RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 AVPP01185 164 aa11.47□□□□□ -0.57
USP43-202ENST00000570475 SPINK8P0C7L1 97 aa11.47□□□□□ -0.57
USP43-202ENST00000570475 PROK1P58294 105 aa11.47□□□□□ -0.57
USP43-202ENST00000570475 IGHG2P01859 326 aa11.47□□□□□ -0.57
USP43-202ENST00000570475 PAPPA-AS1Q5QFB9 102 aa11.47□□□□□ -0.57
USP43-202ENST00000570475 A4D1N5 150 aa11.46□□□□□ -0.57
USP43-202ENST00000570475 MORN3Q6PF18 240 aaPredicted RBP11.46□□□□□ -0.58
USP43-202ENST00000570475 UTP20O75691 2785 aaKnown RBP11.46□□□□□ -0.58
USP43-202ENST00000570475 CKS1BP61024 79 aa11.46□□□□□ -0.58
USP43-202ENST00000570475 ZNF580Q9UK33 172 aa11.46□□□□□ -0.58
USP43-202ENST00000570475 HIVEP2P31629 2446 aa11.45□□□□□ -0.58
USP43-202ENST00000570475 IGHV1OR15-1A0A075B7D0 117 aa11.45□□□□□ -0.58
USP43-202ENST00000570475 IGKV3OR2-268A0A0C4DH90 116 aa11.45□□□□□ -0.58
USP43-202ENST00000570475 TSPEAR-AS2P59090 65 aa11.45□□□□□ -0.58
USP43-202ENST00000570475 TRPT1Q86TN4 253 aaKnown RBP11.45□□□□□ -0.58
USP43-202ENST00000570475 ERG28Q9UKR5 140 aa11.45□□□□□ -0.58
USP43-202ENST00000570475 IGHV4-4A0A075B6R2 117 aa11.45□□□□□ -0.58
USP43-202ENST00000570475 A0A1W2PRX2 142 aa11.45□□□□□ -0.58
USP43-202ENST00000570475 TRAV8-3A0A0A6YYJ7 113 aa11.44□□□□□ -0.58
USP43-202ENST00000570475 A0A1B0GV72 72 aa11.44□□□□□ -0.58
USP43-202ENST00000570475 ZNRF2Q8NHG8 242 aa11.44□□□□□ -0.58
USP43-202ENST00000570475 LINC01587Q99440 93 aa11.44□□□□□ -0.58
USP43-202ENST00000570475 CLUHP3Q96NS8 147 aa11.44□□□□□ -0.58
USP43-202ENST00000570475 PRO1854Q9UHT4 67 aa11.44□□□□□ -0.58
USP43-202ENST00000570475 A0A0J9YY99 117 aa11.44□□□□□ -0.58
USP43-202ENST00000570475 A8MZ25 164 aa11.44□□□□□ -0.58
USP43-202ENST00000570475 TCL1BO95988 128 aa11.44□□□□□ -0.58
USP43-202ENST00000570475 GEMIN7Q9H840 131 aaKnown RBP11.44□□□□□ -0.58
USP43-202ENST00000570475 IGHV3-53P01767 116 aa11.43□□□□□ -0.58
USP43-202ENST00000570475 DYNLRB2Q8TF09 96 aa11.43□□□□□ -0.58
USP43-202ENST00000570475 CRYGDP07320 174 aa11.43□□□□□ -0.58
USP43-202ENST00000570475 DAND5Q8N907 189 aa11.43□□□□□ -0.58
USP43-202ENST00000570475 B4DSR2 109 aa11.43□□□□□ -0.58
USP43-202ENST00000570475 TSHBP01222 138 aa11.43□□□□□ -0.58
USP43-202ENST00000570475 FOXI1Q12951 378 aa11.43□□□□□ -0.58
USP43-202ENST00000570475 NDUFA11Q86Y39 141 aa11.43□□□□□ -0.58
USP43-202ENST00000570475 MUSTN1Q8IVN3 82 aa11.43□□□□□ -0.58
USP43-202ENST00000570475 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.42□□□□□ -0.58
USP43-202ENST00000570475 IGKV2-29A2NJV5 120 aaPredicted RBP11.42□□□□□ -0.58
USP43-202ENST00000570475 TCTEX1D4Q5JR98 221 aa11.42□□□□□ -0.58
USP43-202ENST00000570475 UBE2E2Q96LR5 201 aa11.42□□□□□ -0.58
USP43-202ENST00000570475 C10orf105Q8TEF2 133 aa11.42□□□□□ -0.58
USP43-202ENST00000570475 A6NDX4 124 aa11.42□□□□□ -0.58
USP43-202ENST00000570475 SOCS3O14543 225 aa11.41□□□□□ -0.58
USP43-202ENST00000570475 TMEM141Q96I45 108 aa11.41□□□□□ -0.58
USP43-202ENST00000570475 CFC1BP0CG36 223 aa11.4□□□□□ -0.58
USP43-202ENST00000570475 CFC1P0CG37 223 aa11.4□□□□□ -0.58
USP43-202ENST00000570475 SLURP1P55000 103 aa11.4□□□□□ -0.58
USP43-202ENST00000570475 TIMM21Q9BVV7 248 aa11.4□□□□□ -0.58
USP43-202ENST00000570475 IGHV4OR15-8A0A075B7B6 117 aa11.4□□□□□ -0.58
USP43-202ENST00000570475 A0A087WW49 117 aa11.4□□□□□ -0.58
USP43-202ENST00000570475 APRG1Q8IVJ8 170 aa11.4□□□□□ -0.58
USP43-202ENST00000570475 C1QTNF4Q9BXJ3 329 aa11.4□□□□□ -0.58
USP43-202ENST00000570475 IGLV4-69A0A075B6H9 119 aa11.4□□□□□ -0.58
USP43-202ENST00000570475 LINC01546A6NGU7 62 aa11.4□□□□□ -0.58
USP43-202ENST00000570475 RNF223E7ERA6 249 aa11.4□□□□□ -0.58
USP43-202ENST00000570475 I3L3M4 83 aa11.4□□□□□ -0.58
USP43-202ENST00000570475 HOXD3P31249 432 aaPredicted RBP11.4□□□□□ -0.58
USP43-202ENST00000570475 MT-ATP8P03928 68 aa11.39□□□□□ -0.59
USP43-202ENST00000570475 POLR2KP53803 58 aaKnown RBP11.39□□□□□ -0.59
USP43-202ENST00000570475 XCL2Q9UBD3 114 aa11.39□□□□□ -0.59
USP43-202ENST00000570475 IGIPA6NJ69 53 aa11.39□□□□□ -0.59
USP43-202ENST00000570475 C10orf126Q8N4M7 172 aa11.39□□□□□ -0.59
USP43-202ENST00000570475 CFAP46Q8IYW2 2715 aa11.38□□□□□ -0.59
USP43-202ENST00000570475 A0A0J9YX75 114 aa11.38□□□□□ -0.59
USP43-202ENST00000570475 DCANP1Q8TF63 244 aa11.38□□□□□ -0.59
USP43-202ENST00000570475 ATP6V0BQ99437 205 aa11.38□□□□□ -0.59
USP43-202ENST00000570475 SLC25A20O43772 301 aa11.38□□□□□ -0.59
USP43-202ENST00000570475 ANKRD29Q8N6D5 301 aa11.38□□□□□ -0.59
USP43-202ENST00000570475 NFE4Q86UQ8 179 aa11.38□□□□□ -0.59
USP43-202ENST00000570475 M0QY20 66 aa11.37□□□□□ -0.59
USP43-202ENST00000570475 NTN5Q8WTR8 489 aaPredicted RBP11.37□□□□□ -0.59
USP43-202ENST00000570475 CELSR2Q9HCU4 2923 aa11.37□□□□□ -0.59
USP43-202ENST00000570475 KLLNB2CW77 178 aa11.37□□□□□ -0.59
USP43-202ENST00000570475 C18orf65Q6ZTR6 163 aa11.37□□□□□ -0.59
USP43-202ENST00000570475 Q9UF83 564 aa11.37□□□□□ -0.59
USP43-202ENST00000570475 PPDPFLQ8WWR9 84 aa11.36□□□□□ -0.59
USP43-202ENST00000570475 CRIP2P52943 208 aaPredicted RBP11.36□□□□□ -0.59
USP43-202ENST00000570475 LINC00315P59091 139 aa11.36□□□□□ -0.59
USP43-202ENST00000570475 TRAV13-1A0A0B4J241 112 aa11.36□□□□□ -0.59
USP43-202ENST00000570475 CFAP126Q5VTH2 177 aa11.36□□□□□ -0.59
USP43-202ENST00000570475 NDUFA12Q9UI09 145 aa11.36□□□□□ -0.59
USP43-202ENST00000570475 TRGV11A0A075B6L2 103 aa11.35□□□□□ -0.59
USP43-202ENST00000570475 Q6ZSV7 163 aa11.35□□□□□ -0.59
USP43-202ENST00000570475 C20orf203Q8NBC4 194 aa11.35□□□□□ -0.59
USP43-202ENST00000570475 TIMM17AQ99595 171 aa11.35□□□□□ -0.59
USP43-202ENST00000570475 SLC25A29Q8N8R3 303 aa11.35□□□□□ -0.59
USP43-202ENST00000570475 IGHV3-30P01768 117 aa11.35□□□□□ -0.59
USP43-202ENST00000570475 IGHV3-30-5P0DP03 117 aa11.35□□□□□ -0.59
USP43-202ENST00000570475 KIF25-AS1Q9Y6Z4 181 aa11.35□□□□□ -0.59
USP43-202ENST00000570475 RHODO00212 210 aa11.34□□□□□ -0.59
USP43-202ENST00000570475 SMCPP49901 116 aaPredicted RBP11.34□□□□□ -0.59
USP43-202ENST00000570475 PRB1P04280 392 aa11.34□□□□□ -0.59
USP43-202ENST00000570475 MEIG1Q5JSS6 88 aa11.34□□□□□ -0.59
USP43-202ENST00000570475 ZNF22P17026 224 aaPredicted RBP11.34□□□□□ -0.59
USP43-202ENST00000570475 TEN1Q86WV5 123 aa11.34□□□□□ -0.59
USP43-202ENST00000570475 COX6CP09669 75 aa11.33□□□□□ -0.6
USP43-202ENST00000570475 IGHV3-30-3P0DP02 117 aa11.33□□□□□ -0.6
USP43-202ENST00000570475 MED14OSP0DP75 135 aa11.33□□□□□ -0.6
USP43-202ENST00000570475 CFHR3Q02985 330 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms