RNA–Protein interactions for RNA: ENST00000566376.3

TCF4-233, Transcript of transcription factor 4, human

TSL 5

Gene TCF4, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-233	ENST00000566376	IFNA7	P01567	189 aa		4.26	□□□□□ -1.73
TCF4-233	ENST00000566376	IGHV3-30	P01768	117 aa		4.26	□□□□□ -1.73
TCF4-233	ENST00000566376	IGHV3-33	P01772	117 aa		4.26	□□□□□ -1.73
TCF4-233	ENST00000566376	IGHV3-30-3	P0DP02	117 aa		4.26	□□□□□ -1.73
TCF4-233	ENST00000566376	IGHV3-30-5	P0DP03	117 aa		4.26	□□□□□ -1.73
TCF4-233	ENST00000566376	MGST1	P10620	155 aa	Known RBP	4.26	□□□□□ -1.73
TCF4-233	ENST00000566376	ASIP	P42127	132 aa		4.26	□□□□□ -1.73
TCF4-233	ENST00000566376	GAGE1	Q13065	139 aa		4.26	□□□□□ -1.73
TCF4-233	ENST00000566376	GAGE4	Q13068	117 aa		4.26	□□□□□ -1.73
TCF4-233	ENST00000566376	GAGE5	Q13069	117 aa		4.26	□□□□□ -1.73
TCF4-233	ENST00000566376	ZFP69	Q49AA0	526 aa		4.26	□□□□□ -1.73
TCF4-233	ENST00000566376	SAPCD1	Q5SSQ6	148 aa		4.26	□□□□□ -1.73
TCF4-233	ENST00000566376	LELP1	Q5T871	98 aa		4.26	□□□□□ -1.73
TCF4-233	ENST00000566376	PRR27	Q6MZM9	219 aa		4.26	□□□□□ -1.73
TCF4-233	ENST00000566376	DAZ4	Q86SG3	579 aa	Known RBP	4.26	□□□□□ -1.73
TCF4-233	ENST00000566376	SFRP2	Q96HF1	295 aa		4.26	□□□□□ -1.73
TCF4-233	ENST00000566376	FMC1	Q96HJ9	113 aa		4.26	□□□□□ -1.73
TCF4-233	ENST00000566376	TXNDC17	Q9BRA2	123 aa		4.26	□□□□□ -1.73
TCF4-233	ENST00000566376	DAZ3	Q9NR90	486 aa	Known RBP	4.26	□□□□□ -1.73
TCF4-233	ENST00000566376	HMCN2	Q8NDA2	5059 aa		4.26	□□□□□ -1.73
TCF4-233	ENST00000566376	C19orf71	A6NCJ1	209 aa		4.25	□□□□□ -1.73
TCF4-233	ENST00000566376		A8MWV9	139 aa		4.25	□□□□□ -1.73
TCF4-233	ENST00000566376		K7EQM0	130 aa		4.25	□□□□□ -1.73
TCF4-233	ENST00000566376	C1QB	P02746	253 aa		4.25	□□□□□ -1.73
TCF4-233	ENST00000566376	CXCL1	P09341	107 aa		4.25	□□□□□ -1.73
TCF4-233	ENST00000566376	IGLC6	P0CF74	106 aa		4.25	□□□□□ -1.73
TCF4-233	ENST00000566376	AKR1C3	P42330	323 aa		4.25	□□□□□ -1.73
TCF4-233	ENST00000566376	KRTAP10-4	P60372	401 aa	Predicted RBP	4.25	□□□□□ -1.73
TCF4-233	ENST00000566376	UBE2D3	P61077	147 aa		4.25	□□□□□ -1.73
TCF4-233	ENST00000566376	UBE2D2	P62837	147 aa		4.25	□□□□□ -1.73
TCF4-233	ENST00000566376	FAM162B	Q5T6X4	162 aa		4.25	□□□□□ -1.73
TCF4-233	ENST00000566376	NTM-AS1	Q6ZSK4	140 aa		4.25	□□□□□ -1.73
TCF4-233	ENST00000566376	TCTE3	Q8IZS6	198 aa		4.25	□□□□□ -1.73
TCF4-233	ENST00000566376	C9orf62	Q8N4C0	152 aa		4.25	□□□□□ -1.73
TCF4-233	ENST00000566376	ATP6V0E2	Q8NHE4	81 aa		4.25	□□□□□ -1.73
TCF4-233	ENST00000566376	SFT2D1	Q8WV19	159 aa		4.25	□□□□□ -1.73
TCF4-233	ENST00000566376	PCNP	Q8WW12	178 aa	Known RBP	4.25	□□□□□ -1.73
TCF4-233	ENST00000566376	GTSF1L	Q9H1H1	148 aa		4.25	□□□□□ -1.73
TCF4-233	ENST00000566376	ZFP30	Q9Y2G7	519 aa		4.25	□□□□□ -1.73
TCF4-233	ENST00000566376	TRAV1-1	A0A0B4J248	108 aa		4.24	□□□□□ -1.73
TCF4-233	ENST00000566376		A0A0D9SG52	128 aa		4.24	□□□□□ -1.73
TCF4-233	ENST00000566376	MUC21	A0A0G2JKD1	596 aa		4.24	□□□□□ -1.73
TCF4-233	ENST00000566376	MUC21	A0A140T8X8	626 aa		4.24	□□□□□ -1.73
TCF4-233	ENST00000566376	UMAD1	C9J7I0	102 aa		4.24	□□□□□ -1.73
TCF4-233	ENST00000566376	USP17L23	D6RBM5	183 aa		4.24	□□□□□ -1.73
TCF4-233	ENST00000566376		M0R381	172 aa		4.24	□□□□□ -1.73
TCF4-233	ENST00000566376	PRSS2	P07478	247 aa		4.24	□□□□□ -1.73
TCF4-233	ENST00000566376	GZMB	P10144	247 aa		4.24	□□□□□ -1.73
TCF4-233	ENST00000566376	RPL35	P42766	123 aa	Known RBP	4.24	□□□□□ -1.73
TCF4-233	ENST00000566376	SULT1A2	P50226	295 aa		4.24	□□□□□ -1.73
TCF4-233	ENST00000566376	PPT1	P50897	306 aa		4.24	□□□□□ -1.73
TCF4-233	ENST00000566376	ERVFC1-1	P60608	527 aa		4.24	□□□□□ -1.73
TCF4-233	ENST00000566376	FAM74A4	Q5TZK3	123 aa		4.24	□□□□□ -1.73
TCF4-233	ENST00000566376	CST9LP1	Q5W188	147 aa		4.24	□□□□□ -1.73
TCF4-233	ENST00000566376	KRTAP26-1	Q6PEX3	210 aa		4.24	□□□□□ -1.73
TCF4-233	ENST00000566376		Q6ZSA8	131 aa		4.24	□□□□□ -1.73
TCF4-233	ENST00000566376	NIT1	Q86X76	327 aa		4.24	□□□□□ -1.73
TCF4-233	ENST00000566376		Q8N814	137 aa		4.24	□□□□□ -1.73
TCF4-233	ENST00000566376	NEXN-AS1	Q8NBZ9	246 aa		4.24	□□□□□ -1.73
TCF4-233	ENST00000566376	OR10G8	Q8NGN5	311 aa		4.24	□□□□□ -1.73
TCF4-233	ENST00000566376	TCEAL7	Q9BRU2	100 aa		4.24	□□□□□ -1.73
TCF4-233	ENST00000566376	NKX6-2	Q9C056	277 aa	Predicted RBP	4.24	□□□□□ -1.73
TCF4-233	ENST00000566376		Q9HAA7	133 aa		4.24	□□□□□ -1.73
TCF4-233	ENST00000566376		A0A1B0GVG6	124 aa		4.23	□□□□□ -1.73
TCF4-233	ENST00000566376	KANTR	A0A1W2PQU2	76 aa		4.23	□□□□□ -1.73
TCF4-233	ENST00000566376	RAB19	A4D1S5	217 aa		4.23	□□□□□ -1.73
TCF4-233	ENST00000566376	RBFOX3	A6NFN3	312 aa		4.23	□□□□□ -1.73
TCF4-233	ENST00000566376		K7EN84	100 aa		4.23	□□□□□ -1.73
TCF4-233	ENST00000566376	CIDEA	O60543	219 aa		4.23	□□□□□ -1.73
TCF4-233	ENST00000566376	OR5AL1	P0C617	328 aa		4.23	□□□□□ -1.73
TCF4-233	ENST00000566376	EVI2A	P22794	236 aa		4.23	□□□□□ -1.73
TCF4-233	ENST00000566376	UBE2G1	P62253	170 aa		4.23	□□□□□ -1.73
TCF4-233	ENST00000566376	LAGE3	Q14657	143 aa		4.23	□□□□□ -1.73
TCF4-233	ENST00000566376	LINC01620	Q4KN68	170 aa		4.23	□□□□□ -1.73
TCF4-233	ENST00000566376	CENPW	Q5EE01	88 aa		4.23	□□□□□ -1.73
TCF4-233	ENST00000566376	OR10J3	Q5JRS4	329 aa		4.23	□□□□□ -1.73
TCF4-233	ENST00000566376	ATRAID	Q6UW56	229 aa		4.23	□□□□□ -1.73
TCF4-233	ENST00000566376	PRADC1	Q9BSG0	188 aa		4.23	□□□□□ -1.73
TCF4-233	ENST00000566376		K7EP13	123 aa		4.22	□□□□□ -1.73
TCF4-233	ENST00000566376	LECT2	O14960	151 aa		4.22	□□□□□ -1.73
TCF4-233	ENST00000566376	TPT1	P13693	172 aa	Known RBP	4.22	□□□□□ -1.73
TCF4-233	ENST00000566376	S100A4	P26447	101 aa	Known RBP	4.22	□□□□□ -1.73
TCF4-233	ENST00000566376	AMT	P48728	403 aa		4.22	□□□□□ -1.73
TCF4-233	ENST00000566376	MPV17L2	Q567V2	206 aa		4.22	□□□□□ -1.73
TCF4-233	ENST00000566376		Q5VSD8	79 aa		4.22	□□□□□ -1.73
TCF4-233	ENST00000566376	SH2D6	Q7Z4S9	175 aa		4.22	□□□□□ -1.73
TCF4-233	ENST00000566376	NFE4	Q86UQ8	179 aa		4.22	□□□□□ -1.73
TCF4-233	ENST00000566376	C10orf126	Q8N4M7	172 aa		4.22	□□□□□ -1.73
TCF4-233	ENST00000566376	GNG13	Q9P2W3	67 aa		4.22	□□□□□ -1.73
TCF4-233	ENST00000566376	SMR3B	P02814	79 aa	Predicted RBP	4.21	□□□□□ -1.74
TCF4-233	ENST00000566376	BCL2	P10415	239 aa		4.21	□□□□□ -1.74
TCF4-233	ENST00000566376	MEF2B	Q02080	365 aa	Predicted RBP	4.21	□□□□□ -1.74
TCF4-233	ENST00000566376	KRTAP5-1	Q6L8H4	278 aa		4.21	□□□□□ -1.74
TCF4-233	ENST00000566376	ENHO	Q6UWT2	76 aa		4.21	□□□□□ -1.74
TCF4-233	ENST00000566376	BAGE2	Q86Y30	109 aa		4.21	□□□□□ -1.74
TCF4-233	ENST00000566376	ZFP82	Q8N141	532 aa		4.21	□□□□□ -1.74
TCF4-233	ENST00000566376	LYPD6B	Q8NI32	183 aa		4.21	□□□□□ -1.74
TCF4-233	ENST00000566376	GFRA4	Q9GZZ7	299 aa		4.21	□□□□□ -1.74
TCF4-233	ENST00000566376	MANBAL	Q9NQG1	85 aa		4.21	□□□□□ -1.74
TCF4-233	ENST00000566376	VAX2	Q9UIW0	290 aa		4.21	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms