RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 HTN1P15515 57 aa4.13□□□□□ -1.75
SF3B3-210ENST00000567654 PCP4P48539 62 aa4.13□□□□□ -1.75
SF3B3-210ENST00000567654 MORN3Q6PF18 240 aaPredicted RBP4.13□□□□□ -1.75
SF3B3-210ENST00000567654 POM121L12Q8N7R1 296 aa4.13□□□□□ -1.75
SF3B3-210ENST00000567654 RASL10AQ92737 203 aa4.13□□□□□ -1.75
SF3B3-210ENST00000567654 DPH3P1Q9H4G8 78 aa4.13□□□□□ -1.75
SF3B3-210ENST00000567654 NIT2Q9NQR4 276 aa4.13□□□□□ -1.75
SF3B3-210ENST00000567654 TNFRSF18Q9Y5U5 241 aa4.13□□□□□ -1.75
SF3B3-210ENST00000567654 PCP4L1A6NKN8 68 aa4.12□□□□□ -1.75
SF3B3-210ENST00000567654 RHODO00212 210 aa4.12□□□□□ -1.75
SF3B3-210ENST00000567654 CRYGDP07320 174 aa4.12□□□□□ -1.75
SF3B3-210ENST00000567654 IGLL1P15814 213 aa4.12□□□□□ -1.75
SF3B3-210ENST00000567654 KRTDAPP60985 99 aa4.12□□□□□ -1.75
SF3B3-210ENST00000567654 C9orf66Q5T8R8 295 aa4.12□□□□□ -1.75
SF3B3-210ENST00000567654 CSNK1G2-AS1Q8NCQ2 148 aa4.12□□□□□ -1.75
SF3B3-210ENST00000567654 CHCHD1Q96BP2 118 aaKnown RBP4.12□□□□□ -1.75
SF3B3-210ENST00000567654 AP1S3Q96PC3 154 aa4.12□□□□□ -1.75
SF3B3-210ENST00000567654 LINC01587Q99440 93 aa4.12□□□□□ -1.75
SF3B3-210ENST00000567654 LINC00467Q9BRT7 94 aa4.12□□□□□ -1.75
SF3B3-210ENST00000567654 GSN-AS1Q9NRJ2 163 aa4.12□□□□□ -1.75
SF3B3-210ENST00000567654 DNAH9Q9NYC9 4486 aa4.11□□□□□ -1.75
SF3B3-210ENST00000567654 IGHV3OR16-12A0A075B7B8 117 aa4.11□□□□□ -1.75
SF3B3-210ENST00000567654 PLAC8L1A1L4L8 177 aa4.11□□□□□ -1.75
SF3B3-210ENST00000567654 LINC01546A6NGU7 62 aa4.11□□□□□ -1.75
SF3B3-210ENST00000567654 TCAPO15273 167 aa4.11□□□□□ -1.75
SF3B3-210ENST00000567654 RIPPLY3P57055 190 aa4.11□□□□□ -1.75
SF3B3-210ENST00000567654 ZNF415Q09FC8 603 aa4.11□□□□□ -1.75
SF3B3-210ENST00000567654 FAM74A4Q5TZK3 123 aa4.11□□□□□ -1.75
SF3B3-210ENST00000567654 UFSP1Q6NVU6 142 aa4.11□□□□□ -1.75
SF3B3-210ENST00000567654 FA2HQ7L5A8 372 aa4.11□□□□□ -1.75
SF3B3-210ENST00000567654 NEGR1Q7Z3B1 354 aa4.11□□□□□ -1.75
SF3B3-210ENST00000567654 DEFB104AQ8WTQ1 72 aa4.11□□□□□ -1.75
SF3B3-210ENST00000567654 MRAP2Q96G30 205 aa4.11□□□□□ -1.75
SF3B3-210ENST00000567654 FAM110AQ9BQ89 295 aa4.11□□□□□ -1.75
SF3B3-210ENST00000567654 C20orf144Q9BQM9 153 aa4.11□□□□□ -1.75
SF3B3-210ENST00000567654 MCRIP2Q9BUT9 160 aaKnown RBP4.11□□□□□ -1.75
SF3B3-210ENST00000567654 MAP1LC3AQ9H492 121 aa4.11□□□□□ -1.75
SF3B3-210ENST00000567654 MRPL16Q9NX20 251 aaKnown RBP4.11□□□□□ -1.75
SF3B3-210ENST00000567654 Q9UF83 564 aa4.11□□□□□ -1.75
SF3B3-210ENST00000567654 STAB1Q9NY15 2570 aa4.1□□□□□ -1.75
SF3B3-210ENST00000567654 IGHV3-73A0A0B4J1V6 119 aa4.1□□□□□ -1.75
SF3B3-210ENST00000567654 PRSS47A8MTI9 375 aa4.1□□□□□ -1.75
SF3B3-210ENST00000567654 SCGB1D1O95968 90 aa4.1□□□□□ -1.75
SF3B3-210ENST00000567654 PPBPP02775 128 aa4.1□□□□□ -1.75
SF3B3-210ENST00000567654 P0DMU3 169 aa4.1□□□□□ -1.75
SF3B3-210ENST00000567654 FAM231AP0DMU4 169 aa4.1□□□□□ -1.75
SF3B3-210ENST00000567654 FAM231CP0DMU5 169 aa4.1□□□□□ -1.75
SF3B3-210ENST00000567654 CMC4P56277 68 aaPredicted RBP4.1□□□□□ -1.75
SF3B3-210ENST00000567654 ZNF876PQ49A33 203 aa4.1□□□□□ -1.75
SF3B3-210ENST00000567654 SMIM15Q7Z3B0 74 aa4.1□□□□□ -1.75
SF3B3-210ENST00000567654 Q8N8P6 123 aa4.1□□□□□ -1.75
SF3B3-210ENST00000567654 WFDC9Q8NEX5 89 aa4.1□□□□□ -1.75
SF3B3-210ENST00000567654 RNASE8Q8TDE3 154 aaKnown RBP4.1□□□□□ -1.75
SF3B3-210ENST00000567654 SMIM2Q9BVW6 85 aa4.1□□□□□ -1.75
SF3B3-210ENST00000567654 PRO1933Q9H354 126 aa4.1□□□□□ -1.75
SF3B3-210ENST00000567654 LAMTOR2Q9Y2Q5 125 aa4.1□□□□□ -1.75
SF3B3-210ENST00000567654 A0A0A0MQY5 61 aa4.09□□□□□ -1.75
SF3B3-210ENST00000567654 M0QY20 66 aa4.09□□□□□ -1.75
SF3B3-210ENST00000567654 M0R2P5 195 aa4.09□□□□□ -1.75
SF3B3-210ENST00000567654 LEPROTL1O95214 131 aa4.09□□□□□ -1.75
SF3B3-210ENST00000567654 INSL3P51460 131 aa4.09□□□□□ -1.75
SF3B3-210ENST00000567654 KRTAP10-11P60412 298 aa4.09□□□□□ -1.75
SF3B3-210ENST00000567654 ZNF56Q15929 161 aa4.09□□□□□ -1.75
SF3B3-210ENST00000567654 MAJINQ3KP22 176 aa4.09□□□□□ -1.75
SF3B3-210ENST00000567654 PIK3CD-AS1Q5SR53 167 aa4.09□□□□□ -1.75
SF3B3-210ENST00000567654 CFAP126Q5VTH2 177 aa4.09□□□□□ -1.75
SF3B3-210ENST00000567654 ZNF705AQ6ZN79 300 aaPredicted RBP4.09□□□□□ -1.75
SF3B3-210ENST00000567654 TEX43Q6ZNM6 134 aa4.09□□□□□ -1.75
SF3B3-210ENST00000567654 ATOH7Q8N100 152 aa4.09□□□□□ -1.75
SF3B3-210ENST00000567654 ZNF664Q8N3J9 261 aa4.09□□□□□ -1.75
SF3B3-210ENST00000567654 TMEM158Q8WZ71 300 aa4.09□□□□□ -1.75
SF3B3-210ENST00000567654 TMEM208Q9BTX3 173 aa4.09□□□□□ -1.75
SF3B3-210ENST00000567654 PKD1L1Q8TDX9 2849 aa4.08□□□□□ -1.76
SF3B3-210ENST00000567654 LINC00587B1AMM8 73 aa4.08□□□□□ -1.76
SF3B3-210ENST00000567654 H0Y8G0 127 aa4.08□□□□□ -1.76
SF3B3-210ENST00000567654 SYS1-DBNDD2H3BUS1 97 aa4.08□□□□□ -1.76
SF3B3-210ENST00000567654 RS1O15537 224 aa4.08□□□□□ -1.76
SF3B3-210ENST00000567654 HBDP02042 147 aa4.08□□□□□ -1.76
SF3B3-210ENST00000567654 SMIM17P0DL12 118 aa4.08□□□□□ -1.76
SF3B3-210ENST00000567654 POLR2KP53803 58 aaKnown RBP4.08□□□□□ -1.76
SF3B3-210ENST00000567654 Q6ZTI0 123 aa4.08□□□□□ -1.76
SF3B3-210ENST00000567654 TMEM263Q8WUH6 116 aaKnown RBP4.08□□□□□ -1.76
SF3B3-210ENST00000567654 PTH2Q96A98 100 aa4.08□□□□□ -1.76
SF3B3-210ENST00000567654 C18orf15Q96N68 181 aa4.08□□□□□ -1.76
SF3B3-210ENST00000567654 PMCHL2Q9BQD1 86 aa4.08□□□□□ -1.76
SF3B3-210ENST00000567654 TMEM70Q9BUB7 260 aa4.08□□□□□ -1.76
SF3B3-210ENST00000567654 CSTL1Q9H114 145 aa4.08□□□□□ -1.76
SF3B3-210ENST00000567654 NXT2Q9NPJ8 142 aaKnown RBP4.08□□□□□ -1.76
SF3B3-210ENST00000567654 TRGV1A0A0A0MS02 117 aa4.07□□□□□ -1.76
SF3B3-210ENST00000567654 KIR2DL5BA0A0G2JN68 375 aa4.07□□□□□ -1.76
SF3B3-210ENST00000567654 KIR2DL5BA0A0G2JPC4 375 aa4.07□□□□□ -1.76
SF3B3-210ENST00000567654 TRBV6-5A0A0K0K1A5 114 aa4.07□□□□□ -1.76
SF3B3-210ENST00000567654 IGHV3-53P01767 116 aa4.07□□□□□ -1.76
SF3B3-210ENST00000567654 FCER1GP30273 86 aa4.07□□□□□ -1.76
SF3B3-210ENST00000567654 NUTF2P61970 127 aaKnown RBP4.07□□□□□ -1.76
SF3B3-210ENST00000567654 LAGE3Q14657 143 aa4.07□□□□□ -1.76
SF3B3-210ENST00000567654 GTSCR1Q86UQ5 136 aa4.07□□□□□ -1.76
SF3B3-210ENST00000567654 KIR2DL5AQ8N109 375 aa4.07□□□□□ -1.76
SF3B3-210ENST00000567654 C3orf56Q8N813 242 aa4.07□□□□□ -1.76
SF3B3-210ENST00000567654 ZNF479Q96JC4 524 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms