 SMIM9A6NGZ8 99 aa9.41□□□□□ -0.9
PCDHGA9-201ENST00000573521 UQCRQO14949 82 aa9.41□□□□□ -0.9
PCDHGA9-201ENST00000573521 RBM3P98179 157 aaKnown RBP9.41□□□□□ -0.9
PCDHGA9-201ENST00000573521 TRBV27A0A0K0K1C4 114 aa9.41□□□□□ -0.9
PCDHGA9-201ENST00000573521 A0A1B0GX51 115 aa9.41□□□□□ -0.9
PCDHGA9-201ENST00000573521 RPL39P62891 51 aaKnown RBP9.41□□□□□ -0.9
PCDHGA9-201ENST00000573521 ASPHD1Q5U4P2 390 aa9.41□□□□□ -0.9
PCDHGA9-201ENST00000573521 ADORA2A-AS1P86434 159 aa9.41□□□□□ -0.9
PCDHGA9-201ENST00000573521 LRRC75A-AS1Q8N1F1 130 aa9.41□□□□□ -0.9
PCDHGA9-201ENST00000573521 CCDC140Q96MF4 163 aa9.41□□□□□ -0.9
PCDHGA9-201ENST00000573521 XCL1P47992 114 aa9.41□□□□□ -0.9
PCDHGA9-201ENST00000573521 SPTBN2O15020 2390 aa9.41□□□□□ -0.9
PCDHGA9-201ENST00000573521 CFHR3Q02985 330 aa9.4□□□□□ -0.9
PCDHGA9-201ENST00000573521 K7EQG2 157 aa9.4□□□□□ -0.9
PCDHGA9-201ENST00000573521 A0A0J9YY99 117 aa9.4□□□□□ -0.91
PCDHGA9-201ENST00000573521 ZNF80P51504 273 aaPredicted RBP9.4□□□□□ -0.91
PCDHGA9-201ENST00000573521 LOXL1Q08397 574 aaPredicted RBP9.4□□□□□ -0.91
PCDHGA9-201ENST00000573521 ZFAND3Q9H8U3 227 aa9.4□□□□□ -0.91
PCDHGA9-201ENST00000573521 CHD3Q12873 2000 aaKnown RBP9.39□□□□□ -0.91
PCDHGA9-201ENST00000573521 TMEM223A0PJW6 202 aa9.39□□□□□ -0.91
PCDHGA9-201ENST00000573521 COX8CQ7Z4L0 72 aa9.39□□□□□ -0.91
PCDHGA9-201ENST00000573521 C3orf56Q8N813 242 aa9.39□□□□□ -0.91
PCDHGA9-201ENST00000573521 IBA57-AS1B1ANH7 110 aa9.39□□□□□ -0.91
PCDHGA9-201ENST00000573521 TCL1BO95988 128 aa9.39□□□□□ -0.91
PCDHGA9-201ENST00000573521 IGHV4-38-2P0DP08 117 aa9.39□□□□□ -0.91
PCDHGA9-201ENST00000573521 MP68P56378 58 aa9.39□□□□□ -0.91
PCDHGA9-201ENST00000573521 BLCAPP62952 87 aa9.39□□□□□ -0.91
PCDHGA9-201ENST00000573521 GYPEP15421 78 aa9.39□□□□□ -0.91
PCDHGA9-201ENST00000573521 NFE4Q86UQ8 179 aa9.39□□□□□ -0.91
PCDHGA9-201ENST00000573521 ETDCA0A1B0GVM5 59 aa9.38□□□□□ -0.91
PCDHGA9-201ENST00000573521 MRGPRG-AS1Q2M3A8 158 aa9.38□□□□□ -0.91
PCDHGA9-201ENST00000573521 DIRC1Q969H9 104 aa9.38□□□□□ -0.91
PCDHGA9-201ENST00000573521 PRO0255Q9UI72 69 aa9.38□□□□□ -0.91
PCDHGA9-201ENST00000573521 TRANK1O15050 2925 aa9.38□□□□□ -0.91
PCDHGA9-201ENST00000573521 SPATA25Q9BR10 227 aa9.38□□□□□ -0.91
PCDHGA9-201ENST00000573521 ZMAT4Q9H898 229 aa9.38□□□□□ -0.91
PCDHGA9-201ENST00000573521 IGLV2-11P01706 119 aa9.38□□□□□ -0.91
PCDHGA9-201ENST00000573521 C5orf38Q86SI9 138 aa9.38□□□□□ -0.91
PCDHGA9-201ENST00000573521 ABCA4P78363 2273 aa9.38□□□□□ -0.91
PCDHGA9-201ENST00000573521 A0A1W2PNU3 283 aaPredicted RBP9.38□□□□□ -0.91
PCDHGA9-201ENST00000573521 ZFP36P26651 326 aaKnown RBP9.38□□□□□ -0.91
PCDHGA9-201ENST00000573521 LMO4P61968 165 aa9.38□□□□□ -0.91
PCDHGA9-201ENST00000573521 RNASE13Q5GAN3 156 aaKnown RBP9.38□□□□□ -0.91
PCDHGA9-201ENST00000573521 CAMK2N2Q96S95 79 aa9.38□□□□□ -0.91
PCDHGA9-201ENST00000573521 NREPQ16612 68 aa9.37□□□□□ -0.91
PCDHGA9-201ENST00000573521 UFSP1Q6NVU6 142 aa9.37□□□□□ -0.91
PCDHGA9-201ENST00000573521 RNF185Q96GF1 192 aa9.37□□□□□ -0.91
PCDHGA9-201ENST00000573521 Q6Q795 121 aa9.37□□□□□ -0.91
PCDHGA9-201ENST00000573521 ARFGEF3Q5TH69 2177 aa9.37□□□□□ -0.91
PCDHGA9-201ENST00000573521 IGHV4-30-2A0A087WSY4 118 aa9.37□□□□□ -0.91
PCDHGA9-201ENST00000573521 ATP5EP56381 51 aaPredicted RBP9.37□□□□□ -0.91
PCDHGA9-201ENST00000573521 RBX1P62877 108 aa9.37□□□□□ -0.91
PCDHGA9-201ENST00000573521 PRUNE2Q8WUY3 3088 aa9.37□□□□□ -0.91
PCDHGA9-201ENST00000573521 NDUFV3P56181 108 aaKnown RBP9.36□□□□□ -0.91
PCDHGA9-201ENST00000573521 TTTY13Q9BZ97 58 aa9.36□□□□□ -0.91
PCDHGA9-201ENST00000573521 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.36□□□□□ -0.91
PCDHGA9-201ENST00000573521 ZNF22P17026 224 aaPredicted RBP9.36□□□□□ -0.91
PCDHGA9-201ENST00000573521 SLURP1P55000 103 aa9.36□□□□□ -0.91
PCDHGA9-201ENST00000573521 TMEM61Q8N0U2 210 aa9.36□□□□□ -0.91
PCDHGA9-201ENST00000573521 Q8N6K4 173 aa9.36□□□□□ -0.91
PCDHGA9-201ENST00000573521 HHLA3Q9XRX5 114 aa9.36□□□□□ -0.91
PCDHGA9-201ENST00000573521 CACNA1BQ00975 2339 aa9.36□□□□□ -0.91
PCDHGA9-201ENST00000573521 MRPS36P82909 103 aaKnown RBP9.36□□□□□ -0.91
PCDHGA9-201ENST00000573521 ZFAND2AQ8N6M9 145 aa9.36□□□□□ -0.91
PCDHGA9-201ENST00000573521 LECT2O14960 151 aa9.35□□□□□ -0.91
PCDHGA9-201ENST00000573521 NDUFB1O75438 58 aa9.35□□□□□ -0.91
PCDHGA9-201ENST00000573521 BRI3O95415 125 aa9.35□□□□□ -0.91
PCDHGA9-201ENST00000573521 MIR7-3HGQ8N6C7 128 aa9.35□□□□□ -0.91
PCDHGA9-201ENST00000573521 SS18L2Q9UHA2 77 aa9.35□□□□□ -0.91
PCDHGA9-201ENST00000573521 FAM240AA0A1B0GVK7 77 aa9.35□□□□□ -0.91
PCDHGA9-201ENST00000573521 IGHV3-33P01772 117 aa9.35□□□□□ -0.91
PCDHGA9-201ENST00000573521 REV3LO60673 3130 aa9.35□□□□□ -0.91
PCDHGA9-201ENST00000573521 GRNP28799 593 aaKnown RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms