RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 IGLV10-54A0A075B6I4 117 aa7.43□□□□□ -1.22
GTF3C1-209ENST00000568569 TRBV25-1A0A075B6N4 114 aa7.43□□□□□ -1.22
GTF3C1-209ENST00000568569 TRAV8-4A0A0B4J246 113 aa7.43□□□□□ -1.22
GTF3C1-209ENST00000568569 INMT-MINDY4F8WBC2 141 aa7.43□□□□□ -1.22
GTF3C1-209ENST00000568569 SSNA1O43805 119 aa7.43□□□□□ -1.22
GTF3C1-209ENST00000568569 P01737 135 aa7.43□□□□□ -1.22
GTF3C1-209ENST00000568569 SLPIP03973 132 aa7.43□□□□□ -1.22
GTF3C1-209ENST00000568569 PRR3P79522 188 aaKnown RBP7.43□□□□□ -1.22
GTF3C1-209ENST00000568569 SERF2P84101 59 aa7.43□□□□□ -1.22
GTF3C1-209ENST00000568569 REG3AQ06141 175 aa7.43□□□□□ -1.22
GTF3C1-209ENST00000568569 VAX2Q9UIW0 290 aa7.43□□□□□ -1.22
GTF3C1-209ENST00000568569 TRBV6-1A0A0K0K1D8 114 aa7.42□□□□□ -1.22
GTF3C1-209ENST00000568569 ATP6V0CP27449 155 aa7.42□□□□□ -1.22
GTF3C1-209ENST00000568569 ZNF674Q2M3X9 581 aa7.42□□□□□ -1.22
GTF3C1-209ENST00000568569 GTSF1Q8WW33 167 aa7.42□□□□□ -1.22
GTF3C1-209ENST00000568569 DERL1Q9BUN8 251 aa7.42□□□□□ -1.22
GTF3C1-209ENST00000568569 NKX6-2Q9C056 277 aaPredicted RBP7.42□□□□□ -1.22
GTF3C1-209ENST00000568569 TNFSF18Q9UNG2 199 aa7.42□□□□□ -1.22
GTF3C1-209ENST00000568569 GZMBP10144 247 aa7.41□□□□□ -1.22
GTF3C1-209ENST00000568569 KRTAP10-8P60410 259 aa7.41□□□□□ -1.22
GTF3C1-209ENST00000568569 UBE2G2P60604 165 aa7.41□□□□□ -1.22
GTF3C1-209ENST00000568569 IQCJQ1A5X6 159 aa7.41□□□□□ -1.22
GTF3C1-209ENST00000568569 REG3GQ6UW15 175 aa7.41□□□□□ -1.22
GTF3C1-209ENST00000568569 FMC1Q96HJ9 113 aa7.41□□□□□ -1.22
GTF3C1-209ENST00000568569 IGHV1-24A0A0C4DH33 117 aa7.4□□□□□ -1.22
GTF3C1-209ENST00000568569 F5H697 171 aa7.4□□□□□ -1.22
GTF3C1-209ENST00000568569 UBE2G1P62253 170 aa7.4□□□□□ -1.22
GTF3C1-209ENST00000568569 OR10AG1Q8NH19 301 aa7.4□□□□□ -1.22
GTF3C1-209ENST00000568569 ZNF471Q9BX82 626 aaPredicted RBP7.4□□□□□ -1.22
GTF3C1-209ENST00000568569 FAM74A7A6NL05 159 aa7.39□□□□□ -1.23
GTF3C1-209ENST00000568569 LTAP01374 205 aa7.39□□□□□ -1.23
GTF3C1-209ENST00000568569 COX6A2Q02221 97 aa7.39□□□□□ -1.23
GTF3C1-209ENST00000568569 MAJINQ3KP22 176 aa7.39□□□□□ -1.23
GTF3C1-209ENST00000568569 SPINK6Q6UWN8 80 aa7.39□□□□□ -1.23
GTF3C1-209ENST00000568569 C20orf203Q8NBC4 194 aa7.39□□□□□ -1.23
GTF3C1-209ENST00000568569 MARVELD1Q9BSK0 173 aa7.39□□□□□ -1.23
GTF3C1-209ENST00000568569 CTXND1A0A1B0GTU2 59 aa7.38□□□□□ -1.23
GTF3C1-209ENST00000568569 NDUFS6O75380 124 aaKnown RBP7.38□□□□□ -1.23
GTF3C1-209ENST00000568569 CXCL1P09341 107 aa7.38□□□□□ -1.23
GTF3C1-209ENST00000568569 RAB5CP51148 216 aa7.38□□□□□ -1.23
GTF3C1-209ENST00000568569 ZNF726P1Q15940 193 aa7.38□□□□□ -1.23
GTF3C1-209ENST00000568569 SPANXN1Q5VSR9 72 aa7.38□□□□□ -1.23
GTF3C1-209ENST00000568569 IGKV2-24A0A0C4DH68 120 aa7.37□□□□□ -1.23
GTF3C1-209ENST00000568569 A0A1B0GUV1 79 aa7.37□□□□□ -1.23
GTF3C1-209ENST00000568569 SNAI2O43623 268 aa7.37□□□□□ -1.23
GTF3C1-209ENST00000568569 SMIM17P0DL12 118 aa7.37□□□□□ -1.23
GTF3C1-209ENST00000568569 RPS10P46783 165 aaKnown RBP7.37□□□□□ -1.23
GTF3C1-209ENST00000568569 CFAP161Q6P656 301 aa7.37□□□□□ -1.23
GTF3C1-209ENST00000568569 STPG4Q8N801 248 aa7.37□□□□□ -1.23
GTF3C1-209ENST00000568569 AQP10Q96PS8 301 aa7.37□□□□□ -1.23
GTF3C1-209ENST00000568569 TCEAL7Q9BRU2 100 aa7.37□□□□□ -1.23
GTF3C1-209ENST00000568569 SSBP4Q9BWG4 385 aaPredicted RBP7.37□□□□□ -1.23
GTF3C1-209ENST00000568569 LPAP08519 4548 aa7.36□□□□□ -1.23
GTF3C1-209ENST00000568569 IGLV4-60A0A075B6I1 120 aa7.36□□□□□ -1.23
GTF3C1-209ENST00000568569 OR5AL1P0C617 328 aa7.36□□□□□ -1.23
GTF3C1-209ENST00000568569 DEFA1P59665 94 aa7.36□□□□□ -1.23
GTF3C1-209ENST00000568569 DEFA3P59666 94 aa7.36□□□□□ -1.23
GTF3C1-209ENST00000568569 C15orf56Q8N910 161 aa7.36□□□□□ -1.23
GTF3C1-209ENST00000568569 PRSS3P2Q8NHM4 247 aa7.36□□□□□ -1.23
GTF3C1-209ENST00000568569 LYPD6BQ8NI32 183 aa7.36□□□□□ -1.23
GTF3C1-209ENST00000568569 AP1S3Q96PC3 154 aa7.36□□□□□ -1.23
GTF3C1-209ENST00000568569 TMEM243Q9BU79 118 aa7.36□□□□□ -1.23
GTF3C1-209ENST00000568569 GFRA4Q9GZZ7 299 aa7.36□□□□□ -1.23
GTF3C1-209ENST00000568569 ALG5Q9Y673 324 aa7.36□□□□□ -1.23
GTF3C1-209ENST00000568569 MUC21A0A0G2JKD1 596 aa7.35□□□□□ -1.23
GTF3C1-209ENST00000568569 MUC21A0A140T8X8 626 aa7.35□□□□□ -1.23
GTF3C1-209ENST00000568569 AKR1C3P42330 323 aa7.35□□□□□ -1.23
GTF3C1-209ENST00000568569 SULT1A2P50226 295 aa7.35□□□□□ -1.23
GTF3C1-209ENST00000568569 H7C1H1 209 aa7.34□□□□□ -1.23
GTF3C1-209ENST00000568569 M0QY20 66 aa7.34□□□□□ -1.23
GTF3C1-209ENST00000568569 SSTP61278 116 aa7.34□□□□□ -1.23
GTF3C1-209ENST00000568569 HIGD2BQ4VC39 106 aa7.34□□□□□ -1.23
GTF3C1-209ENST00000568569 LINC00474Q9P2X8 69 aa7.34□□□□□ -1.23
GTF3C1-209ENST00000568569 GAGE12HA6NDE8 117 aa7.33□□□□□ -1.24
GTF3C1-209ENST00000568569 UBE2L6O14933 153 aa7.33□□□□□ -1.24
GTF3C1-209ENST00000568569 FHITP49789 147 aa7.33□□□□□ -1.24
GTF3C1-209ENST00000568569 SRSF9Q13242 221 aaKnown RBP eCLIP7.33□□□□□ -1.24
GTF3C1-209ENST00000568569 CST9LP1Q5W188 147 aa7.33□□□□□ -1.24
GTF3C1-209ENST00000568569 STOML3Q8TAV4 291 aa7.33□□□□□ -1.24
GTF3C1-209ENST00000568569 A0A096LNI7 61 aa7.32□□□□□ -1.24
GTF3C1-209ENST00000568569 BORCS7-ASMTA0A0B4J1R7 106 aa7.32□□□□□ -1.24
GTF3C1-209ENST00000568569 MAP1LC3B2A6NCE7 125 aa7.32□□□□□ -1.24
GTF3C1-209ENST00000568569 MGPP08493 103 aa7.32□□□□□ -1.24
GTF3C1-209ENST00000568569 NKX2-5P52952 324 aaPredicted RBP7.32□□□□□ -1.24
GTF3C1-209ENST00000568569 AKR1C8PQ5T2L2 129 aa7.32□□□□□ -1.24
GTF3C1-209ENST00000568569 RPL7L1Q6DKI1 246 aaKnown RBP7.32□□□□□ -1.24
GTF3C1-209ENST00000568569 Q6ZRP5 223 aa7.32□□□□□ -1.24
GTF3C1-209ENST00000568569 PGLYRP4Q96LB8 373 aa7.32□□□□□ -1.24
GTF3C1-209ENST00000568569 MAP1LC3BQ9GZQ8 125 aa7.32□□□□□ -1.24
GTF3C1-209ENST00000568569 PKIGQ9Y2B9 76 aa7.32□□□□□ -1.24
GTF3C1-209ENST00000568569 GVQW2A0A096LPI5 108 aaPredicted RBP7.31□□□□□ -1.24
GTF3C1-209ENST00000568569 S100A9P06702 114 aaKnown RBP7.31□□□□□ -1.24
GTF3C1-209ENST00000568569 SUMO4Q6EEV6 95 aa7.31□□□□□ -1.24
GTF3C1-209ENST00000568569 INO80EQ8NBZ0 244 aaPredicted RBP7.31□□□□□ -1.24
GTF3C1-209ENST00000568569 IGKV3OR2-268A0A0C4DH90 116 aa7.3□□□□□ -1.24
GTF3C1-209ENST00000568569 MLST8Q9BVC4 326 aa7.3□□□□□ -1.24
GTF3C1-209ENST00000568569 FAM231BA6NCW3 169 aa7.29□□□□□ -1.24
GTF3C1-209ENST00000568569 AMTP48728 403 aa7.29□□□□□ -1.24
GTF3C1-209ENST00000568569 COTL1Q14019 142 aa7.29□□□□□ -1.24
GTF3C1-209ENST00000568569 RASL11AQ6T310 242 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms