RNA–Protein interactions for RNA: ENST00000570188.1

RBFOX1-220, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2

Gene RBFOX1, Length 568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-220ENST00000570188 OR10D4PQ8NGN7 298 aa6.99□□□□□ -1.29
RBFOX1-220ENST00000570188 TRGV1A0A0A0MS02 117 aa6.98□□□□□ -1.29
RBFOX1-220ENST00000570188 DEFB135Q30KP9 77 aa6.98□□□□□ -1.29
RBFOX1-220ENST00000570188 FAM19A2Q8N3H0 131 aa6.98□□□□□ -1.29
RBFOX1-220ENST00000570188 RASL10AQ92737 203 aa6.98□□□□□ -1.29
RBFOX1-220ENST00000570188 RPL39LQ96EH5 51 aaKnown RBP6.98□□□□□ -1.29
RBFOX1-220ENST00000570188 NDUFAF3Q9BU61 184 aa6.98□□□□□ -1.29
RBFOX1-220ENST00000570188 TRRAPQ9Y4A5 3859 aa6.98□□□□□ -1.29
RBFOX1-220ENST00000570188 IGHV1-24A0A0C4DH33 117 aa6.97□□□□□ -1.29
RBFOX1-220ENST00000570188 PLAC8L1A1L4L8 177 aa6.97□□□□□ -1.29
RBFOX1-220ENST00000570188 COL6A5A8TX70 2615 aa6.97□□□□□ -1.29
RBFOX1-220ENST00000570188 RHODO00212 210 aa6.97□□□□□ -1.29
RBFOX1-220ENST00000570188 RS1O15537 224 aa6.97□□□□□ -1.29
RBFOX1-220ENST00000570188 PPP1R17O96001 155 aa6.97□□□□□ -1.29
RBFOX1-220ENST00000570188 PCP4P48539 62 aa6.97□□□□□ -1.29
RBFOX1-220ENST00000570188 DAZ2Q13117 558 aaKnown RBP6.97□□□□□ -1.29
RBFOX1-220ENST00000570188 CFAP126Q5VTH2 177 aa6.97□□□□□ -1.29
RBFOX1-220ENST00000570188 Q6ZTI0 123 aa6.97□□□□□ -1.29
RBFOX1-220ENST00000570188 NOP10Q9NPE3 64 aaKnown RBP6.97□□□□□ -1.29
RBFOX1-220ENST00000570188 NXT2Q9NPJ8 142 aaKnown RBP6.97□□□□□ -1.29
RBFOX1-220ENST00000570188 IGHV3-73A0A0B4J1V6 119 aa6.96□□□□□ -1.3
RBFOX1-220ENST00000570188 SMIM9A6NGZ8 99 aa6.96□□□□□ -1.3
RBFOX1-220ENST00000570188 H7C1H1 209 aa6.96□□□□□ -1.3
RBFOX1-220ENST00000570188 PMCHL1Q16048 86 aa6.96□□□□□ -1.3
RBFOX1-220ENST00000570188 LGALS9BQ3B8N2 356 aa6.96□□□□□ -1.3
RBFOX1-220ENST00000570188 UFSP1Q6NVU6 142 aa6.96□□□□□ -1.3
RBFOX1-220ENST00000570188 Q8N8P6 123 aa6.96□□□□□ -1.3
RBFOX1-220ENST00000570188 C20orf78Q9BR46 151 aa6.96□□□□□ -1.3
RBFOX1-220ENST00000570188 SMIM2Q9BVW6 85 aa6.96□□□□□ -1.3
RBFOX1-220ENST00000570188 ANK2Q01484 3957 aa6.95□□□□□ -1.3
RBFOX1-220ENST00000570188 TRAV4A0A0B4J268 109 aa6.95□□□□□ -1.3
RBFOX1-220ENST00000570188 A8MZ25 164 aa6.95□□□□□ -1.3
RBFOX1-220ENST00000570188 SMIM6P0DI80 62 aa6.95□□□□□ -1.3
RBFOX1-220ENST00000570188 EMP1P54849 157 aa6.95□□□□□ -1.3
RBFOX1-220ENST00000570188 OR4C5Q8NGB2 326 aa6.95□□□□□ -1.3
RBFOX1-220ENST00000570188 OVOL2Q9BRP0 275 aa6.95□□□□□ -1.3
RBFOX1-220ENST00000570188 ST20Q9HBF5 79 aa6.95□□□□□ -1.3
RBFOX1-220ENST00000570188 IGLV2-18A0A075B6J9 118 aa6.94□□□□□ -1.3
RBFOX1-220ENST00000570188 LINC01546A6NGU7 62 aa6.94□□□□□ -1.3
RBFOX1-220ENST00000570188 M0QY20 66 aa6.94□□□□□ -1.3
RBFOX1-220ENST00000570188 GAGE7O76087 117 aa6.94□□□□□ -1.3
RBFOX1-220ENST00000570188 IGHV3-53P01767 116 aa6.94□□□□□ -1.3
RBFOX1-220ENST00000570188 HBDP02042 147 aa6.94□□□□□ -1.3
RBFOX1-220ENST00000570188 GAGE12FP0CL80 117 aa6.94□□□□□ -1.3
RBFOX1-220ENST00000570188 GAGE12GP0CL81 117 aa6.94□□□□□ -1.3
RBFOX1-220ENST00000570188 GAGE12IP0CL82 117 aa6.94□□□□□ -1.3
RBFOX1-220ENST00000570188 KRTAP19-4Q3LI73 84 aa6.94□□□□□ -1.3
RBFOX1-220ENST00000570188 ZFP2Q6ZN57 461 aa6.94□□□□□ -1.3
RBFOX1-220ENST00000570188 OR11H2Q8NH07 326 aa6.94□□□□□ -1.3
RBFOX1-220ENST00000570188 EDA2RQ9HAV5 297 aa6.94□□□□□ -1.3
RBFOX1-220ENST00000570188 TRGV2A0A075B6R0 118 aa6.93□□□□□ -1.3
RBFOX1-220ENST00000570188 TRBV6-5A0A0K0K1A5 114 aa6.93□□□□□ -1.3
RBFOX1-220ENST00000570188 LEPROTL1O95214 131 aa6.93□□□□□ -1.3
RBFOX1-220ENST00000570188 KRTDAPP60985 99 aa6.93□□□□□ -1.3
RBFOX1-220ENST00000570188 RPL32P62910 135 aaKnown RBP6.93□□□□□ -1.3
RBFOX1-220ENST00000570188 LURAP1LQ8IV03 231 aa6.93□□□□□ -1.3
RBFOX1-220ENST00000570188 RNF183Q96D59 192 aa6.93□□□□□ -1.3
RBFOX1-220ENST00000570188 ZNF479Q96JC4 524 aa6.93□□□□□ -1.3
RBFOX1-220ENST00000570188 KRTAP3-1Q9BYR8 98 aa6.93□□□□□ -1.3
RBFOX1-220ENST00000570188 NIT2Q9NQR4 276 aa6.93□□□□□ -1.3
RBFOX1-220ENST00000570188 DNAH3Q8TD57 4116 aa6.93□□□□□ -1.3
RBFOX1-220ENST00000570188 IGHV4-28A0A0C4DH34 117 aa6.92□□□□□ -1.3
RBFOX1-220ENST00000570188 SDHAF1A6NFY7 115 aa6.92□□□□□ -1.3
RBFOX1-220ENST00000570188 TCAPO15273 167 aa6.92□□□□□ -1.3
RBFOX1-220ENST00000570188 NPSP0C0P6 89 aa6.92□□□□□ -1.3
RBFOX1-220ENST00000570188 P0DMU3 169 aa6.92□□□□□ -1.3
RBFOX1-220ENST00000570188 FAM231AP0DMU4 169 aa6.92□□□□□ -1.3
RBFOX1-220ENST00000570188 FAM231CP0DMU5 169 aa6.92□□□□□ -1.3
RBFOX1-220ENST00000570188 MIFP14174 115 aa6.92□□□□□ -1.3
RBFOX1-220ENST00000570188 LAGE3Q14657 143 aa6.92□□□□□ -1.3
RBFOX1-220ENST00000570188 PYY3Q5JQD4 70 aa6.92□□□□□ -1.3
RBFOX1-220ENST00000570188 NEGR1Q7Z3B1 354 aa6.92□□□□□ -1.3
RBFOX1-220ENST00000570188 LINC00518Q8N0U6 118 aa6.92□□□□□ -1.3
RBFOX1-220ENST00000570188 C12orf57Q99622 126 aa6.92□□□□□ -1.3
RBFOX1-220ENST00000570188 TMEM70Q9BUB7 260 aa6.92□□□□□ -1.3
RBFOX1-220ENST00000570188 HSPB8Q9UJY1 196 aa6.92□□□□□ -1.3
RBFOX1-220ENST00000570188 A0A096LNJ9 63 aa6.91□□□□□ -1.3
RBFOX1-220ENST00000570188 LYRM9A8MSI8 78 aa6.91□□□□□ -1.3
RBFOX1-220ENST00000570188 K7EMI3 77 aa6.91□□□□□ -1.3
RBFOX1-220ENST00000570188 VCYO14598 125 aa6.91□□□□□ -1.3
RBFOX1-220ENST00000570188 SCGB1D1O95968 90 aa6.91□□□□□ -1.3
RBFOX1-220ENST00000570188 NUDT3O95989 172 aa6.91□□□□□ -1.3
RBFOX1-220ENST00000570188 C3orf79P0CE67 100 aa6.91□□□□□ -1.3
RBFOX1-220ENST00000570188 FCER1GP30273 86 aa6.91□□□□□ -1.3
RBFOX1-220ENST00000570188 POLR2KP53803 58 aaKnown RBP6.91□□□□□ -1.3
RBFOX1-220ENST00000570188 JOSD1Q15040 202 aaPredicted RBP6.91□□□□□ -1.3
RBFOX1-220ENST00000570188 ORMDL2Q53FV1 153 aa6.91□□□□□ -1.3
RBFOX1-220ENST00000570188 LINC00173Q6ZV60 143 aa6.91□□□□□ -1.3
RBFOX1-220ENST00000570188 LINC00612Q8N6U2 182 aa6.91□□□□□ -1.3
RBFOX1-220ENST00000570188 TNFRSF18Q9Y5U5 241 aa6.91□□□□□ -1.3
RBFOX1-220ENST00000570188 K7EQD1 137 aa6.9□□□□□ -1.3
RBFOX1-220ENST00000570188 DEFB4AO15263 64 aa6.9□□□□□ -1.3
RBFOX1-220ENST00000570188 CIDEAO60543 219 aa6.9□□□□□ -1.3
RBFOX1-220ENST00000570188 DEFB130BP0DP73 79 aa6.9□□□□□ -1.3
RBFOX1-220ENST00000570188 DEFB130AP0DP74 79 aa6.9□□□□□ -1.3
RBFOX1-220ENST00000570188 RIPPLY3P57055 190 aa6.9□□□□□ -1.3
RBFOX1-220ENST00000570188 KPRPQ5T749 579 aaPredicted RBP6.9□□□□□ -1.3
RBFOX1-220ENST00000570188 FAM222AQ5U5X8 452 aa6.9□□□□□ -1.3
RBFOX1-220ENST00000570188 Q8NAQ8 132 aa6.9□□□□□ -1.3
RBFOX1-220ENST00000570188 NEXN-AS1Q8NBZ9 246 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms