RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 M0QY20 66 aa12.57□□□□□ -0.4
RPAIN-208ENST00000571043 VCYO14598 125 aa12.57□□□□□ -0.4
RPAIN-208ENST00000571043 CTAG1AP78358 180 aa12.57□□□□□ -0.4
RPAIN-208ENST00000571043 MRPL52Q86TS9 123 aaKnown RBP12.57□□□□□ -0.4
RPAIN-208ENST00000571043 C18orf15Q96N68 181 aa12.57□□□□□ -0.4
RPAIN-208ENST00000571043 GOLT1BQ9Y3E0 138 aa12.57□□□□□ -0.4
RPAIN-208ENST00000571043 G0S2P27469 103 aa12.57□□□□□ -0.4
RPAIN-208ENST00000571043 EGFEM1PQ0D2K5 195 aa12.57□□□□□ -0.4
RPAIN-208ENST00000571043 SAMD5Q5TGI4 173 aa12.57□□□□□ -0.4
RPAIN-208ENST00000571043 TOMM6Q96B49 74 aa12.57□□□□□ -0.4
RPAIN-208ENST00000571043 PMCHL2Q9BQD1 86 aa12.57□□□□□ -0.4
RPAIN-208ENST00000571043 TMEM208Q9BTX3 173 aa12.57□□□□□ -0.4
RPAIN-208ENST00000571043 MUC4Q99102 2169 aa12.56□□□□□ -0.4
RPAIN-208ENST00000571043 AGRNO00468 2067 aa12.56□□□□□ -0.4
RPAIN-208ENST00000571043 LINC01549A6NIU2 74 aa12.56□□□□□ -0.4
RPAIN-208ENST00000571043 TRBV27A0A0K0K1C4 114 aa12.55□□□□□ -0.4
RPAIN-208ENST00000571043 hDV102S1A0JD36 115 aa12.55□□□□□ -0.4
RPAIN-208ENST00000571043 G3V4G9 280 aa12.55□□□□□ -0.4
RPAIN-208ENST00000571043 H7C1H1 209 aa12.55□□□□□ -0.4
RPAIN-208ENST00000571043 PRM2P04554 102 aa12.55□□□□□ -0.4
RPAIN-208ENST00000571043 MORN3Q6PF18 240 aaPredicted RBP12.55□□□□□ -0.4
RPAIN-208ENST00000571043 SDHAF1A6NFY7 115 aa12.54□□□□□ -0.4
RPAIN-208ENST00000571043 PRSS1P07477 247 aa12.54□□□□□ -0.4
RPAIN-208ENST00000571043 LBHQ53QV2 105 aaPredicted RBP12.54□□□□□ -0.4
RPAIN-208ENST00000571043 UFSP1Q6NVU6 142 aa12.54□□□□□ -0.4
RPAIN-208ENST00000571043 KIR2DL4Q99706 377 aa12.54□□□□□ -0.4
RPAIN-208ENST00000571043 C1QTNF4Q9BXJ3 329 aa12.54□□□□□ -0.4
RPAIN-208ENST00000571043 ZMAT5Q9UDW3 170 aaKnown RBP12.54□□□□□ -0.4
RPAIN-208ENST00000571043 RHODO00212 210 aa12.53□□□□□ -0.4
RPAIN-208ENST00000571043 GIG44P09565 113 aaPredicted RBP12.53□□□□□ -0.4
RPAIN-208ENST00000571043 ODF1Q14990 250 aa12.53□□□□□ -0.4
RPAIN-208ENST00000571043 IL17DQ8TAD2 202 aa12.53□□□□□ -0.4
RPAIN-208ENST00000571043 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.52□□□□□ -0.4
RPAIN-208ENST00000571043 KRTAP10-11P60412 298 aa12.52□□□□□ -0.4
RPAIN-208ENST00000571043 C2orf66Q6UXQ4 117 aa12.52□□□□□ -0.4
RPAIN-208ENST00000571043 Q6ZN92 141 aa12.52□□□□□ -0.4
RPAIN-208ENST00000571043 ZMAT4Q9H898 229 aa12.52□□□□□ -0.4
RPAIN-208ENST00000571043 M0R143 59 aa12.52□□□□□ -0.41
RPAIN-208ENST00000571043 RS1O15537 224 aa12.52□□□□□ -0.41
RPAIN-208ENST00000571043 AZU1P20160 251 aa12.52□□□□□ -0.41
RPAIN-208ENST00000571043 CFAP126Q5VTH2 177 aa12.52□□□□□ -0.41
RPAIN-208ENST00000571043 RNASE8Q8TDE3 154 aaKnown RBP12.52□□□□□ -0.41
RPAIN-208ENST00000571043 SCGB3A1Q96QR1 104 aa12.52□□□□□ -0.41
RPAIN-208ENST00000571043 WFDC10AQ9H1F0 79 aa12.52□□□□□ -0.41
RPAIN-208ENST00000571043 TRAV12-1A0A0B4J245 112 aa12.51□□□□□ -0.41
RPAIN-208ENST00000571043 HNRNPA3P51991 378 aaKnown RBP12.51□□□□□ -0.41
RPAIN-208ENST00000571043 ZFP2Q6ZN57 461 aa12.51□□□□□ -0.41
RPAIN-208ENST00000571043 NEGR1Q7Z3B1 354 aa12.51□□□□□ -0.41
RPAIN-208ENST00000571043 TMEM263Q8WUH6 116 aaKnown RBP12.51□□□□□ -0.41
RPAIN-208ENST00000571043 DKK2Q9UBU2 259 aa12.51□□□□□ -0.41
RPAIN-208ENST00000571043 IGHV3OR16-12A0A075B7B8 117 aa12.5□□□□□ -0.41
RPAIN-208ENST00000571043 RPL35AP18077 110 aaKnown RBP12.5□□□□□ -0.41
RPAIN-208ENST00000571043 KPRPQ5T749 579 aaPredicted RBP12.5□□□□□ -0.41
RPAIN-208ENST00000571043 MRPL16Q9NX20 251 aaKnown RBP12.5□□□□□ -0.41
RPAIN-208ENST00000571043 CYSLTR1Q9Y271 337 aa12.5□□□□□ -0.41
RPAIN-208ENST00000571043 MRPS16Q9Y3D3 137 aaKnown RBP12.5□□□□□ -0.41
RPAIN-208ENST00000571043 A0A087WX48 190 aa12.49□□□□□ -0.41
RPAIN-208ENST00000571043 RHOHQ15669 191 aa12.49□□□□□ -0.41
RPAIN-208ENST00000571043 ERASQ7Z444 233 aa12.49□□□□□ -0.41
RPAIN-208ENST00000571043 GTSCR1Q86UQ5 136 aa12.49□□□□□ -0.41
RPAIN-208ENST00000571043 C2orf88Q9BSF0 95 aa12.49□□□□□ -0.41
RPAIN-208ENST00000571043 SNHG12Q9BXW3 62 aa12.49□□□□□ -0.41
RPAIN-208ENST00000571043 SLC25A34Q6PIV7 304 aa12.48□□□□□ -0.41
RPAIN-208ENST00000571043 CSNK1G2-AS1Q8NCQ2 148 aa12.48□□□□□ -0.41
RPAIN-208ENST00000571043 I3L3M4 83 aa12.47□□□□□ -0.41
RPAIN-208ENST00000571043 DPM2O94777 84 aa12.47□□□□□ -0.41
RPAIN-208ENST00000571043 IGKCP01834 107 aa12.47□□□□□ -0.41
RPAIN-208ENST00000571043 IGHV3-73A0A0B4J1V6 119 aa12.47□□□□□ -0.41
RPAIN-208ENST00000571043 EREGO14944 169 aa12.47□□□□□ -0.41
RPAIN-208ENST00000571043 IGHV3-53P01767 116 aa12.47□□□□□ -0.41
RPAIN-208ENST00000571043 COX8AP10176 69 aa12.47□□□□□ -0.41
RPAIN-208ENST00000571043 DAZ2Q13117 558 aaKnown RBP12.47□□□□□ -0.41
RPAIN-208ENST00000571043 C16orf74Q96GX8 76 aa12.47□□□□□ -0.41
RPAIN-208ENST00000571043 ANKRD39Q53RE8 183 aa12.46□□□□□ -0.42
RPAIN-208ENST00000571043 NEXN-AS1Q8NBZ9 246 aa12.46□□□□□ -0.42
RPAIN-208ENST00000571043 TMEM141Q96I45 108 aa12.46□□□□□ -0.42
RPAIN-208ENST00000571043 DNAJC30Q96LL9 226 aa12.46□□□□□ -0.42
RPAIN-208ENST00000571043 TP53TG1Q9Y2A0 90 aa12.46□□□□□ -0.42
RPAIN-208ENST00000571043 TSHBP01222 138 aa12.45□□□□□ -0.42
RPAIN-208ENST00000571043 STPG4Q8N801 248 aa12.45□□□□□ -0.42
RPAIN-208ENST00000571043 TIMM17AQ99595 171 aa12.45□□□□□ -0.42
RPAIN-208ENST00000571043 MRPL35Q9NZE8 188 aaKnown RBP12.45□□□□□ -0.42
RPAIN-208ENST00000571043 HHLA3Q9XRX5 114 aa12.45□□□□□ -0.42
RPAIN-208ENST00000571043 TNFRSF18Q9Y5U5 241 aa12.45□□□□□ -0.42
RPAIN-208ENST00000571043 TRGV1A0A0A0MS02 117 aa12.44□□□□□ -0.42
RPAIN-208ENST00000571043 IGIPA6NJ69 53 aa12.44□□□□□ -0.42
RPAIN-208ENST00000571043 PLNP26678 52 aa12.44□□□□□ -0.42
RPAIN-208ENST00000571043 BAALCQ8WXS3 180 aa12.44□□□□□ -0.42
RPAIN-208ENST00000571043 F8VRH5 84 aa12.43□□□□□ -0.42
RPAIN-208ENST00000571043 Q6ZSN1 163 aa12.43□□□□□ -0.42
RPAIN-208ENST00000571043 OR4C5Q8NGB2 326 aa12.43□□□□□ -0.42
RPAIN-208ENST00000571043 RRN3P1Q2M238 152 aa12.42□□□□□ -0.42
RPAIN-208ENST00000571043 OVOL2Q9BRP0 275 aa12.42□□□□□ -0.42
RPAIN-208ENST00000571043 CHTOPQ9Y3Y2 248 aaKnown RBP12.42□□□□□ -0.42
RPAIN-208ENST00000571043 TRAV4A0A0B4J268 109 aa12.42□□□□□ -0.42
RPAIN-208ENST00000571043 PLAC8L1A1L4L8 177 aa12.42□□□□□ -0.42
RPAIN-208ENST00000571043 DLEU1O43261 78 aa12.42□□□□□ -0.42
RPAIN-208ENST00000571043 P0DMU3 169 aa12.42□□□□□ -0.42
RPAIN-208ENST00000571043 FAM231AP0DMU4 169 aa12.42□□□□□ -0.42
RPAIN-208ENST00000571043 FAM231CP0DMU5 169 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 166.1 ms