RNA–Protein interactions for RNA: ENST00000569066.2

UBR1-208, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 1 (best)

Gene UBR1, Length 2,250 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-208ENST00000569066 TET1Q8NFU7 2136 aa3.24□□□□□ -1.89
UBR1-208ENST00000569066 A0A1W2PQD3 144 aa3.24□□□□□ -1.89
UBR1-208ENST00000569066 C9JCJ5 164 aa3.24□□□□□ -1.89
UBR1-208ENST00000569066 CCL8P80075 99 aa3.24□□□□□ -1.89
UBR1-208ENST00000569066 C1orf140Q5VVS0 124 aa3.24□□□□□ -1.89
UBR1-208ENST00000569066 LYPD5Q6UWN5 251 aa3.24□□□□□ -1.89
UBR1-208ENST00000569066 SERP2Q8N6R1 65 aa3.24□□□□□ -1.89
UBR1-208ENST00000569066 PFN4Q8NHR9 129 aa3.24□□□□□ -1.89
UBR1-208ENST00000569066 NABP2Q9BQ15 211 aa3.24□□□□□ -1.89
UBR1-208ENST00000569066 OSTCQ9NRP0 149 aa3.24□□□□□ -1.89
UBR1-208ENST00000569066 LHFPL6Q9Y693 200 aa3.24□□□□□ -1.89
UBR1-208ENST00000569066 CACNA1CQ13936 2221 aa3.24□□□□□ -1.89
UBR1-208ENST00000569066 C16orf90A8MZG2 172 aa3.23□□□□□ -1.89
UBR1-208ENST00000569066 FCER1GP30273 86 aa3.23□□□□□ -1.89
UBR1-208ENST00000569066 KISS1Q15726 138 aa3.23□□□□□ -1.89
UBR1-208ENST00000569066 OR8A1Q8NGG7 326 aa3.23□□□□□ -1.89
UBR1-208ENST00000569066 PRSS27Q9BQR3 290 aa3.23□□□□□ -1.89
UBR1-208ENST00000569066 PTPRDP23468 1912 aa3.23□□□□□ -1.89
UBR1-208ENST00000569066 ZNF831Q5JPB2 1677 aa3.23□□□□□ -1.89
UBR1-208ENST00000569066 TRBV7-6A0A0J9YX20 115 aa3.23□□□□□ -1.89
UBR1-208ENST00000569066 PIRTP0C851 137 aa3.23□□□□□ -1.89
UBR1-208ENST00000569066 UBE2D1P51668 147 aa3.23□□□□□ -1.89
UBR1-208ENST00000569066 UBE2L3P68036 154 aaKnown RBP3.23□□□□□ -1.89
UBR1-208ENST00000569066 RPL18Q07020 188 aaKnown RBP3.23□□□□□ -1.89
UBR1-208ENST00000569066 IGFL3Q6UXB1 125 aa3.23□□□□□ -1.89
UBR1-208ENST00000569066 ATP5L2Q7Z4Y8 100 aa3.23□□□□□ -1.89
UBR1-208ENST00000569066 Q8N2B8 174 aa3.23□□□□□ -1.89
UBR1-208ENST00000569066 ABHD14BQ96IU4 210 aa3.23□□□□□ -1.89
UBR1-208ENST00000569066 SEC16AO15027 2179 aa3.22□□□□□ -1.89
UBR1-208ENST00000569066 TRAV40A0A0B4J280 105 aa3.22□□□□□ -1.89
UBR1-208ENST00000569066 UPK2O00526 184 aa3.22□□□□□ -1.89
UBR1-208ENST00000569066 TIMM17BO60830 172 aa3.22□□□□□ -1.89
UBR1-208ENST00000569066 LINC01590Q5TEZ4 76 aa3.22□□□□□ -1.89
UBR1-208ENST00000569066 DEFB106AQ8N104 65 aa3.22□□□□□ -1.89
UBR1-208ENST00000569066 ZNF714Q96N38 554 aa3.22□□□□□ -1.89
UBR1-208ENST00000569066 TIMM9Q9Y5J7 89 aa3.22□□□□□ -1.89
UBR1-208ENST00000569066 NHSQ6T4R5 1651 aa3.22□□□□□ -1.89
UBR1-208ENST00000569066 PCNTO95613 3336 aa3.22□□□□□ -1.89
UBR1-208ENST00000569066 SPAG17Q6Q759 2223 aa3.22□□□□□ -1.89
UBR1-208ENST00000569066 TRBV7-1A0A0A6YYK4 115 aa3.22□□□□□ -1.89
UBR1-208ENST00000569066 UBE2L5PA0A1B0GUS4 154 aa3.22□□□□□ -1.89
UBR1-208ENST00000569066 TMEM14DPA8MWL7 114 aa3.22□□□□□ -1.89
UBR1-208ENST00000569066 H3BMM0 161 aa3.22□□□□□ -1.89
UBR1-208ENST00000569066 RNASE2P10153 161 aaKnown RBP3.22□□□□□ -1.89
UBR1-208ENST00000569066 PCBD1P61457 104 aa3.22□□□□□ -1.89
UBR1-208ENST00000569066 DEFB121Q5J5C9 76 aa3.22□□□□□ -1.89
UBR1-208ENST00000569066 CLLU1OSQ5K130 101 aa3.22□□□□□ -1.89
UBR1-208ENST00000569066 SDIM1Q6ZPB5 146 aa3.22□□□□□ -1.89
UBR1-208ENST00000569066 ITLN2Q8WWU7 325 aaPredicted RBP3.22□□□□□ -1.89
UBR1-208ENST00000569066 UBE2WQ96B02 151 aa3.22□□□□□ -1.89
UBR1-208ENST00000569066 ARHGAP5-AS1Q96IT6 56 aa3.22□□□□□ -1.89
UBR1-208ENST00000569066 MYOFQ9NZM1 2061 aa3.22□□□□□ -1.89
UBR1-208ENST00000569066 RPS27P42677 84 aaKnown RBP3.21□□□□□ -1.9
UBR1-208ENST00000569066 HBG2P69892 147 aa3.21□□□□□ -1.9
UBR1-208ENST00000569066 RBM3P98179 157 aaKnown RBP3.21□□□□□ -1.9
UBR1-208ENST00000569066 CENPWQ5EE01 88 aa3.21□□□□□ -1.9
UBR1-208ENST00000569066 KPRPQ5T749 579 aaPredicted RBP3.21□□□□□ -1.9
UBR1-208ENST00000569066 MYO7BQ6PIF6 2116 aa3.21□□□□□ -1.9
UBR1-208ENST00000569066 LINC00643Q86TS7 51 aa3.21□□□□□ -1.9
UBR1-208ENST00000569066 RMI2Q96E14 147 aa3.21□□□□□ -1.9
UBR1-208ENST00000569066 MGST2Q99735 147 aa3.21□□□□□ -1.9
UBR1-208ENST00000569066 COL11A1P12107 1806 aaPredicted RBP3.21□□□□□ -1.9
UBR1-208ENST00000569066 IGKV1D-43A0A0B4J1Z2 117 aa3.21□□□□□ -1.9
UBR1-208ENST00000569066 COX7A2P2O60397 106 aa3.21□□□□□ -1.9
UBR1-208ENST00000569066 CCKP06307 115 aa3.21□□□□□ -1.9
UBR1-208ENST00000569066 SPINT3P49223 89 aa3.21□□□□□ -1.9
UBR1-208ENST00000569066 FAM104BQ5XKR9 115 aa3.21□□□□□ -1.9
UBR1-208ENST00000569066 KTN1-AS1Q86SY8 53 aa3.21□□□□□ -1.9
UBR1-208ENST00000569066 TXNDC17Q9BRA2 123 aa3.21□□□□□ -1.9
UBR1-208ENST00000569066 SLC50A1Q9BRV3 221 aa3.21□□□□□ -1.9
UBR1-208ENST00000569066 BPESC1Q9GZL8 116 aa3.21□□□□□ -1.9
UBR1-208ENST00000569066 PLXNA2O75051 1894 aa3.21□□□□□ -1.9
UBR1-208ENST00000569066 KCPQ6ZWJ8 1503 aa3.2□□□□□ -1.9
UBR1-208ENST00000569066 IGHV3OR16-8A0A075B7F1 116 aa3.2□□□□□ -1.9
UBR1-208ENST00000569066 IQCF6A8MYZ5 107 aa3.2□□□□□ -1.9
UBR1-208ENST00000569066 H7BZZ5 65 aa3.2□□□□□ -1.9
UBR1-208ENST00000569066 M0R378 163 aa3.2□□□□□ -1.9
UBR1-208ENST00000569066 IGHG2P01859 326 aa3.2□□□□□ -1.9
UBR1-208ENST00000569066 TMEM170BQ5T4T1 132 aa3.2□□□□□ -1.9
UBR1-208ENST00000569066 C16orf47Q6ZP98 133 aaPredicted RBP3.2□□□□□ -1.9
UBR1-208ENST00000569066 NDUFA11Q86Y39 141 aa3.2□□□□□ -1.9
UBR1-208ENST00000569066 ZNF492Q9P255 531 aa3.2□□□□□ -1.9
UBR1-208ENST00000569066 HEATR5BQ9P2D3 2071 aa3.2□□□□□ -1.9
UBR1-208ENST00000569066 ZFHX3Q15911 3703 aa3.2□□□□□ -1.9
UBR1-208ENST00000569066 SRCAPQ6ZRS2 3230 aa3.2□□□□□ -1.9
UBR1-208ENST00000569066 IGLV2-18A0A075B6J9 118 aa3.19□□□□□ -1.9
UBR1-208ENST00000569066 HIGD1CA8MV81 97 aa3.19□□□□□ -1.9
UBR1-208ENST00000569066 C4orf51C9J302 202 aa3.19□□□□□ -1.9
UBR1-208ENST00000569066 ARL14EPLP0DKL9 152 aa3.19□□□□□ -1.9
UBR1-208ENST00000569066 FXYD4P59646 89 aa3.19□□□□□ -1.9
UBR1-208ENST00000569066 S100A7L2Q5SY68 101 aa3.19□□□□□ -1.9
UBR1-208ENST00000569066 MDC1Q14676 2089 aaKnown RBP3.19□□□□□ -1.9
UBR1-208ENST00000569066 MED12Q93074 2177 aa3.19□□□□□ -1.9
UBR1-208ENST00000569066 TRBV19A0A075B6N1 114 aa3.19□□□□□ -1.9
UBR1-208ENST00000569066 IGHV1-58A0A0C4DH39 117 aa3.19□□□□□ -1.9
UBR1-208ENST00000569066 FAM223BA6NKX1 122 aa3.19□□□□□ -1.9
UBR1-208ENST00000569066 C17orf51A8MQB3 221 aa3.19□□□□□ -1.9
UBR1-208ENST00000569066 IFI6P09912 130 aa3.19□□□□□ -1.9
UBR1-208ENST00000569066 IAPPP10997 89 aa3.19□□□□□ -1.9
UBR1-208ENST00000569066 FXYD7P58549 80 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms