RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 A0A1B0GUT8 65 aa8.73□□□□□ -1.01
CDT1-203ENST00000569140 LINC00315P59091 139 aa8.73□□□□□ -1.01
CDT1-203ENST00000569140 CNFNQ9BYD5 112 aa8.73□□□□□ -1.01
CDT1-203ENST00000569140 NAT8BQ9UHF3 227 aa8.73□□□□□ -1.01
CDT1-203ENST00000569140 TRAV26-2A0A0B4J265 109 aa8.72□□□□□ -1.01
CDT1-203ENST00000569140 DNAH10OSP0CZ25 163 aa8.72□□□□□ -1.01
CDT1-203ENST00000569140 FOXA3P55318 350 aaPredicted RBP8.72□□□□□ -1.01
CDT1-203ENST00000569140 RIGQ13278 110 aa8.72□□□□□ -1.01
CDT1-203ENST00000569140 KCNIP4Q6PIL6 250 aa8.72□□□□□ -1.01
CDT1-203ENST00000569140 RASL11AQ6T310 242 aa8.72□□□□□ -1.01
CDT1-203ENST00000569140 COMMD7Q86VX2 200 aa8.72□□□□□ -1.01
CDT1-203ENST00000569140 URGCP-MRPS24S4R325 110 aa8.72□□□□□ -1.01
CDT1-203ENST00000569140 FAM231BA6NCW3 169 aa8.71□□□□□ -1.02
CDT1-203ENST00000569140 M0QY20 66 aa8.71□□□□□ -1.02
CDT1-203ENST00000569140 C10orf126Q8N4M7 172 aa8.71□□□□□ -1.02
CDT1-203ENST00000569140 NUP35Q8NFH5 326 aa8.71□□□□□ -1.02
CDT1-203ENST00000569140 PNRC1Q12796 327 aaPredicted RBP8.7□□□□□ -1.02
CDT1-203ENST00000569140 LINC01556Q5JQF7 62 aa8.7□□□□□ -1.02
CDT1-203ENST00000569140 UQCC3Q6UW78 93 aa8.7□□□□□ -1.02
CDT1-203ENST00000569140 DAZ4Q86SG3 579 aaKnown RBP8.7□□□□□ -1.02
CDT1-203ENST00000569140 DNAJC30Q96LL9 226 aa8.7□□□□□ -1.02
CDT1-203ENST00000569140 DAZ3Q9NR90 486 aaKnown RBP8.7□□□□□ -1.02
CDT1-203ENST00000569140 SMIM27A0A1W2PRY6 76 aa8.69□□□□□ -1.02
CDT1-203ENST00000569140 TMEM262E9PQX1 116 aa8.69□□□□□ -1.02
CDT1-203ENST00000569140 F8W036 122 aa8.69□□□□□ -1.02
CDT1-203ENST00000569140 PPP1R2P9O14990 202 aa8.69□□□□□ -1.02
CDT1-203ENST00000569140 Q8N3U1 123 aa8.69□□□□□ -1.02
CDT1-203ENST00000569140 DEFB104AQ8WTQ1 72 aa8.69□□□□□ -1.02
CDT1-203ENST00000569140 CHCHD5Q9BSY4 110 aa8.69□□□□□ -1.02
CDT1-203ENST00000569140 Q9HAA7 133 aa8.69□□□□□ -1.02
CDT1-203ENST00000569140 NIT2Q9NQR4 276 aa8.69□□□□□ -1.02
CDT1-203ENST00000569140 A0A087WX48 190 aa8.68□□□□□ -1.02
CDT1-203ENST00000569140 TRBV6-8A0A0A6YYG3 113 aa8.68□□□□□ -1.02
CDT1-203ENST00000569140 K7EP13 123 aa8.68□□□□□ -1.02
CDT1-203ENST00000569140 CAMPP49913 170 aa8.68□□□□□ -1.02
CDT1-203ENST00000569140 TNP2Q05952 138 aa8.68□□□□□ -1.02
CDT1-203ENST00000569140 TMEM97Q5BJF2 176 aa8.68□□□□□ -1.02
CDT1-203ENST00000569140 MRPL54Q6P161 138 aaKnown RBP8.68□□□□□ -1.02
CDT1-203ENST00000569140 GATD1Q8NB37 220 aa8.68□□□□□ -1.02
CDT1-203ENST00000569140 RPL39LQ96EH5 51 aaKnown RBP8.68□□□□□ -1.02
CDT1-203ENST00000569140 MT-ND4LP03901 98 aa8.67□□□□□ -1.02
CDT1-203ENST00000569140 NFE4Q86UQ8 179 aa8.67□□□□□ -1.02
CDT1-203ENST00000569140 AMN1Q8IY45 258 aa8.67□□□□□ -1.02
CDT1-203ENST00000569140 TMEM191AQ9H0A3 160 aa8.67□□□□□ -1.02
CDT1-203ENST00000569140 FRAS1Q86XX4 4008 aa8.67□□□□□ -1.02
CDT1-203ENST00000569140 EPPK1P58107 5090 aaKnown RBP8.66□□□□□ -1.02
CDT1-203ENST00000569140 TRBV25-1A0A075B6N4 114 aa8.66□□□□□ -1.02
CDT1-203ENST00000569140 TMEM218A2RU14 115 aa8.66□□□□□ -1.02
CDT1-203ENST00000569140 PSCAO43653 123 aa8.66□□□□□ -1.02
CDT1-203ENST00000569140 BTF3P20290 206 aaKnown RBP8.66□□□□□ -1.02
CDT1-203ENST00000569140 NIT1Q86X76 327 aa8.66□□□□□ -1.02
CDT1-203ENST00000569140 IGHV1-24A0A0C4DH33 117 aa8.65□□□□□ -1.02
CDT1-203ENST00000569140 ADCYAP1P18509 176 aa8.65□□□□□ -1.02
CDT1-203ENST00000569140 GAGE6Q13070 117 aa8.65□□□□□ -1.02
CDT1-203ENST00000569140 COTL1Q14019 142 aa8.65□□□□□ -1.02
CDT1-203ENST00000569140 ANAPC16Q96DE5 110 aa8.65□□□□□ -1.02
CDT1-203ENST00000569140 DNAH10Q8IVF4 4471 aa8.64□□□□□ -1.03
CDT1-203ENST00000569140 A0A1B0GW15 77 aa8.64□□□□□ -1.03
CDT1-203ENST00000569140 IBA57-AS1B1ANH7 110 aa8.64□□□□□ -1.03
CDT1-203ENST00000569140 SMKR1H3BMG3 65 aa8.64□□□□□ -1.03
CDT1-203ENST00000569140 UBE2L6O14933 153 aa8.64□□□□□ -1.03
CDT1-203ENST00000569140 NCR2O95944 276 aa8.64□□□□□ -1.03
CDT1-203ENST00000569140 S100A8P05109 93 aa8.64□□□□□ -1.03
CDT1-203ENST00000569140 RAB4AP20338 218 aa8.64□□□□□ -1.03
CDT1-203ENST00000569140 AMTP48728 403 aa8.64□□□□□ -1.03
CDT1-203ENST00000569140 HBBP68871 147 aa8.64□□□□□ -1.03
CDT1-203ENST00000569140 NTM-AS1Q6ZSK4 140 aa8.64□□□□□ -1.03
CDT1-203ENST00000569140 MRAP2Q96G30 205 aa8.64□□□□□ -1.03
CDT1-203ENST00000569140 RNF185Q96GF1 192 aa8.64□□□□□ -1.03
CDT1-203ENST00000569140 KLK12Q9UKR0 248 aa8.64□□□□□ -1.03
CDT1-203ENST00000569140 LINC00862A6NCI5 91 aa8.63□□□□□ -1.03
CDT1-203ENST00000569140 ANGP03950 147 aaKnown RBP8.63□□□□□ -1.03
CDT1-203ENST00000569140 PKIAP61925 76 aa8.63□□□□□ -1.03
CDT1-203ENST00000569140 ELOBQ15370 118 aa8.63□□□□□ -1.03
CDT1-203ENST00000569140 FRZBQ92765 325 aa8.63□□□□□ -1.03
CDT1-203ENST00000569140 TMEM243Q9BU79 118 aa8.63□□□□□ -1.03
CDT1-203ENST00000569140 ST20Q9HBF5 79 aa8.63□□□□□ -1.03
CDT1-203ENST00000569140 A0A1B0GVY2 172 aa8.62□□□□□ -1.03
CDT1-203ENST00000569140 SDHAF1A6NFY7 115 aa8.62□□□□□ -1.03
CDT1-203ENST00000569140 EREGO14944 169 aa8.62□□□□□ -1.03
CDT1-203ENST00000569140 GAS8-AS1O95177 125 aa8.62□□□□□ -1.03
CDT1-203ENST00000569140 CRPP02741 224 aa8.62□□□□□ -1.03
CDT1-203ENST00000569140 PMCHP20382 165 aa8.62□□□□□ -1.03
CDT1-203ENST00000569140 LAGE3Q14657 143 aa8.62□□□□□ -1.03
CDT1-203ENST00000569140 MPV17L2Q567V2 206 aa8.62□□□□□ -1.03
CDT1-203ENST00000569140 Q6ZRN7 208 aaPredicted RBP8.62□□□□□ -1.03
CDT1-203ENST00000569140 CHCHD7Q9BUK0 85 aa8.62□□□□□ -1.03
CDT1-203ENST00000569140 SEC11CQ9BY50 192 aa8.62□□□□□ -1.03
CDT1-203ENST00000569140 TRAV8-3A0A0A6YYJ7 113 aa8.61□□□□□ -1.03
CDT1-203ENST00000569140 APCSP02743 223 aa8.61□□□□□ -1.03
CDT1-203ENST00000569140 RPS10P46783 165 aaKnown RBP8.61□□□□□ -1.03
CDT1-203ENST00000569140 IQCJQ1A5X6 159 aa8.61□□□□□ -1.03
CDT1-203ENST00000569140 FAM104BQ5XKR9 115 aa8.61□□□□□ -1.03
CDT1-203ENST00000569140 ATRAIDQ6UW56 229 aa8.61□□□□□ -1.03
CDT1-203ENST00000569140 CLPSL2Q6UWE3 100 aa8.61□□□□□ -1.03
CDT1-203ENST00000569140 Q8N976 141 aa8.61□□□□□ -1.03
CDT1-203ENST00000569140 UBE2WQ96B02 151 aa8.61□□□□□ -1.03
CDT1-203ENST00000569140 DNAH2Q9P225 4427 aa8.6□□□□□ -1.03
CDT1-203ENST00000569140 IGKV2D-24A0A075B6R9 120 aa8.6□□□□□ -1.03
CDT1-203ENST00000569140 CKS2P33552 79 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms