RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 DKK4Q9UBT3 224 aa5.4□□□□□ -1.55
CNOT1-216ENST00000569240 CFHR3Q02985 330 aa5.39□□□□□ -1.55
CNOT1-216ENST00000569240 ESM1Q9NQ30 184 aa5.39□□□□□ -1.55
CNOT1-216ENST00000569240 IGLV2-11P01706 119 aa5.39□□□□□ -1.55
CNOT1-216ENST00000569240 IGHV3-53P01767 116 aa5.39□□□□□ -1.55
CNOT1-216ENST00000569240 HOXB4P17483 251 aaPredicted RBP5.39□□□□□ -1.55
CNOT1-216ENST00000569240 ESRGQ1W209 222 aa5.39□□□□□ -1.55
CNOT1-216ENST00000569240 URB1-AS1Q96HZ7 61 aa5.39□□□□□ -1.55
CNOT1-216ENST00000569240 IGHV7-81A0A0B4J1V7 117 aa5.39□□□□□ -1.55
CNOT1-216ENST00000569240 DNAH14Q0VDD8 3507 aa5.39□□□□□ -1.55
CNOT1-216ENST00000569240 E7EQL1 145 aa5.38□□□□□ -1.55
CNOT1-216ENST00000569240 DOCK3Q8IZD9 2030 aa5.38□□□□□ -1.55
CNOT1-216ENST00000569240 ICE1Q9Y2F5 2266 aa5.38□□□□□ -1.55
CNOT1-216ENST00000569240 PRSS33Q8NF86 280 aa5.38□□□□□ -1.55
CNOT1-216ENST00000569240 Q9HAA7 133 aa5.38□□□□□ -1.55
CNOT1-216ENST00000569240 MYOFQ9NZM1 2061 aa5.38□□□□□ -1.55
CNOT1-216ENST00000569240 CENPFP49454 3210 aa5.38□□□□□ -1.55
CNOT1-216ENST00000569240 PRYO14603 147 aa5.38□□□□□ -1.55
CNOT1-216ENST00000569240 CASC2Q6XLA1 102 aa5.38□□□□□ -1.55
CNOT1-216ENST00000569240 AJUBAQ96IF1 538 aa5.38□□□□□ -1.55
CNOT1-216ENST00000569240 ANGP03950 147 aaKnown RBP5.38□□□□□ -1.55
CNOT1-216ENST00000569240 BRWD1-AS2P59051 145 aa5.38□□□□□ -1.55
CNOT1-216ENST00000569240 KIAA2026Q5HYC2 2103 aa5.38□□□□□ -1.55
CNOT1-216ENST00000569240 PLAC8L1A1L4L8 177 aa5.38□□□□□ -1.55
CNOT1-216ENST00000569240 IGHV3-38A0A0C4DH36 116 aa5.37□□□□□ -1.55
CNOT1-216ENST00000569240 CRIP3Q6Q6R5 217 aa5.37□□□□□ -1.55
CNOT1-216ENST00000569240 IGHV3-16A0A0C4DH30 117 aa5.37□□□□□ -1.55
CNOT1-216ENST00000569240 Q8N7P7 452 aa5.37□□□□□ -1.55
CNOT1-216ENST00000569240 LINC01356Q8N9X3 169 aa5.37□□□□□ -1.55
CNOT1-216ENST00000569240 PRO0461Q9UI25 63 aa5.37□□□□□ -1.55
CNOT1-216ENST00000569240 ZNF503-AS2A6NEH8 195 aa5.37□□□□□ -1.55
CNOT1-216ENST00000569240 KLK5Q9Y337 293 aaPredicted RBP5.37□□□□□ -1.55
CNOT1-216ENST00000569240 EML6Q6ZMW3 1958 aa5.37□□□□□ -1.55
CNOT1-216ENST00000569240 C9orf85Q96MD7 179 aa5.37□□□□□ -1.55
CNOT1-216ENST00000569240 CCDC140Q96MF4 163 aa5.37□□□□□ -1.55
CNOT1-216ENST00000569240 M0QY20 66 aa5.36□□□□□ -1.55
CNOT1-216ENST00000569240 HTN3P15516 51 aa5.36□□□□□ -1.55
CNOT1-216ENST00000569240 CAMK2N2Q96S95 79 aa5.36□□□□□ -1.55
CNOT1-216ENST00000569240 IGIPA6NJ69 53 aa5.36□□□□□ -1.55
CNOT1-216ENST00000569240 ARHGEF17Q96PE2 2063 aaPredicted RBP5.36□□□□□ -1.55
CNOT1-216ENST00000569240 G3V318 75 aa5.36□□□□□ -1.55
CNOT1-216ENST00000569240 SVILO95425 2214 aa5.36□□□□□ -1.55
CNOT1-216ENST00000569240 DEFB121Q5J5C9 76 aa5.36□□□□□ -1.55
CNOT1-216ENST00000569240 DEFB123Q8N688 67 aa5.36□□□□□ -1.55
CNOT1-216ENST00000569240 ZFAND2AQ8N6M9 145 aa5.36□□□□□ -1.55
CNOT1-216ENST00000569240 PSMG3-AS1Q96PY0 264 aa5.36□□□□□ -1.55
CNOT1-216ENST00000569240 OBSL1O75147 1896 aa5.36□□□□□ -1.55
CNOT1-216ENST00000569240 IGHV3OR16-10A0A075B7F0 116 aa5.36□□□□□ -1.55
CNOT1-216ENST00000569240 PRAC2D3DTV9 90 aa5.36□□□□□ -1.55
CNOT1-216ENST00000569240 RETNQ9HD89 108 aa5.36□□□□□ -1.55
CNOT1-216ENST00000569240 DHRS4-AS1Q9P1J3 65 aa5.36□□□□□ -1.55
CNOT1-216ENST00000569240 SPAG11BQ08648 103 aa5.35□□□□□ -1.55
CNOT1-216ENST00000569240 UBE2E2Q96LR5 201 aa5.35□□□□□ -1.55
CNOT1-216ENST00000569240 hDV103S1A0JD37 113 aa5.35□□□□□ -1.55
CNOT1-216ENST00000569240 MSMBP08118 114 aa5.35□□□□□ -1.55
CNOT1-216ENST00000569240 ATP1A1-AS1Q5TC04 95 aa5.35□□□□□ -1.55
CNOT1-216ENST00000569240 Q6ZQT7 251 aa5.35□□□□□ -1.55
CNOT1-216ENST00000569240 CDKN2A-AS1Q9UH64 79 aa5.35□□□□□ -1.55
CNOT1-216ENST00000569240 ERC2-IT1O76042 136 aa5.35□□□□□ -1.55
CNOT1-216ENST00000569240 LINC01561Q8N1V8 128 aa5.35□□□□□ -1.55
CNOT1-216ENST00000569240 CRIP1P50238 77 aa5.35□□□□□ -1.55
CNOT1-216ENST00000569240 EBI3Q14213 229 aa5.35□□□□□ -1.55
CNOT1-216ENST00000569240 CDH23Q9H251 3354 aa5.35□□□□□ -1.55
CNOT1-216ENST00000569240 TRBV7-6A0A0J9YX20 115 aa5.35□□□□□ -1.55
CNOT1-216ENST00000569240 SPTA1P02549 2419 aa5.35□□□□□ -1.55
CNOT1-216ENST00000569240 LYNX1G3V0Z9 82 aa5.34□□□□□ -1.55
CNOT1-216ENST00000569240 LYNX1P0DP58 116 aa5.34□□□□□ -1.55
CNOT1-216ENST00000569240 NTM-AS1Q6ZSK4 140 aa5.34□□□□□ -1.55
CNOT1-216ENST00000569240 FRMPD3Q5JV73 1810 aa5.34□□□□□ -1.55
CNOT1-216ENST00000569240 PHF3Q92576 2039 aaKnown RBP5.34□□□□□ -1.55
CNOT1-216ENST00000569240 DEFB130BP0DP73 79 aa5.34□□□□□ -1.55
CNOT1-216ENST00000569240 DEFB130AP0DP74 79 aa5.34□□□□□ -1.55
CNOT1-216ENST00000569240 RNASE13Q5GAN3 156 aaKnown RBP5.34□□□□□ -1.55
CNOT1-216ENST00000569240 UBE2D4Q9Y2X8 147 aa5.34□□□□□ -1.55
CNOT1-216ENST00000569240 Q8N9W7 124 aa5.34□□□□□ -1.55
CNOT1-216ENST00000569240 ZNRD1Q9P1U0 126 aa5.34□□□□□ -1.55
CNOT1-216ENST00000569240 H3BPC8 53 aa5.34□□□□□ -1.55
CNOT1-216ENST00000569240 RTTNQ86VV8 2226 aa5.34□□□□□ -1.55
CNOT1-216ENST00000569240 RPL35AP18077 110 aaKnown RBP5.34□□□□□ -1.55
CNOT1-216ENST00000569240 Q6ZPA2 131 aa5.34□□□□□ -1.55
CNOT1-216ENST00000569240 KIR2DL5BQ8NHK3 375 aa5.34□□□□□ -1.55
CNOT1-216ENST00000569240 CTSZQ9UBR2 303 aa5.34□□□□□ -1.56
CNOT1-216ENST00000569240 TMEM254Q8TBM7 123 aa5.33□□□□□ -1.56
CNOT1-216ENST00000569240 NACAE9PAV3 2078 aa5.33□□□□□ -1.56
CNOT1-216ENST00000569240 NCR3O14931 201 aa5.33□□□□□ -1.56
CNOT1-216ENST00000569240 IGFL2Q6UWQ7 119 aa5.33□□□□□ -1.56
CNOT1-216ENST00000569240 DIAPH2-AS1Q14236 149 aa5.33□□□□□ -1.56
CNOT1-216ENST00000569240 CD164Q04900 197 aa5.33□□□□□ -1.56
CNOT1-216ENST00000569240 Q8N9L7 120 aa5.33□□□□□ -1.56
CNOT1-216ENST00000569240 SDK2Q58EX2 2172 aa5.32□□□□□ -1.56
CNOT1-216ENST00000569240 RLFQ13129 1914 aa5.32□□□□□ -1.56
CNOT1-216ENST00000569240 A0A087WZ39 114 aa5.32□□□□□ -1.56
CNOT1-216ENST00000569240 ZNF106Q9H2Y7 1883 aaKnown RBP5.32□□□□□ -1.56
CNOT1-216ENST00000569240 MYO7BQ6PIF6 2116 aa5.32□□□□□ -1.56
CNOT1-216ENST00000569240 TRBV6-4A0A1B0GX49 114 aa5.32□□□□□ -1.56
CNOT1-216ENST00000569240 ALPK3Q96L96 1907 aa5.32□□□□□ -1.56
CNOT1-216ENST00000569240 TSHBP01222 138 aa5.32□□□□□ -1.56
CNOT1-216ENST00000569240 DEFB104AQ8WTQ1 72 aa5.32□□□□□ -1.56
CNOT1-216ENST00000569240 KIAA1671Q9BY89 1806 aa5.32□□□□□ -1.56
CNOT1-216ENST00000569240 ZFAND3Q9H8U3 227 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms