RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 AMN1Q8IY45 258 aa10.04□□□□□ -0.8
COMMD4-225ENST00000569245 ZNRF2Q8NHG8 242 aa10.04□□□□□ -0.8
COMMD4-225ENST00000569245 RNF185Q96GF1 192 aa10.04□□□□□ -0.8
COMMD4-225ENST00000569245 VSIG2Q96IQ7 327 aa10.04□□□□□ -0.8
COMMD4-225ENST00000569245 SAMD10Q9BYL1 202 aa10.04□□□□□ -0.8
COMMD4-225ENST00000569245 HHLA3Q9XRX5 114 aa10.04□□□□□ -0.8
COMMD4-225ENST00000569245 TRAV4A0A0B4J268 109 aa10.03□□□□□ -0.8
COMMD4-225ENST00000569245 PRSS29PA6NIE9 313 aa10.03□□□□□ -0.8
COMMD4-225ENST00000569245 RHODO00212 210 aa10.03□□□□□ -0.8
COMMD4-225ENST00000569245 PHOX2AO14813 284 aa10.03□□□□□ -0.8
COMMD4-225ENST00000569245 RTL8CO15255 209 aa10.03□□□□□ -0.8
COMMD4-225ENST00000569245 CIDEAO60543 219 aa10.03□□□□□ -0.8
COMMD4-225ENST00000569245 APCSP02743 223 aa10.03□□□□□ -0.8
COMMD4-225ENST00000569245 FABP9Q0Z7S8 132 aa10.03□□□□□ -0.8
COMMD4-225ENST00000569245 ESRGQ1W209 222 aa10.03□□□□□ -0.8
COMMD4-225ENST00000569245 ZFP2Q6ZN57 461 aa10.03□□□□□ -0.8
COMMD4-225ENST00000569245 FRZBQ92765 325 aa10.03□□□□□ -0.8
COMMD4-225ENST00000569245 PRO0255Q9UI72 69 aa10.03□□□□□ -0.8
COMMD4-225ENST00000569245 HECTD4Q9Y4D8 3996 aa10.03□□□□□ -0.8
COMMD4-225ENST00000569245 A0A087WWL8 130 aa10.02□□□□□ -0.81
COMMD4-225ENST00000569245 A0A096LPF7 62 aa10.02□□□□□ -0.81
COMMD4-225ENST00000569245 NBDYA0A0U1RRE5 68 aa10.02□□□□□ -0.81
COMMD4-225ENST00000569245 TRGC2P03986 189 aa10.02□□□□□ -0.81
COMMD4-225ENST00000569245 OR4C5Q8NGB2 326 aa10.02□□□□□ -0.81
COMMD4-225ENST00000569245 Q9H8V8 135 aa10.02□□□□□ -0.81
COMMD4-225ENST00000569245 ICOSQ9Y6W8 199 aa10.02□□□□□ -0.81
COMMD4-225ENST00000569245 CRYBA4P53673 196 aa10.01□□□□□ -0.81
COMMD4-225ENST00000569245 FHL2Q14192 279 aa10.01□□□□□ -0.81
COMMD4-225ENST00000569245 MRPL51Q4U2R6 128 aaKnown RBP10.01□□□□□ -0.81
COMMD4-225ENST00000569245 FAM74A4Q5TZK3 123 aa10.01□□□□□ -0.81
COMMD4-225ENST00000569245 MRAP2Q96G30 205 aa10.01□□□□□ -0.81
COMMD4-225ENST00000569245 ZNF479Q96JC4 524 aa10.01□□□□□ -0.81
COMMD4-225ENST00000569245 FAT2Q9NYQ8 4349 aa10□□□□□ -0.81
COMMD4-225ENST00000569245 PPBPP02775 128 aa10□□□□□ -0.81
COMMD4-225ENST00000569245 MGPP08493 103 aa9.99□□□□□ -0.81
COMMD4-225ENST00000569245 KIAA1644Q3SXP7 199 aa9.99□□□□□ -0.81
COMMD4-225ENST00000569245 MRPS16Q9Y3D3 137 aaKnown RBP9.99□□□□□ -0.81
COMMD4-225ENST00000569245 DNAH17Q9UFH2 4485 aa9.99□□□□□ -0.81
COMMD4-225ENST00000569245 C1orf196B1AJZ1 125 aa9.98□□□□□ -0.81
COMMD4-225ENST00000569245 D6R8Y8 96 aa9.98□□□□□ -0.81
COMMD4-225ENST00000569245 F5H697 171 aa9.98□□□□□ -0.81
COMMD4-225ENST00000569245 CKS2P33552 79 aa9.98□□□□□ -0.81
COMMD4-225ENST00000569245 ZNF56Q15929 161 aa9.98□□□□□ -0.81
COMMD4-225ENST00000569245 MRPL23Q16540 153 aaKnown RBP9.98□□□□□ -0.81
COMMD4-225ENST00000569245 SUMO4Q6EEV6 95 aa9.98□□□□□ -0.81
COMMD4-225ENST00000569245 ORMDL3Q8N138 153 aa9.98□□□□□ -0.81
COMMD4-225ENST00000569245 ALKBH7Q9BT30 221 aaPredicted RBP9.98□□□□□ -0.81
COMMD4-225ENST00000569245 IGHV3-73A0A0B4J1V6 119 aa9.97□□□□□ -0.81
COMMD4-225ENST00000569245 SRIP30626 198 aa9.97□□□□□ -0.81
COMMD4-225ENST00000569245 TTC32Q5I0X7 151 aa9.97□□□□□ -0.81
COMMD4-225ENST00000569245 C6orf223Q8N319 242 aa9.97□□□□□ -0.81
COMMD4-225ENST00000569245 UPK3BQ9BT76 320 aa9.97□□□□□ -0.81
COMMD4-225ENST00000569245 LAMTOR2Q9Y2Q5 125 aa9.97□□□□□ -0.81
COMMD4-225ENST00000569245 TRAV26-2A0A0B4J265 109 aa9.96□□□□□ -0.82
COMMD4-225ENST00000569245 H7C1H1 209 aa9.96□□□□□ -0.82
COMMD4-225ENST00000569245 M0QY20 66 aa9.96□□□□□ -0.82
COMMD4-225ENST00000569245 GYPEP15421 78 aa9.96□□□□□ -0.82
COMMD4-225ENST00000569245 GATA1P15976 413 aaPredicted RBP9.96□□□□□ -0.82
COMMD4-225ENST00000569245 NEGR1Q7Z3B1 354 aa9.96□□□□□ -0.82
COMMD4-225ENST00000569245 PRELID3AQ96N28 172 aa9.96□□□□□ -0.82
COMMD4-225ENST00000569245 A0A1B0GVY2 172 aa9.95□□□□□ -0.82
COMMD4-225ENST00000569245 SMKR1H3BMG3 65 aa9.95□□□□□ -0.82
COMMD4-225ENST00000569245 K7EQD1 137 aa9.95□□□□□ -0.82
COMMD4-225ENST00000569245 GAS8-AS1O95177 125 aa9.95□□□□□ -0.82
COMMD4-225ENST00000569245 NCR2O95944 276 aa9.95□□□□□ -0.82
COMMD4-225ENST00000569245 PPP1R17O96001 155 aa9.95□□□□□ -0.82
COMMD4-225ENST00000569245 LYPD5Q6UWN5 251 aa9.95□□□□□ -0.82
COMMD4-225ENST00000569245 Q6ZSN1 163 aa9.95□□□□□ -0.82
COMMD4-225ENST00000569245 NRACQ8N912 160 aa9.95□□□□□ -0.82
COMMD4-225ENST00000569245 TRBV6-4A0A1B0GX49 114 aa9.94□□□□□ -0.82
COMMD4-225ENST00000569245 HIST1H2BKO60814 126 aa9.94□□□□□ -0.82
COMMD4-225ENST00000569245 HIST1H2BJP06899 126 aa9.94□□□□□ -0.82
COMMD4-225ENST00000569245 HIST1H2BOP23527 126 aa9.94□□□□□ -0.82
COMMD4-225ENST00000569245 HIST1H2BBP33778 126 aa9.94□□□□□ -0.82
COMMD4-225ENST00000569245 HIST1H2BDP58876 126 aa9.94□□□□□ -0.82
COMMD4-225ENST00000569245 RAB5BP61020 215 aa9.94□□□□□ -0.82
COMMD4-225ENST00000569245 HIST1H2BCP62807 126 aa9.94□□□□□ -0.82
COMMD4-225ENST00000569245 HIST2H2BEQ16778 126 aa9.94□□□□□ -0.82
COMMD4-225ENST00000569245 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.94□□□□□ -0.82
COMMD4-225ENST00000569245 HIST1H2BHQ93079 126 aa9.94□□□□□ -0.82
COMMD4-225ENST00000569245 HIST1H2BNQ99877 126 aa9.94□□□□□ -0.82
COMMD4-225ENST00000569245 HIST1H2BMQ99879 126 aa9.94□□□□□ -0.82
COMMD4-225ENST00000569245 TRBV10-1A0A0K0K1A3 114 aa9.93□□□□□ -0.82
COMMD4-225ENST00000569245 TRBV6-5A0A0K0K1A5 114 aa9.93□□□□□ -0.82
COMMD4-225ENST00000569245 PRSS47A8MTI9 375 aa9.93□□□□□ -0.82
COMMD4-225ENST00000569245 SIVA1O15304 175 aa9.93□□□□□ -0.82
COMMD4-225ENST00000569245 TNFRSF6BO95407 300 aa9.93□□□□□ -0.82
COMMD4-225ENST00000569245 NPYP01303 97 aa9.93□□□□□ -0.82
COMMD4-225ENST00000569245 SLC25A29Q8N8R3 303 aa9.93□□□□□ -0.82
COMMD4-225ENST00000569245 NIT2Q9NQR4 276 aa9.93□□□□□ -0.82
COMMD4-225ENST00000569245 PKHD1P08F94 4074 aa9.92□□□□□ -0.82
COMMD4-225ENST00000569245 Q0VG73 95 aa9.92□□□□□ -0.82
COMMD4-225ENST00000569245 OR10J3Q5JRS4 329 aa9.92□□□□□ -0.82
COMMD4-225ENST00000569245 C18orf32Q8TCD1 76 aa9.92□□□□□ -0.82
COMMD4-225ENST00000569245 RPL39LQ96EH5 51 aaKnown RBP9.92□□□□□ -0.82
COMMD4-225ENST00000569245 DNAJC30Q96LL9 226 aa9.92□□□□□ -0.82
COMMD4-225ENST00000569245 C20orf78Q9BR46 151 aa9.92□□□□□ -0.82
COMMD4-225ENST00000569245 KRTAP1-5Q9BYS1 174 aa9.92□□□□□ -0.82
COMMD4-225ENST00000569245 LOC100131303A0A0U1RQF7 123 aa9.91□□□□□ -0.82
COMMD4-225ENST00000569245 TNP2Q05952 138 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms