RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 OPRPNQ99935 248 aaPredicted RBP8.74□□□□□ -1.01
CDH1-210ENST00000566612 A8MWV9 139 aa8.74□□□□□ -1.01
CDH1-210ENST00000566612 C12orf74Q32Q52 190 aa8.74□□□□□ -1.01
CDH1-210ENST00000566612 TMEM61Q8N0U2 210 aa8.74□□□□□ -1.01
CDH1-210ENST00000566612 PLEKHB2Q96CS7 222 aa8.74□□□□□ -1.01
CDH1-210ENST00000566612 U3KQK5 164 aa8.73□□□□□ -1.01
CDH1-210ENST00000566612 TMEM238C9JI98 176 aa8.73□□□□□ -1.01
CDH1-210ENST00000566612 J3QQQ9 107 aa8.73□□□□□ -1.01
CDH1-210ENST00000566612 BAALCQ8WXS3 180 aa8.73□□□□□ -1.01
CDH1-210ENST00000566612 AZU1P20160 251 aa8.73□□□□□ -1.01
CDH1-210ENST00000566612 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.73□□□□□ -1.01
CDH1-210ENST00000566612 IGKV2-29A2NJV5 120 aaPredicted RBP8.73□□□□□ -1.01
CDH1-210ENST00000566612 OR13C6PQ8NH95 151 aa8.73□□□□□ -1.01
CDH1-210ENST00000566612 A0A0J9YXV3 536 aa8.72□□□□□ -1.01
CDH1-210ENST00000566612 GAGE7O76087 117 aa8.72□□□□□ -1.01
CDH1-210ENST00000566612 GAGE12FP0CL80 117 aa8.72□□□□□ -1.01
CDH1-210ENST00000566612 GAGE12GP0CL81 117 aa8.72□□□□□ -1.01
CDH1-210ENST00000566612 GAGE12IP0CL82 117 aa8.72□□□□□ -1.01
CDH1-210ENST00000566612 ZZEF1O43149 2961 aa8.72□□□□□ -1.01
CDH1-210ENST00000566612 HIST2H2BCQ6DN03 193 aa8.72□□□□□ -1.01
CDH1-210ENST00000566612 U3KQE9 123 aa8.72□□□□□ -1.01
CDH1-210ENST00000566612 DLX4Q92988 240 aaPredicted RBP8.72□□□□□ -1.01
CDH1-210ENST00000566612 PIFOQ8TCI5 191 aa8.71□□□□□ -1.01
CDH1-210ENST00000566612 TOMM6Q96B49 74 aa8.71□□□□□ -1.01
CDH1-210ENST00000566612 M0R2P5 195 aa8.71□□□□□ -1.02
CDH1-210ENST00000566612 CCL24O00175 119 aa8.71□□□□□ -1.02
CDH1-210ENST00000566612 GTSF1LQ9H1H1 148 aa8.71□□□□□ -1.02
CDH1-210ENST00000566612 C11orf86A6NJI1 115 aa8.71□□□□□ -1.02
CDH1-210ENST00000566612 RHODO00212 210 aa8.71□□□□□ -1.02
CDH1-210ENST00000566612 P0DMU3 169 aa8.7□□□□□ -1.02
CDH1-210ENST00000566612 FAM231AP0DMU4 169 aa8.7□□□□□ -1.02
CDH1-210ENST00000566612 FAM231CP0DMU5 169 aa8.7□□□□□ -1.02
CDH1-210ENST00000566612 PRM2P04554 102 aa8.7□□□□□ -1.02
CDH1-210ENST00000566612 C11orf68Q9H3H3 251 aaKnown RBP8.7□□□□□ -1.02
CDH1-210ENST00000566612 FGF6P10767 208 aa8.69□□□□□ -1.02
CDH1-210ENST00000566612 K7EQG2 157 aa8.69□□□□□ -1.02
CDH1-210ENST00000566612 NRACQ8N912 160 aa8.69□□□□□ -1.02
CDH1-210ENST00000566612 AGRNO00468 2067 aa8.69□□□□□ -1.02
CDH1-210ENST00000566612 SPINK8P0C7L1 97 aa8.69□□□□□ -1.02
CDH1-210ENST00000566612 RNASE3P12724 160 aaKnown RBP8.69□□□□□ -1.02
CDH1-210ENST00000566612 A0A096LNJ9 63 aa8.69□□□□□ -1.02
CDH1-210ENST00000566612 IGHV4-31P0DP07 118 aa8.69□□□□□ -1.02
CDH1-210ENST00000566612 CEMP1Q6PRD7 247 aaPredicted RBP8.69□□□□□ -1.02
CDH1-210ENST00000566612 C2orf91Q6ZV80 131 aa8.69□□□□□ -1.02
CDH1-210ENST00000566612 MAPKAPK5-AS1Q8N8E1 139 aa8.69□□□□□ -1.02
CDH1-210ENST00000566612 PSMB8P28062 276 aa8.68□□□□□ -1.02
CDH1-210ENST00000566612 C18orf65Q6ZTR6 163 aa8.68□□□□□ -1.02
CDH1-210ENST00000566612 NOP10Q9NPE3 64 aaKnown RBP8.68□□□□□ -1.02
CDH1-210ENST00000566612 NDUFA12Q9UI09 145 aa8.68□□□□□ -1.02
CDH1-210ENST00000566612 IGLL5B9A064 214 aa8.68□□□□□ -1.02
CDH1-210ENST00000566612 COL27A1Q8IZC6 1860 aaPredicted RBP8.68□□□□□ -1.02
CDH1-210ENST00000566612 KRTAP10-9P60411 292 aa8.68□□□□□ -1.02
CDH1-210ENST00000566612 TAL2Q16559 108 aa8.68□□□□□ -1.02
CDH1-210ENST00000566612 PRIMA1Q86XR5 153 aa8.68□□□□□ -1.02
CDH1-210ENST00000566612 LRBAP50851 2863 aa8.68□□□□□ -1.02
CDH1-210ENST00000566612 TRAV12-1A0A0B4J245 112 aa8.67□□□□□ -1.02
CDH1-210ENST00000566612 MED14OSP0DP75 135 aa8.67□□□□□ -1.02
CDH1-210ENST00000566612 WFDC11Q8NEX6 87 aa8.67□□□□□ -1.02
CDH1-210ENST00000566612 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.67□□□□□ -1.02
CDH1-210ENST00000566612 C9JAW5 83 aa8.67□□□□□ -1.02
CDH1-210ENST00000566612 RNASE1P07998 156 aaKnown RBP8.67□□□□□ -1.02
CDH1-210ENST00000566612 RHOHQ15669 191 aa8.67□□□□□ -1.02
CDH1-210ENST00000566612 SH2D6Q7Z4S9 175 aa8.67□□□□□ -1.02
CDH1-210ENST00000566612 IGLV1-40P01703 118 aa8.67□□□□□ -1.02
CDH1-210ENST00000566612 SIGMAR1Q99720 223 aa8.67□□□□□ -1.02
CDH1-210ENST00000566612 CNFNQ9BYD5 112 aa8.67□□□□□ -1.02
CDH1-210ENST00000566612 Q6YL49 198 aa8.66□□□□□ -1.02
CDH1-210ENST00000566612 LINC00158P58513 81 aa8.66□□□□□ -1.02
CDH1-210ENST00000566612 HIGD1BQ9P298 99 aa8.66□□□□□ -1.02
CDH1-210ENST00000566612 SPAG8Q99932 426 aaPredicted RBP8.66□□□□□ -1.02
CDH1-210ENST00000566612 C1QTNF4Q9BXJ3 329 aa8.66□□□□□ -1.02
CDH1-210ENST00000566612 E9PLD3 99 aa8.65□□□□□ -1.02
CDH1-210ENST00000566612 COPS9Q8WXC6 57 aa8.65□□□□□ -1.02
CDH1-210ENST00000566612 PRO1854Q9UHT4 67 aa8.65□□□□□ -1.02
CDH1-210ENST00000566612 TRBV7-9A0A0J9YWB2 115 aa8.65□□□□□ -1.02
CDH1-210ENST00000566612 SNCGO76070 127 aa8.65□□□□□ -1.02
CDH1-210ENST00000566612 PROK1P58294 105 aa8.65□□□□□ -1.02
CDH1-210ENST00000566612 TMEM89A2RUT3 159 aa8.65□□□□□ -1.02
CDH1-210ENST00000566612 J3QKU1 62 aa8.65□□□□□ -1.02
CDH1-210ENST00000566612 CMC4P56277 68 aaPredicted RBP8.65□□□□□ -1.02
CDH1-210ENST00000566612 WFDC2Q14508 124 aa8.65□□□□□ -1.02
CDH1-210ENST00000566612 DCANP1Q8TF63 244 aa8.65□□□□□ -1.02
CDH1-210ENST00000566612 CITED2Q99967 270 aaPredicted RBP8.65□□□□□ -1.02
CDH1-210ENST00000566612 TEX48A0A1B0GUV7 120 aa8.65□□□□□ -1.03
CDH1-210ENST00000566612 GAGE6Q13070 117 aa8.65□□□□□ -1.03
CDH1-210ENST00000566612 MORN3Q6PF18 240 aaPredicted RBP8.65□□□□□ -1.03
CDH1-210ENST00000566612 A0A096LPF7 62 aa8.64□□□□□ -1.03
CDH1-210ENST00000566612 DNAL4O96015 105 aa8.64□□□□□ -1.03
CDH1-210ENST00000566612 NEXN-AS1Q8NBZ9 246 aa8.64□□□□□ -1.03
CDH1-210ENST00000566612 TSSC4Q9Y5U2 329 aaPredicted RBP8.64□□□□□ -1.03
CDH1-210ENST00000566612 H3BMM0 161 aa8.63□□□□□ -1.03
CDH1-210ENST00000566612 ZNF843Q8N446 348 aa8.63□□□□□ -1.03
CDH1-210ENST00000566612 C20orf203Q8NBC4 194 aa8.63□□□□□ -1.03
CDH1-210ENST00000566612 TIMM17AQ99595 171 aa8.63□□□□□ -1.03
CDH1-210ENST00000566612 MAP6D1Q9H9H5 199 aa8.63□□□□□ -1.03
CDH1-210ENST00000566612 F8W1H4 67 aa8.63□□□□□ -1.03
CDH1-210ENST00000566612 COX8CQ7Z4L0 72 aa8.63□□□□□ -1.03
CDH1-210ENST00000566612 TRAV8-3A0A0A6YYJ7 113 aa8.62□□□□□ -1.03
CDH1-210ENST00000566612 A4D1N5 150 aa8.62□□□□□ -1.03
CDH1-210ENST00000566612 DNAJC9-AS1A6NH13 148 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms