RNA–Protein interactions for RNA: ENST00000567572.5

CMTM3-214, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-214ENST00000567572 HIST1H4GQ99525 98 aa13.11□□□□□ -0.31
CMTM3-214ENST00000567572 EDA2RQ9HAV5 297 aa13.11□□□□□ -0.31
CMTM3-214ENST00000567572 NHP2Q9NX24 153 aaKnown RBP13.11□□□□□ -0.31
CMTM3-214ENST00000567572 F5H697 171 aa13.1□□□□□ -0.31
CMTM3-214ENST00000567572 SLURP1P55000 103 aa13.1□□□□□ -0.31
CMTM3-214ENST00000567572 NSUN5P1Q3KNT7 163 aa13.1□□□□□ -0.31
CMTM3-214ENST00000567572 Q8N1Y9 231 aa13.1□□□□□ -0.31
CMTM3-214ENST00000567572 A0A087WWL8 130 aa13.09□□□□□ -0.31
CMTM3-214ENST00000567572 A8MTW9 85 aa13.09□□□□□ -0.31
CMTM3-214ENST00000567572 AMTNQ6UX39 209 aa13.09□□□□□ -0.31
CMTM3-214ENST00000567572 PRADC1Q9BSG0 188 aa13.09□□□□□ -0.31
CMTM3-214ENST00000567572 M0QY20 66 aa13.09□□□□□ -0.31
CMTM3-214ENST00000567572 WFDC12Q8WWY7 111 aa13.09□□□□□ -0.31
CMTM3-214ENST00000567572 JPT2Q9H910 190 aa13.09□□□□□ -0.31
CMTM3-214ENST00000567572 CUBNO60494 3623 aa13.09□□□□□ -0.31
CMTM3-214ENST00000567572 MUC4Q99102 2169 aa13.08□□□□□ -0.31
CMTM3-214ENST00000567572 TSHBP01222 138 aa13.08□□□□□ -0.32
CMTM3-214ENST00000567572 CRYGDP07320 174 aa13.08□□□□□ -0.32
CMTM3-214ENST00000567572 KHDC1LQ5JSQ8 128 aa13.08□□□□□ -0.32
CMTM3-214ENST00000567572 SMR3AQ99954 134 aa13.08□□□□□ -0.32
CMTM3-214ENST00000567572 IGLV4-69A0A075B6H9 119 aa13.07□□□□□ -0.32
CMTM3-214ENST00000567572 C12orf74Q32Q52 190 aa13.07□□□□□ -0.32
CMTM3-214ENST00000567572 PIK3CD-AS1Q5SR53 167 aa13.07□□□□□ -0.32
CMTM3-214ENST00000567572 KLHL30-AS1Q8NEE0 82 aa13.07□□□□□ -0.32
CMTM3-214ENST00000567572 C16orf95Q9H693 158 aa13.07□□□□□ -0.32
CMTM3-214ENST00000567572 MDFICQ9P1T7 246 aa13.07□□□□□ -0.32
CMTM3-214ENST00000567572 OTOGQ6ZRI0 2925 aa13.07□□□□□ -0.32
CMTM3-214ENST00000567572 NF1P21359 2839 aa13.07□□□□□ -0.32
CMTM3-214ENST00000567572 C11orf86A6NJI1 115 aa13.07□□□□□ -0.32
CMTM3-214ENST00000567572 A6NJY4 79 aa13.07□□□□□ -0.32
CMTM3-214ENST00000567572 HILS1P60008 231 aa13.07□□□□□ -0.32
CMTM3-214ENST00000567572 ZNF56Q15929 161 aa13.07□□□□□ -0.32
CMTM3-214ENST00000567572 SPINK13Q1W4C9 94 aa13.07□□□□□ -0.32
CMTM3-214ENST00000567572 NEGR1Q7Z3B1 354 aa13.07□□□□□ -0.32
CMTM3-214ENST00000567572 NAA38Q9BRA0 125 aaKnown RBP13.07□□□□□ -0.32
CMTM3-214ENST00000567572 TRAV12-2A0A075B6T6 113 aa13.06□□□□□ -0.32
CMTM3-214ENST00000567572 IGLL5B9A064 214 aa13.06□□□□□ -0.32
CMTM3-214ENST00000567572 ZNF418Q8TF45 676 aaPredicted RBP13.06□□□□□ -0.32
CMTM3-214ENST00000567572 K7ERJ3 54 aa13.05□□□□□ -0.32
CMTM3-214ENST00000567572 DUX3Q96PT4 197 aa13.05□□□□□ -0.32
CMTM3-214ENST00000567572 ZNF815PA8K554 130 aa13.05□□□□□ -0.32
CMTM3-214ENST00000567572 ZNF876PQ49A33 203 aa13.05□□□□□ -0.32
CMTM3-214ENST00000567572 FAM74A4Q5TZK3 123 aa13.05□□□□□ -0.32
CMTM3-214ENST00000567572 PEMTQ9UBM1 199 aa13.05□□□□□ -0.32
CMTM3-214ENST00000567572 RNF151Q2KHN1 245 aa13.04□□□□□ -0.32
CMTM3-214ENST00000567572 HIST2H2BDQ6DRA6 164 aa13.04□□□□□ -0.32
CMTM3-214ENST00000567572 MORN3Q6PF18 240 aaPredicted RBP13.04□□□□□ -0.32
CMTM3-214ENST00000567572 LINC01006Q8NI28 216 aa13.04□□□□□ -0.32
CMTM3-214ENST00000567572 ZNF479Q96JC4 524 aa13.04□□□□□ -0.32
CMTM3-214ENST00000567572 LY6G6DO95868 133 aa13.03□□□□□ -0.32
CMTM3-214ENST00000567572 IGKV3-20P01619 116 aa13.03□□□□□ -0.32
CMTM3-214ENST00000567572 NFE4Q86UQ8 179 aa13.03□□□□□ -0.32
CMTM3-214ENST00000567572 DLX4Q92988 240 aaPredicted RBP13.03□□□□□ -0.32
CMTM3-214ENST00000567572 PTH2Q96A98 100 aa13.03□□□□□ -0.32
CMTM3-214ENST00000567572 VPS25Q9BRG1 176 aa13.03□□□□□ -0.32
CMTM3-214ENST00000567572 MTORP42345 2549 aa13.03□□□□□ -0.32
CMTM3-214ENST00000567572 SPAG8Q99932 426 aaPredicted RBP13.03□□□□□ -0.32
CMTM3-214ENST00000567572 I3L3M4 83 aa13.02□□□□□ -0.32
CMTM3-214ENST00000567572 CD28P10747 220 aa13.02□□□□□ -0.32
CMTM3-214ENST00000567572 FHL3Q13643 280 aa13.02□□□□□ -0.32
CMTM3-214ENST00000567572 RRN3P1Q2M238 152 aa13.02□□□□□ -0.32
CMTM3-214ENST00000567572 SCGB1D4Q6XE38 83 aa13.02□□□□□ -0.32
CMTM3-214ENST00000567572 RPL39P62891 51 aaKnown RBP13.01□□□□□ -0.33
CMTM3-214ENST00000567572 RAX2Q96IS3 184 aa13.01□□□□□ -0.33
CMTM3-214ENST00000567572 LINC00467Q9BRT7 94 aa13.01□□□□□ -0.33
CMTM3-214ENST00000567572 SPANXB1Q9NS25 103 aaPredicted RBP13.01□□□□□ -0.33
CMTM3-214ENST00000567572 C20orf203Q8NBC4 194 aa13.01□□□□□ -0.33
CMTM3-214ENST00000567572 F8W1H4 67 aa13□□□□□ -0.33
CMTM3-214ENST00000567572 CIDEAO60543 219 aa13□□□□□ -0.33
CMTM3-214ENST00000567572 C11orf44Q8N8P7 122 aa13□□□□□ -0.33
CMTM3-214ENST00000567572 G3V4G9 280 aa13□□□□□ -0.33
CMTM3-214ENST00000567572 NDUFA7O95182 113 aa13□□□□□ -0.33
CMTM3-214ENST00000567572 CRYBA4P53673 196 aa13□□□□□ -0.33
CMTM3-214ENST00000567572 CD300EQ496F6 205 aaPredicted RBP13□□□□□ -0.33
CMTM3-214ENST00000567572 H3BMM0 161 aa12.99□□□□□ -0.33
CMTM3-214ENST00000567572 CITED2Q99967 270 aaPredicted RBP12.99□□□□□ -0.33
CMTM3-214ENST00000567572 HIVEP2P31629 2446 aa12.98□□□□□ -0.33
CMTM3-214ENST00000567572 A8MWV9 139 aa12.98□□□□□ -0.33
CMTM3-214ENST00000567572 UBE2D1P51668 147 aa12.98□□□□□ -0.33
CMTM3-214ENST00000567572 TMEM61Q8N0U2 210 aa12.98□□□□□ -0.33
CMTM3-214ENST00000567572 PYGO1Q9Y3Y4 419 aa12.98□□□□□ -0.33
CMTM3-214ENST00000567572 TSSC4Q9Y5U2 329 aaPredicted RBP12.98□□□□□ -0.33
CMTM3-214ENST00000567572 DEFB131AP59861 70 aa12.98□□□□□ -0.33
CMTM3-214ENST00000567572 ZNF415Q09FC8 603 aa12.98□□□□□ -0.33
CMTM3-214ENST00000567572 A0A0J9YY99 117 aa12.97□□□□□ -0.33
CMTM3-214ENST00000567572 A0A1W2PRX2 142 aa12.97□□□□□ -0.33
CMTM3-214ENST00000567572 CCL24O00175 119 aa12.97□□□□□ -0.33
CMTM3-214ENST00000567572 SRSF9Q13242 221 aaKnown RBP eCLIP12.97□□□□□ -0.33
CMTM3-214ENST00000567572 CLUHP3Q96NS8 147 aa12.97□□□□□ -0.33
CMTM3-214ENST00000567572 NOTCH2Q04721 2471 aa12.96□□□□□ -0.33
CMTM3-214ENST00000567572 M0R2P5 195 aa12.96□□□□□ -0.33
CMTM3-214ENST00000567572 SAP30O75446 220 aa12.96□□□□□ -0.33
CMTM3-214ENST00000567572 P0DMU3 169 aa12.96□□□□□ -0.33
CMTM3-214ENST00000567572 FAM231AP0DMU4 169 aa12.96□□□□□ -0.33
CMTM3-214ENST00000567572 FAM231CP0DMU5 169 aa12.96□□□□□ -0.33
CMTM3-214ENST00000567572 TMEM170BQ5T4T1 132 aa12.96□□□□□ -0.33
CMTM3-214ENST00000567572 ZNRF2Q8NHG8 242 aa12.96□□□□□ -0.33
CMTM3-214ENST00000567572 RBMY1A1P0DJD3 496 aaKnown RBP12.96□□□□□ -0.34
CMTM3-214ENST00000567572 RBMY1CP0DJD4 496 aa12.96□□□□□ -0.34
CMTM3-214ENST00000567572 RBMY1FQ15415 496 aaKnown RBP12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms