RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 A0A096LNJ9 63 aa10.6□□□□□ -0.71
COMMD4-221ENST00000567935 F5H697 171 aa10.6□□□□□ -0.71
COMMD4-221ENST00000567935 C3orf84H3BNL1 204 aa10.6□□□□□ -0.71
COMMD4-221ENST00000567935 HTN1P15515 57 aa10.6□□□□□ -0.71
COMMD4-221ENST00000567935 DEFB121Q5J5C9 76 aa10.6□□□□□ -0.71
COMMD4-221ENST00000567935 SUMO4Q6EEV6 95 aa10.6□□□□□ -0.71
COMMD4-221ENST00000567935 TMEM263Q8WUH6 116 aaKnown RBP10.6□□□□□ -0.71
COMMD4-221ENST00000567935 VAMP8Q9BV40 100 aa10.6□□□□□ -0.71
COMMD4-221ENST00000567935 ST20Q9HBF5 79 aa10.6□□□□□ -0.71
COMMD4-221ENST00000567935 A0A087WWL8 130 aa10.59□□□□□ -0.71
COMMD4-221ENST00000567935 TCAPO15273 167 aa10.59□□□□□ -0.71
COMMD4-221ENST00000567935 KIR2DL5BA0A0G2JN68 375 aa10.58□□□□□ -0.72
COMMD4-221ENST00000567935 KIR2DL5BA0A0G2JPC4 375 aa10.58□□□□□ -0.72
COMMD4-221ENST00000567935 VCYO14598 125 aa10.58□□□□□ -0.72
COMMD4-221ENST00000567935 ATP5LO75964 103 aa10.58□□□□□ -0.72
COMMD4-221ENST00000567935 ZNF56Q15929 161 aa10.58□□□□□ -0.72
COMMD4-221ENST00000567935 KIR2DL5AQ8N109 375 aa10.58□□□□□ -0.72
COMMD4-221ENST00000567935 ZNF664Q8N3J9 261 aa10.58□□□□□ -0.72
COMMD4-221ENST00000567935 IL17DQ8TAD2 202 aa10.58□□□□□ -0.72
COMMD4-221ENST00000567935 C16orf74Q96GX8 76 aa10.58□□□□□ -0.72
COMMD4-221ENST00000567935 JPT2Q9H910 190 aa10.58□□□□□ -0.72
COMMD4-221ENST00000567935 M0QY20 66 aa10.57□□□□□ -0.72
COMMD4-221ENST00000567935 GIG44P09565 113 aaPredicted RBP10.57□□□□□ -0.72
COMMD4-221ENST00000567935 LGALS9BQ3B8N2 356 aa10.57□□□□□ -0.72
COMMD4-221ENST00000567935 FAM74A4Q5TZK3 123 aa10.57□□□□□ -0.72
COMMD4-221ENST00000567935 LINC01545Q5VT33 79 aa10.57□□□□□ -0.72
COMMD4-221ENST00000567935 RNASE8Q8TDE3 154 aaKnown RBP10.57□□□□□ -0.72
COMMD4-221ENST00000567935 IFI27L1Q96BM0 104 aa10.57□□□□□ -0.72
COMMD4-221ENST00000567935 RPL39LQ96EH5 51 aaKnown RBP10.57□□□□□ -0.72
COMMD4-221ENST00000567935 B9D2Q9BPU9 175 aa10.57□□□□□ -0.72
COMMD4-221ENST00000567935 RYR1P21817 5038 aa10.57□□□□□ -0.72
COMMD4-221ENST00000567935 LCE6AA0A183 80 aa10.56□□□□□ -0.72
COMMD4-221ENST00000567935 RPL35AP18077 110 aaKnown RBP10.56□□□□□ -0.72
COMMD4-221ENST00000567935 POLR2KP53803 58 aaKnown RBP10.56□□□□□ -0.72
COMMD4-221ENST00000567935 CASC10Q5T4H9 136 aa10.56□□□□□ -0.72
COMMD4-221ENST00000567935 LGALS9CQ6DKI2 356 aa10.56□□□□□ -0.72
COMMD4-221ENST00000567935 ZFP2Q6ZN57 461 aa10.56□□□□□ -0.72
COMMD4-221ENST00000567935 LINC00173Q6ZV60 143 aa10.56□□□□□ -0.72
COMMD4-221ENST00000567935 KIR2DL4Q99706 377 aa10.56□□□□□ -0.72
COMMD4-221ENST00000567935 CSTL1Q9H114 145 aa10.56□□□□□ -0.72
COMMD4-221ENST00000567935 TRAV9-2A0A087WT02 112 aa10.55□□□□□ -0.72
COMMD4-221ENST00000567935 TRBV27A0A0K0K1C4 114 aa10.55□□□□□ -0.72
COMMD4-221ENST00000567935 RS1O15537 224 aa10.55□□□□□ -0.72
COMMD4-221ENST00000567935 CIDEAO60543 219 aa10.55□□□□□ -0.72
COMMD4-221ENST00000567935 NUDT3O95989 172 aa10.55□□□□□ -0.72
COMMD4-221ENST00000567935 DAZ2Q13117 558 aaKnown RBP10.55□□□□□ -0.72
COMMD4-221ENST00000567935 ZNF705AQ6ZN79 300 aaPredicted RBP10.55□□□□□ -0.72
COMMD4-221ENST00000567935 CSNK1G2-AS1Q8NCQ2 148 aa10.55□□□□□ -0.72
COMMD4-221ENST00000567935 WFDC10AQ9H1F0 79 aa10.55□□□□□ -0.72
COMMD4-221ENST00000567935 IGHV3OR16-12A0A075B7B8 117 aa10.54□□□□□ -0.72
COMMD4-221ENST00000567935 UFSP1Q6NVU6 142 aa10.54□□□□□ -0.72
COMMD4-221ENST00000567935 KIR2DL5BQ8NHK3 375 aa10.54□□□□□ -0.72
COMMD4-221ENST00000567935 HUWE1Q7Z6Z7 4374 aaKnown RBP10.53□□□□□ -0.72
COMMD4-221ENST00000567935 SDHAF1A6NFY7 115 aa10.53□□□□□ -0.72
COMMD4-221ENST00000567935 HSBP1L1C9JCN9 74 aa10.53□□□□□ -0.72
COMMD4-221ENST00000567935 IGLL1P15814 213 aa10.53□□□□□ -0.72
COMMD4-221ENST00000567935 DDTP30046 118 aa10.53□□□□□ -0.72
COMMD4-221ENST00000567935 RRN3P1Q2M238 152 aa10.53□□□□□ -0.72
COMMD4-221ENST00000567935 CFAP126Q5VTH2 177 aa10.53□□□□□ -0.72
COMMD4-221ENST00000567935 DNAJC30Q96LL9 226 aa10.53□□□□□ -0.72
COMMD4-221ENST00000567935 PRO1933Q9H354 126 aa10.53□□□□□ -0.72
COMMD4-221ENST00000567935 ZMAT5Q9UDW3 170 aaKnown RBP10.53□□□□□ -0.72
COMMD4-221ENST00000567935 IGHV3-53P01767 116 aa10.52□□□□□ -0.73
COMMD4-221ENST00000567935 AZU1P20160 251 aa10.52□□□□□ -0.73
COMMD4-221ENST00000567935 RHOHQ15669 191 aa10.52□□□□□ -0.73
COMMD4-221ENST00000567935 TOMM6Q96B49 74 aa10.52□□□□□ -0.73
COMMD4-221ENST00000567935 PAM16Q9Y3D7 125 aa10.52□□□□□ -0.73
COMMD4-221ENST00000567935 SMIM9A6NGZ8 99 aa10.51□□□□□ -0.73
COMMD4-221ENST00000567935 APOC4P55056 127 aa10.51□□□□□ -0.73
COMMD4-221ENST00000567935 KRTAP10-11P60412 298 aa10.51□□□□□ -0.73
COMMD4-221ENST00000567935 SPATA45Q537H7 98 aa10.51□□□□□ -0.73
COMMD4-221ENST00000567935 OVOL2Q9BRP0 275 aa10.51□□□□□ -0.73
COMMD4-221ENST00000567935 MRPL16Q9NX20 251 aaKnown RBP10.51□□□□□ -0.73
COMMD4-221ENST00000567935 TRAV4A0A0B4J268 109 aa10.5□□□□□ -0.73
COMMD4-221ENST00000567935 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.5□□□□□ -0.73
COMMD4-221ENST00000567935 CYSLTR1Q9Y271 337 aa10.5□□□□□ -0.73
COMMD4-221ENST00000567935 STARD9Q9P2P6 4700 aa10.5□□□□□ -0.73
COMMD4-221ENST00000567935 TRGV1A0A0A0MS02 117 aa10.49□□□□□ -0.73
COMMD4-221ENST00000567935 LINC00587B1AMM8 73 aa10.49□□□□□ -0.73
COMMD4-221ENST00000567935 I3L3M4 83 aa10.49□□□□□ -0.73
COMMD4-221ENST00000567935 PRM2P04554 102 aa10.49□□□□□ -0.73
COMMD4-221ENST00000567935 PRSS1P07477 247 aa10.49□□□□□ -0.73
COMMD4-221ENST00000567935 C2orf66Q6UXQ4 117 aa10.49□□□□□ -0.73
COMMD4-221ENST00000567935 OR4C5Q8NGB2 326 aa10.49□□□□□ -0.73
COMMD4-221ENST00000567935 MIEN1Q9BRT3 115 aa10.49□□□□□ -0.73
COMMD4-221ENST00000567935 TNFRSF18Q9Y5U5 241 aa10.49□□□□□ -0.73
COMMD4-221ENST00000567935 NACAE9PAV3 2078 aa10.49□□□□□ -0.73
COMMD4-221ENST00000567935 CSMD3Q7Z407 3707 aa10.48□□□□□ -0.73
COMMD4-221ENST00000567935 TRBV10-1A0A0K0K1A3 114 aa10.48□□□□□ -0.73
COMMD4-221ENST00000567935 Q6ZN92 141 aa10.48□□□□□ -0.73
COMMD4-221ENST00000567935 ERASQ7Z444 233 aa10.48□□□□□ -0.73
COMMD4-221ENST00000567935 MUC7Q8TAX7 377 aa10.48□□□□□ -0.73
COMMD4-221ENST00000567935 C18orf15Q96N68 181 aa10.48□□□□□ -0.73
COMMD4-221ENST00000567935 SCGB3A1Q96QR1 104 aa10.48□□□□□ -0.73
COMMD4-221ENST00000567935 TRAV12-1A0A0B4J245 112 aa10.47□□□□□ -0.73
COMMD4-221ENST00000567935 PLAC8L1A1L4L8 177 aa10.47□□□□□ -0.73
COMMD4-221ENST00000567935 H0Y8G0 127 aa10.47□□□□□ -0.73
COMMD4-221ENST00000567935 ATOH7Q8N100 152 aa10.47□□□□□ -0.73
COMMD4-221ENST00000567935 TMEM141Q96I45 108 aa10.47□□□□□ -0.73
COMMD4-221ENST00000567935 UQCR10Q9UDW1 63 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms