RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 TRAV40A0A0B4J280 105 aa2.25□□□□□ -2.05
CHD9-218ENST00000566029 D6R8Y8 96 aa2.25□□□□□ -2.05
CHD9-218ENST00000566029 MP68P56378 58 aa2.25□□□□□ -2.05
CHD9-218ENST00000566029 MUSTN1Q8IVN3 82 aa2.25□□□□□ -2.05
CHD9-218ENST00000566029 TIMM17AQ99595 171 aa2.25□□□□□ -2.05
CHD9-218ENST00000566029 TRBV12-3P01733 135 aa2.25□□□□□ -2.05
CHD9-218ENST00000566029 CYP4F30PQ9H0H9 118 aa2.25□□□□□ -2.05
CHD9-218ENST00000566029 COX7A2LO14548 114 aa2.25□□□□□ -2.05
CHD9-218ENST00000566029 P0DMU3 169 aa2.25□□□□□ -2.05
CHD9-218ENST00000566029 FAM231AP0DMU4 169 aa2.25□□□□□ -2.05
CHD9-218ENST00000566029 FAM231CP0DMU5 169 aa2.25□□□□□ -2.05
CHD9-218ENST00000566029 CLEC19AQ6UXS0 136 aa2.25□□□□□ -2.05
CHD9-218ENST00000566029 SOSTDC1Q6X4U4 206 aa2.25□□□□□ -2.05
CHD9-218ENST00000566029 COX8CQ7Z4L0 72 aa2.25□□□□□ -2.05
CHD9-218ENST00000566029 Q9H3A6 140 aa2.25□□□□□ -2.05
CHD9-218ENST00000566029 SERP1Q9Y6X1 66 aa2.25□□□□□ -2.05
CHD9-218ENST00000566029 ZNF561-AS1K7EIQ3 104 aa2.25□□□□□ -2.05
CHD9-218ENST00000566029 IGHV3-48P01763 117 aa2.25□□□□□ -2.05
CHD9-218ENST00000566029 CD177Q8N6Q3 437 aa2.25□□□□□ -2.05
CHD9-218ENST00000566029 SHANK2-AS3Q9BTD1 123 aa2.25□□□□□ -2.05
CHD9-218ENST00000566029 DEFB127Q9H1M4 99 aa2.25□□□□□ -2.05
CHD9-218ENST00000566029 BRWD1Q9NSI6 2320 aa2.25□□□□□ -2.05
CHD9-218ENST00000566029 IGHV3OR15-7A0A075B7D8 119 aa2.24□□□□□ -2.05
CHD9-218ENST00000566029 PAX4O43316 350 aa2.24□□□□□ -2.05
CHD9-218ENST00000566029 TMEM141Q96I45 108 aa2.24□□□□□ -2.05
CHD9-218ENST00000566029 TOMM7Q9P0U1 55 aa2.24□□□□□ -2.05
CHD9-218ENST00000566029 WT1-ASQ06250 92 aa2.24□□□□□ -2.05
CHD9-218ENST00000566029 ZNRF1Q8ND25 227 aa2.24□□□□□ -2.05
CHD9-218ENST00000566029 IMMP1LQ96LU5 166 aa2.24□□□□□ -2.05
CHD9-218ENST00000566029 SPRY4Q9C004 299 aa2.24□□□□□ -2.05
CHD9-218ENST00000566029 SPTAN1Q13813 2472 aaKnown RBP2.24□□□□□ -2.05
CHD9-218ENST00000566029 IGLV2-18A0A075B6J9 118 aa2.24□□□□□ -2.05
CHD9-218ENST00000566029 A0A0B4J2C4 111 aa2.24□□□□□ -2.05
CHD9-218ENST00000566029 ATP6V0E1O15342 81 aa2.24□□□□□ -2.05
CHD9-218ENST00000566029 C20orf197Q8N268 126 aa2.24□□□□□ -2.05
CHD9-218ENST00000566029 LEAP2Q969E1 77 aa2.24□□□□□ -2.05
CHD9-218ENST00000566029 CACNA1HO95180 2353 aa2.24□□□□□ -2.05
CHD9-218ENST00000566029 FREM1Q5H8C1 2179 aa2.24□□□□□ -2.05
CHD9-218ENST00000566029 PLA2G2AP14555 144 aa2.24□□□□□ -2.05
CHD9-218ENST00000566029 C9orf66Q5T8R8 295 aa2.24□□□□□ -2.05
CHD9-218ENST00000566029 ZNF575Q86XF7 245 aa2.24□□□□□ -2.05
CHD9-218ENST00000566029 GVINP1Q7Z2Y8 2422 aa2.24□□□□□ -2.05
CHD9-218ENST00000566029 IGLV4-60A0A075B6I1 120 aa2.24□□□□□ -2.05
CHD9-218ENST00000566029 VCYO14598 125 aa2.24□□□□□ -2.05
CHD9-218ENST00000566029 Q96MF0 132 aa2.24□□□□□ -2.05
CHD9-218ENST00000566029 IGHV1-69DA0A0B4J2H0 117 aa2.24□□□□□ -2.05
CHD9-218ENST00000566029 MED14OSP0DP75 135 aa2.24□□□□□ -2.05
CHD9-218ENST00000566029 DAZ2Q13117 558 aaKnown RBP2.24□□□□□ -2.05
CHD9-218ENST00000566029 DAZ4Q86SG3 579 aaKnown RBP2.24□□□□□ -2.05
CHD9-218ENST00000566029 DAZ3Q9NR90 486 aaKnown RBP2.24□□□□□ -2.05
CHD9-218ENST00000566029 WNK1Q9H4A3 2382 aa2.24□□□□□ -2.05
CHD9-218ENST00000566029 IGLV5-45A0A087WSX0 123 aa2.24□□□□□ -2.05
CHD9-218ENST00000566029 CFC1BP0CG36 223 aa2.24□□□□□ -2.05
CHD9-218ENST00000566029 CFC1P0CG37 223 aa2.24□□□□□ -2.05
CHD9-218ENST00000566029 EGR2P11161 476 aaPredicted RBP2.24□□□□□ -2.05
CHD9-218ENST00000566029 CCL4P13236 92 aa2.24□□□□□ -2.05
CHD9-218ENST00000566029 CCL8P80075 99 aa2.24□□□□□ -2.05
CHD9-218ENST00000566029 ANKRD17O75179 2603 aaKnown RBP2.24□□□□□ -2.05
CHD9-218ENST00000566029 SLC25A29Q8N8R3 303 aa2.24□□□□□ -2.05
CHD9-218ENST00000566029 TRBV10-2A0A0K0K1G8 114 aa2.23□□□□□ -2.05
CHD9-218ENST00000566029 ELOF1P60002 83 aaKnown RBP2.23□□□□□ -2.05
CHD9-218ENST00000566029 SLC25A45Q8N413 288 aa2.23□□□□□ -2.05
CHD9-218ENST00000566029 CHKB-CPT1BH3BT56 60 aa2.23□□□□□ -2.05
CHD9-218ENST00000566029 RPL36AP83881 106 aaKnown RBP2.23□□□□□ -2.05
CHD9-218ENST00000566029 MDS2Q8NDY4 140 aa2.23□□□□□ -2.05
CHD9-218ENST00000566029 RPL36ALQ969Q0 106 aaKnown RBP2.23□□□□□ -2.05
CHD9-218ENST00000566029 IGHV3-33P01772 117 aa2.23□□□□□ -2.05
CHD9-218ENST00000566029 TMEM75Q8N9X5 138 aa2.23□□□□□ -2.05
CHD9-218ENST00000566029 IGLV7-43P04211 117 aa2.23□□□□□ -2.05
CHD9-218ENST00000566029 RPL37AP61513 92 aaKnown RBP2.23□□□□□ -2.05
CHD9-218ENST00000566029 A6NED7 52 aa2.23□□□□□ -2.05
CHD9-218ENST00000566029 IGLV2-23P01705 113 aa2.23□□□□□ -2.05
CHD9-218ENST00000566029 TMEM263Q8WUH6 116 aaKnown RBP2.23□□□□□ -2.05
CHD9-218ENST00000566029 TRBV27A0A0K0K1C4 114 aa2.23□□□□□ -2.05
CHD9-218ENST00000566029 PINLYPA6NC86 204 aa2.23□□□□□ -2.05
CHD9-218ENST00000566029 DEFB133Q30KQ1 61 aa2.23□□□□□ -2.05
CHD9-218ENST00000566029 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.23□□□□□ -2.051e-6■■■■□ 25.3
CHD9-218ENST00000566029 BUB1B-PAK6H3BSN5 160 aa2.23□□□□□ -2.05
CHD9-218ENST00000566029 MIAQ16674 131 aa2.23□□□□□ -2.05
CHD9-218ENST00000566029 IGKV1D-17A0A075B6S4 117 aa2.23□□□□□ -2.05
CHD9-218ENST00000566029 IGHV1-58A0A0C4DH39 117 aa2.23□□□□□ -2.05
CHD9-218ENST00000566029 A0A0J9YXY3 114 aa2.23□□□□□ -2.05
CHD9-218ENST00000566029 LINC00528Q8N1L1 170 aa2.23□□□□□ -2.05
CHD9-218ENST00000566029 FAM110DQ8TAY7 271 aaPredicted RBP2.23□□□□□ -2.05
CHD9-218ENST00000566029 CCL13Q99616 98 aa2.23□□□□□ -2.05
CHD9-218ENST00000566029 EPM2AB3EWF7 344 aa2.23□□□□□ -2.05
CHD9-218ENST00000566029 NEXN-AS1Q8NBZ9 246 aa2.23□□□□□ -2.05
CHD9-218ENST00000566029 ORMDL1Q9P0S3 153 aa2.23□□□□□ -2.05
CHD9-218ENST00000566029 IGHV3-66A0A0C4DH42 116 aa2.23□□□□□ -2.05
CHD9-218ENST00000566029 A0A0J9YY99 117 aa2.23□□□□□ -2.05
CHD9-218ENST00000566029 IGHV3-23P01764 117 aa2.23□□□□□ -2.05
CHD9-218ENST00000566029 C10orf55Q5SWW7 151 aa2.23□□□□□ -2.05
CHD9-218ENST00000566029 NCOR2Q9Y618 2525 aa2.23□□□□□ -2.05
CHD9-218ENST00000566029 TRAV13-2A0A0B4J235 113 aa2.22□□□□□ -2.05
CHD9-218ENST00000566029 CRYGAP11844 174 aa2.22□□□□□ -2.05
CHD9-218ENST00000566029 SS18Q15532 418 aa2.22□□□□□ -2.05
CHD9-218ENST00000566029 CLEC2BQ92478 149 aa2.22□□□□□ -2.05
CHD9-218ENST00000566029 C2orf48Q96LS8 159 aa2.22□□□□□ -2.05
CHD9-218ENST00000566029 LINC00574Q9H8X3 128 aa2.22□□□□□ -2.05
CHD9-218ENST00000566029 NUPR2A6NF83 97 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 158.8 ms