RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.1□□□□□ -0.79
HERPUD1-215ENST00000568676 CXCL1P09341 107 aa10.09□□□□□ -0.79
HERPUD1-215ENST00000568676 UBE2G2P60604 165 aa10.09□□□□□ -0.79
HERPUD1-215ENST00000568676 CNBPP62633 177 aaKnown RBP10.09□□□□□ -0.79
HERPUD1-215ENST00000568676 ZNF56Q15929 161 aa10.09□□□□□ -0.79
HERPUD1-215ENST00000568676 VAX2Q9UIW0 290 aa10.09□□□□□ -0.79
HERPUD1-215ENST00000568676 LTAP01374 205 aa10.08□□□□□ -0.8
HERPUD1-215ENST00000568676 KCNRGQ8N5I3 272 aa10.08□□□□□ -0.8
HERPUD1-215ENST00000568676 ZNF471Q9BX82 626 aaPredicted RBP10.08□□□□□ -0.8
HERPUD1-215ENST00000568676 TMSB15BA0A087X1C1 80 aa10.07□□□□□ -0.8
HERPUD1-215ENST00000568676 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.07□□□□□ -0.8
HERPUD1-215ENST00000568676 FHITP49789 147 aa10.07□□□□□ -0.8
HERPUD1-215ENST00000568676 ZNF726P1Q15940 193 aa10.07□□□□□ -0.8
HERPUD1-215ENST00000568676 TRBV25-1A0A075B6N4 114 aa10.06□□□□□ -0.8
HERPUD1-215ENST00000568676 KANTRA0A1W2PQU2 76 aa10.06□□□□□ -0.8
HERPUD1-215ENST00000568676 RBX1P62877 108 aa10.06□□□□□ -0.8
HERPUD1-215ENST00000568676 EIF5AP63241 154 aaKnown RBP10.06□□□□□ -0.8
HERPUD1-215ENST00000568676 KRTAP26-1Q6PEX3 210 aa10.06□□□□□ -0.8
HERPUD1-215ENST00000568676 LINC00269Q8N2A0 174 aa10.06□□□□□ -0.8
HERPUD1-215ENST00000568676 IGHV3-64A0A075B6Q5 118 aa10.05□□□□□ -0.8
HERPUD1-215ENST00000568676 TRAV8-4A0A0B4J246 113 aa10.05□□□□□ -0.8
HERPUD1-215ENST00000568676 PANO1I0J062 215 aa10.05□□□□□ -0.8
HERPUD1-215ENST00000568676 P01737 135 aa10.05□□□□□ -0.8
HERPUD1-215ENST00000568676 AKR1C8PQ5T2L2 129 aa10.05□□□□□ -0.8
HERPUD1-215ENST00000568676 TCTE3Q8IZS6 198 aa10.05□□□□□ -0.8
HERPUD1-215ENST00000568676 DERL1Q9BUN8 251 aa10.05□□□□□ -0.8
HERPUD1-215ENST00000568676 AP5S1Q9NUS5 200 aa10.05□□□□□ -0.8
HERPUD1-215ENST00000568676 SNAI2O43623 268 aa10.04□□□□□ -0.8
HERPUD1-215ENST00000568676 PFDN1O60925 122 aa10.04□□□□□ -0.8
HERPUD1-215ENST00000568676 S100A9P06702 114 aaKnown RBP10.04□□□□□ -0.8
HERPUD1-215ENST00000568676 OR5AL1P0C617 328 aa10.04□□□□□ -0.8
HERPUD1-215ENST00000568676 GZMBP10144 247 aa10.04□□□□□ -0.8
HERPUD1-215ENST00000568676 IQCJQ1A5X6 159 aa10.04□□□□□ -0.8
HERPUD1-215ENST00000568676 NTM-AS1Q6ZSK4 140 aa10.04□□□□□ -0.8
HERPUD1-215ENST00000568676 OR10AG1Q8NH19 301 aa10.04□□□□□ -0.8
HERPUD1-215ENST00000568676 DPH3Q96FX2 82 aa10.04□□□□□ -0.8
HERPUD1-215ENST00000568676 SSBP4Q9BWG4 385 aaPredicted RBP10.04□□□□□ -0.8
HERPUD1-215ENST00000568676 DPH3P1Q9H4G8 78 aa10.04□□□□□ -0.8
HERPUD1-215ENST00000568676 CYTL1Q9NRR1 136 aa10.04□□□□□ -0.8
HERPUD1-215ENST00000568676 F5H697 171 aa10.03□□□□□ -0.8
HERPUD1-215ENST00000568676 BCL2L11O43521 198 aa10.03□□□□□ -0.8
HERPUD1-215ENST00000568676 SMIM17P0DL12 118 aa10.03□□□□□ -0.8
HERPUD1-215ENST00000568676 AKR1C3P42330 323 aa10.03□□□□□ -0.8
HERPUD1-215ENST00000568676 REG3AQ06141 175 aa10.03□□□□□ -0.8
HERPUD1-215ENST00000568676 SPANXN1Q5VSR9 72 aa10.03□□□□□ -0.8
HERPUD1-215ENST00000568676 AKAP14Q86UN6 197 aa10.03□□□□□ -0.8
HERPUD1-215ENST00000568676 STOML3Q8TAV4 291 aa10.03□□□□□ -0.8
HERPUD1-215ENST00000568676 hCG_2014768A0A024R1R8 64 aa10.02□□□□□ -0.81
HERPUD1-215ENST00000568676 IGHV1-24A0A0C4DH33 117 aa10.02□□□□□ -0.81
HERPUD1-215ENST00000568676 hDV102S1A0JD36 115 aa10.02□□□□□ -0.81
HERPUD1-215ENST00000568676 MAP1LC3B2A6NCE7 125 aa10.02□□□□□ -0.81
HERPUD1-215ENST00000568676 GAGE6Q13070 117 aa10.02□□□□□ -0.81
HERPUD1-215ENST00000568676 CLPSL2Q6UWE3 100 aa10.02□□□□□ -0.81
HERPUD1-215ENST00000568676 MAP1LC3BQ9GZQ8 125 aa10.02□□□□□ -0.81
HERPUD1-215ENST00000568676 A0A087WYN8 130 aa10.01□□□□□ -0.81
HERPUD1-215ENST00000568676 A0A1B0GUV1 79 aa10.01□□□□□ -0.81
HERPUD1-215ENST00000568676 CST9LP1Q5W188 147 aa10.01□□□□□ -0.81
HERPUD1-215ENST00000568676 TMUB2Q71RG4 321 aa10.01□□□□□ -0.81
HERPUD1-215ENST00000568676 SPACA4Q8TDM5 124 aa10.01□□□□□ -0.81
HERPUD1-215ENST00000568676 C7orf33Q8WU49 177 aa10.01□□□□□ -0.81
HERPUD1-215ENST00000568676 AP1S3Q96PC3 154 aa10.01□□□□□ -0.81
HERPUD1-215ENST00000568676 UMAD1C9J7I0 102 aa10□□□□□ -0.81
HERPUD1-215ENST00000568676 H7C1H1 209 aa10□□□□□ -0.81
HERPUD1-215ENST00000568676 PLAC8Q9NZF1 115 aa10□□□□□ -0.81
HERPUD1-215ENST00000568676 IGLV10-54A0A075B6I4 117 aa9.98□□□□□ -0.81
HERPUD1-215ENST00000568676 EIF5AL1Q6IS14 154 aaKnown RBP9.98□□□□□ -0.81
HERPUD1-215ENST00000568676 LINC01600Q96MT4 127 aa9.98□□□□□ -0.81
HERPUD1-215ENST00000568676 MLST8Q9BVC4 326 aa9.98□□□□□ -0.81
HERPUD1-215ENST00000568676 KIF25-AS1Q9Y6Z4 181 aa9.98□□□□□ -0.81
HERPUD1-215ENST00000568676 WDR73Q6P4I2 378 aa9.97□□□□□ -0.81
HERPUD1-215ENST00000568676 CFAP161Q6P656 301 aa9.97□□□□□ -0.81
HERPUD1-215ENST00000568676 C20orf203Q8NBC4 194 aa9.97□□□□□ -0.81
HERPUD1-215ENST00000568676 M0QY20 66 aa9.96□□□□□ -0.82
HERPUD1-215ENST00000568676 BAGE2Q86Y30 109 aa9.96□□□□□ -0.82
HERPUD1-215ENST00000568676 PGLYRP4Q96LB8 373 aa9.96□□□□□ -0.82
HERPUD1-215ENST00000568676 TMEM243Q9BU79 118 aa9.96□□□□□ -0.82
HERPUD1-215ENST00000568676 PHOX2AO14813 284 aa9.95□□□□□ -0.82
HERPUD1-215ENST00000568676 PAGE4O60829 102 aa9.95□□□□□ -0.82
HERPUD1-215ENST00000568676 SLPIP03973 132 aa9.95□□□□□ -0.82
HERPUD1-215ENST00000568676 MUC21A0A0G2JKD1 596 aa9.94□□□□□ -0.82
HERPUD1-215ENST00000568676 MUC21A0A140T8X8 626 aa9.94□□□□□ -0.82
HERPUD1-215ENST00000568676 CHTF8P0CG12 524 aa9.94□□□□□ -0.82
HERPUD1-215ENST00000568676 RAB5CP51148 216 aa9.94□□□□□ -0.82
HERPUD1-215ENST00000568676 SLC51BQ86UW2 128 aa9.94□□□□□ -0.82
HERPUD1-215ENST00000568676 FAM213BQ8TBF2 198 aa9.94□□□□□ -0.82
HERPUD1-215ENST00000568676 LRP2P98164 4655 aa9.94□□□□□ -0.82
HERPUD1-215ENST00000568676 TNXBP22105 4242 aa9.93□□□□□ -0.82
HERPUD1-215ENST00000568676 UBE2L6O14933 153 aa9.93□□□□□ -0.82
HERPUD1-215ENST00000568676 NDUFS6O75380 124 aaKnown RBP9.93□□□□□ -0.82
HERPUD1-215ENST00000568676 RPS10P46783 165 aaKnown RBP9.93□□□□□ -0.82
HERPUD1-215ENST00000568676 IGLV4-60A0A075B6I1 120 aa9.92□□□□□ -0.82
HERPUD1-215ENST00000568676 SCO2A0A1W2PP80 73 aa9.92□□□□□ -0.82
HERPUD1-215ENST00000568676 MGPP08493 103 aa9.92□□□□□ -0.82
HERPUD1-215ENST00000568676 H2AFB1P0C5Y9 115 aa9.92□□□□□ -0.82
HERPUD1-215ENST00000568676 SULT1A2P50226 295 aa9.92□□□□□ -0.82
HERPUD1-215ENST00000568676 SFT2D1Q8WV19 159 aa9.92□□□□□ -0.82
HERPUD1-215ENST00000568676 MBD3L1Q8WWY6 194 aa9.92□□□□□ -0.82
HERPUD1-215ENST00000568676 PKIGQ9Y2B9 76 aa9.92□□□□□ -0.82
HERPUD1-215ENST00000568676 A0A1B0GVG6 124 aa9.91□□□□□ -0.82
HERPUD1-215ENST00000568676 TEX46H3BTG2 121 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms