RNA–Protein interactions for RNA: ENST00000568814.1

HERPUD1-216, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 509 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-216ENST00000568814 TGIF2-C20orf24A0A0A6YYL0 155 aa7.13□□□□□ -1.27
HERPUD1-216ENST00000568814 SRIP30626 198 aa7.13□□□□□ -1.27
HERPUD1-216ENST00000568814 MRPL51Q4U2R6 128 aaKnown RBP7.13□□□□□ -1.27
HERPUD1-216ENST00000568814 TMEM136Q6ZRR5 245 aa7.13□□□□□ -1.27
HERPUD1-216ENST00000568814 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.13□□□□□ -1.27
HERPUD1-216ENST00000568814 YPEL4Q96NS1 127 aa7.13□□□□□ -1.27
HERPUD1-216ENST00000568814 NIT2Q9NQR4 276 aa7.13□□□□□ -1.27
HERPUD1-216ENST00000568814 TRBV7-3A0A075B6L6 115 aa7.12□□□□□ -1.27
HERPUD1-216ENST00000568814 TRAV26-2A0A0B4J265 109 aa7.12□□□□□ -1.27
HERPUD1-216ENST00000568814 NUDT3O95989 172 aa7.12□□□□□ -1.27
HERPUD1-216ENST00000568814 CKS2P33552 79 aa7.12□□□□□ -1.27
HERPUD1-216ENST00000568814 CASC10Q5T4H9 136 aa7.12□□□□□ -1.27
HERPUD1-216ENST00000568814 NEGR1Q7Z3B1 354 aa7.12□□□□□ -1.27
HERPUD1-216ENST00000568814 NEXN-AS1Q8NBZ9 246 aa7.12□□□□□ -1.27
HERPUD1-216ENST00000568814 TNFRSF18Q9Y5U5 241 aa7.12□□□□□ -1.27
HERPUD1-216ENST00000568814 A0A096LPF7 62 aa7.11□□□□□ -1.27
HERPUD1-216ENST00000568814 TRBV6-5A0A0K0K1A5 114 aa7.11□□□□□ -1.27
HERPUD1-216ENST00000568814 LOC100131303A0A0U1RQF7 123 aa7.11□□□□□ -1.27
HERPUD1-216ENST00000568814 GAGE12JA6NER3 117 aa7.11□□□□□ -1.27
HERPUD1-216ENST00000568814 PHOX2AO14813 284 aa7.11□□□□□ -1.27
HERPUD1-216ENST00000568814 APCSP02743 223 aa7.11□□□□□ -1.27
HERPUD1-216ENST00000568814 P0DMU3 169 aa7.11□□□□□ -1.27
HERPUD1-216ENST00000568814 FAM231AP0DMU4 169 aa7.11□□□□□ -1.27
HERPUD1-216ENST00000568814 FAM231CP0DMU5 169 aa7.11□□□□□ -1.27
HERPUD1-216ENST00000568814 LINC00694P0DN24 101 aa7.11□□□□□ -1.27
HERPUD1-216ENST00000568814 GAGE1Q13065 139 aa7.11□□□□□ -1.27
HERPUD1-216ENST00000568814 GAGE4Q13068 117 aa7.11□□□□□ -1.27
HERPUD1-216ENST00000568814 GAGE5Q13069 117 aa7.11□□□□□ -1.27
HERPUD1-216ENST00000568814 GAGE13Q4V321 117 aa7.11□□□□□ -1.27
HERPUD1-216ENST00000568814 OR10J3Q5JRS4 329 aa7.11□□□□□ -1.27
HERPUD1-216ENST00000568814 ORMDL3Q8N138 153 aa7.11□□□□□ -1.27
HERPUD1-216ENST00000568814 APLNQ9ULZ1 77 aa7.11□□□□□ -1.27
HERPUD1-216ENST00000568814 LAMTOR2Q9Y2Q5 125 aa7.11□□□□□ -1.27
HERPUD1-216ENST00000568814 SACSQ9NZJ4 4579 aa7.1□□□□□ -1.27
HERPUD1-216ENST00000568814 D6R8Y8 96 aa7.1□□□□□ -1.27
HERPUD1-216ENST00000568814 TIRAPP58753 221 aa7.1□□□□□ -1.27
HERPUD1-216ENST00000568814 UBE2D3P61077 147 aa7.1□□□□□ -1.27
HERPUD1-216ENST00000568814 UBE2D2P62837 147 aa7.1□□□□□ -1.27
HERPUD1-216ENST00000568814 DAZ4Q86SG3 579 aaKnown RBP7.1□□□□□ -1.27
HERPUD1-216ENST00000568814 ATP6V0E2Q8NHE4 81 aa7.1□□□□□ -1.27
HERPUD1-216ENST00000568814 ZNRF2Q8NHG8 242 aa7.1□□□□□ -1.27
HERPUD1-216ENST00000568814 ST20Q9HBF5 79 aa7.1□□□□□ -1.27
HERPUD1-216ENST00000568814 DAZ3Q9NR90 486 aaKnown RBP7.1□□□□□ -1.27
HERPUD1-216ENST00000568814 SCO1O75880 301 aa7.09□□□□□ -1.27
HERPUD1-216ENST00000568814 NCR2O95944 276 aa7.09□□□□□ -1.27
HERPUD1-216ENST00000568814 TMEM97Q5BJF2 176 aa7.09□□□□□ -1.27
HERPUD1-216ENST00000568814 RPL39LQ96EH5 51 aaKnown RBP7.09□□□□□ -1.27
HERPUD1-216ENST00000568814 PRELID3AQ96N28 172 aa7.09□□□□□ -1.27
HERPUD1-216ENST00000568814 C20orf78Q9BR46 151 aa7.09□□□□□ -1.27
HERPUD1-216ENST00000568814 MRPL18Q9H0U6 180 aaKnown RBP7.09□□□□□ -1.27
HERPUD1-216ENST00000568814 TRAPPC1Q9Y5R8 145 aa7.09□□□□□ -1.27
HERPUD1-216ENST00000568814 SDHAF1A6NFY7 115 aa7.08□□□□□ -1.28
HERPUD1-216ENST00000568814 COLCA2A8K830 154 aa7.08□□□□□ -1.28
HERPUD1-216ENST00000568814 SMKR1H3BMG3 65 aa7.08□□□□□ -1.28
HERPUD1-216ENST00000568814 TNFRSF6BO95407 300 aa7.08□□□□□ -1.28
HERPUD1-216ENST00000568814 RPS10P46783 165 aaKnown RBP7.08□□□□□ -1.28
HERPUD1-216ENST00000568814 CCL18P55774 89 aa7.08□□□□□ -1.28
HERPUD1-216ENST00000568814 SUMO2P61956 95 aaKnown RBP7.08□□□□□ -1.28
HERPUD1-216ENST00000568814 RPL32P62910 135 aaKnown RBP7.08□□□□□ -1.28
HERPUD1-216ENST00000568814 FABP9Q0Z7S8 132 aa7.08□□□□□ -1.28
HERPUD1-216ENST00000568814 NRACQ8N912 160 aa7.08□□□□□ -1.28
HERPUD1-216ENST00000568814 GTSF1LQ9H1H1 148 aa7.08□□□□□ -1.28
HERPUD1-216ENST00000568814 Q9UF83 564 aa7.08□□□□□ -1.28
HERPUD1-216ENST00000568814 PCLOQ9Y6V0 5065 aa7.07□□□□□ -1.28
HERPUD1-216ENST00000568814 GAS8-AS1O95177 125 aa7.07□□□□□ -1.28
HERPUD1-216ENST00000568814 RAB5AP20339 215 aa7.07□□□□□ -1.28
HERPUD1-216ENST00000568814 I3L3M4 83 aa7.06□□□□□ -1.28
HERPUD1-216ENST00000568814 VCYO14598 125 aa7.06□□□□□ -1.28
HERPUD1-216ENST00000568814 TCAPO15273 167 aa7.06□□□□□ -1.28
HERPUD1-216ENST00000568814 NPYP01303 97 aa7.06□□□□□ -1.28
HERPUD1-216ENST00000568814 POLR2KP53803 58 aaKnown RBP7.06□□□□□ -1.28
HERPUD1-216ENST00000568814 COTL1Q14019 142 aa7.06□□□□□ -1.28
HERPUD1-216ENST00000568814 LYPD5Q6UWN5 251 aa7.06□□□□□ -1.28
HERPUD1-216ENST00000568814 UBE2DNLQ8IWF7 75 aa7.06□□□□□ -1.28
HERPUD1-216ENST00000568814 KIR2DL4Q99706 377 aa7.06□□□□□ -1.28
HERPUD1-216ENST00000568814 TMEM70Q9BUB7 260 aa7.06□□□□□ -1.28
HERPUD1-216ENST00000568814 MAP1LC3AQ9H492 121 aa7.06□□□□□ -1.28
HERPUD1-216ENST00000568814 MRPS16Q9Y3D3 137 aaKnown RBP7.06□□□□□ -1.28
HERPUD1-216ENST00000568814 TENM2Q9NT68 2774 aa7.05□□□□□ -1.28
HERPUD1-216ENST00000568814 DNAH7Q8WXX0 4024 aa7.05□□□□□ -1.28
HERPUD1-216ENST00000568814 TRBV27A0A0K0K1C4 114 aa7.05□□□□□ -1.28
HERPUD1-216ENST00000568814 PRSS47A8MTI9 375 aa7.05□□□□□ -1.28
HERPUD1-216ENST00000568814 PMCHP20382 165 aa7.05□□□□□ -1.28
HERPUD1-216ENST00000568814 ESRGQ1W209 222 aa7.05□□□□□ -1.28
HERPUD1-216ENST00000568814 KIAA1644Q3SXP7 199 aa7.05□□□□□ -1.28
HERPUD1-216ENST00000568814 LELP1Q5T871 98 aa7.05□□□□□ -1.28
HERPUD1-216ENST00000568814 LGALS9CQ6DKI2 356 aa7.05□□□□□ -1.28
HERPUD1-216ENST00000568814 ALKBH7Q9BT30 221 aaPredicted RBP7.05□□□□□ -1.28
HERPUD1-216ENST00000568814 SMIM2Q9BVW6 85 aa7.05□□□□□ -1.28
HERPUD1-216ENST00000568814 DNAH1Q9P2D7 4330 aa7.04□□□□□ -1.28
HERPUD1-216ENST00000568814 TRBV25-1A0A075B6N4 114 aa7.04□□□□□ -1.28
HERPUD1-216ENST00000568814 TRBV6-8A0A0A6YYG3 113 aa7.04□□□□□ -1.28
HERPUD1-216ENST00000568814 TRAV8-6A0A0B4J262 113 aa7.04□□□□□ -1.28
HERPUD1-216ENST00000568814 IGHV3-38A0A0C4DH36 116 aa7.04□□□□□ -1.28
HERPUD1-216ENST00000568814 UPK3BQ9BT76 320 aa7.04□□□□□ -1.28
HERPUD1-216ENST00000568814 NXT2Q9NPJ8 142 aaKnown RBP7.04□□□□□ -1.28
HERPUD1-216ENST00000568814 LINC00588Q9Y4M8 146 aa7.04□□□□□ -1.28
HERPUD1-216ENST00000568814 IGHV1-24A0A0C4DH33 117 aa7.03□□□□□ -1.28
HERPUD1-216ENST00000568814 K7EMI3 77 aa7.03□□□□□ -1.28
HERPUD1-216ENST00000568814 FCER1GP30273 86 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 165.2 ms