RNA–Protein interactions for RNA: ENST00000566009.5

SMPD3-206, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-206ENST00000566009 TIMM9Q9Y5J7 89 aa5.12□□□□□ -1.59
SMPD3-206ENST00000566009 MUC12Q9UKN1 5478 aa5.12□□□□□ -1.59
SMPD3-206ENST00000566009 A0A087WZ39 114 aa5.11□□□□□ -1.59
SMPD3-206ENST00000566009 A0A087X002 238 aa5.11□□□□□ -1.59
SMPD3-206ENST00000566009 TRAV8-4A0A0B4J246 113 aa5.11□□□□□ -1.59
SMPD3-206ENST00000566009 P01737 135 aa5.11□□□□□ -1.59
SMPD3-206ENST00000566009 NBEAP1P0C6P0 100 aa5.11□□□□□ -1.59
SMPD3-206ENST00000566009 RPL12P30050 165 aaKnown RBP5.11□□□□□ -1.59
SMPD3-206ENST00000566009 RBX1P62877 108 aa5.11□□□□□ -1.59
SMPD3-206ENST00000566009 KRTAP13-3Q3SY46 172 aa5.11□□□□□ -1.59
SMPD3-206ENST00000566009 THAP6Q8TBB0 222 aa5.11□□□□□ -1.59
SMPD3-206ENST00000566009 SCGB1C1Q8TD33 95 aa5.11□□□□□ -1.59
SMPD3-206ENST00000566009 CHCHD5Q9BSY4 110 aa5.11□□□□□ -1.59
SMPD3-206ENST00000566009 WDR61Q9GZS3 305 aaKnown RBP5.11□□□□□ -1.59
SMPD3-206ENST00000566009 FLGP20930 4061 aaPredicted RBP5.1□□□□□ -1.59
SMPD3-206ENST00000566009 PET100P0DJ07 73 aa5.1□□□□□ -1.59
SMPD3-206ENST00000566009 PYYP10082 97 aa5.1□□□□□ -1.59
SMPD3-206ENST00000566009 PTTG1IPP53801 180 aa5.1□□□□□ -1.59
SMPD3-206ENST00000566009 PKIAP61925 76 aa5.1□□□□□ -1.59
SMPD3-206ENST00000566009 PDE6HQ13956 83 aa5.1□□□□□ -1.59
SMPD3-206ENST00000566009 GCSAMLQ5JQS6 135 aa5.1□□□□□ -1.59
SMPD3-206ENST00000566009 MIR17HGQ75NE6 70 aa5.1□□□□□ -1.59
SMPD3-206ENST00000566009 KRTAP11-1Q8IUC1 163 aa5.1□□□□□ -1.59
SMPD3-206ENST00000566009 PTH2Q96A98 100 aa5.1□□□□□ -1.59
SMPD3-206ENST00000566009 FAM167A-AS1Q96KT0 104 aa5.1□□□□□ -1.59
SMPD3-206ENST00000566009 AAMDCQ9H7C9 122 aa5.1□□□□□ -1.59
SMPD3-206ENST00000566009 KCNIP2Q9NS61 270 aa5.1□□□□□ -1.59
SMPD3-206ENST00000566009 HSPB11Q9Y547 144 aa5.1□□□□□ -1.59
SMPD3-206ENST00000566009 TSHBP01222 138 aa5.09□□□□□ -1.59
SMPD3-206ENST00000566009 GIPP09681 153 aaPredicted RBP5.09□□□□□ -1.59
SMPD3-206ENST00000566009 CFC1P0CG37 223 aa5.09□□□□□ -1.59
SMPD3-206ENST00000566009 RAB2AP61019 212 aa5.09□□□□□ -1.59
SMPD3-206ENST00000566009 UBE2D3P61077 147 aa5.09□□□□□ -1.59
SMPD3-206ENST00000566009 UBE2D2P62837 147 aa5.09□□□□□ -1.59
SMPD3-206ENST00000566009 GAGE2BQ13066 116 aa5.09□□□□□ -1.59
SMPD3-206ENST00000566009 C9orf116Q5BN46 136 aaPredicted RBP5.09□□□□□ -1.59
SMPD3-206ENST00000566009 HYLS1Q96M11 299 aa5.09□□□□□ -1.59
SMPD3-206ENST00000566009 SLC25A2Q9BXI2 301 aa5.09□□□□□ -1.59
SMPD3-206ENST00000566009 SMIM3Q9BZL3 60 aa5.09□□□□□ -1.59
SMPD3-206ENST00000566009 A8MWV9 139 aa5.08□□□□□ -1.6
SMPD3-206ENST00000566009 RANP62826 216 aaKnown RBP5.08□□□□□ -1.6
SMPD3-206ENST00000566009 ZNF674Q2M3X9 581 aa5.08□□□□□ -1.6
SMPD3-206ENST00000566009 UFSP1Q6NVU6 142 aa5.08□□□□□ -1.6
SMPD3-206ENST00000566009 ASB13Q8WXK3 278 aa5.08□□□□□ -1.6
SMPD3-206ENST00000566009 WFDC1Q9HC57 220 aa5.08□□□□□ -1.6
SMPD3-206ENST00000566009 LINC00846Q9NV44 126 aa5.08□□□□□ -1.6
SMPD3-206ENST00000566009 MBD2Q9UBB5 411 aa5.08□□□□□ -1.6
SMPD3-206ENST00000566009 TRAV21A0A0B4J279 112 aa5.07□□□□□ -1.6
SMPD3-206ENST00000566009 A0A1W2PPV4 95 aa5.07□□□□□ -1.6
SMPD3-206ENST00000566009 CSN1S1P47710 185 aa5.07□□□□□ -1.6
SMPD3-206ENST00000566009 TAS2R45P59539 299 aa5.07□□□□□ -1.6
SMPD3-206ENST00000566009 GAGE6Q13070 117 aa5.07□□□□□ -1.6
SMPD3-206ENST00000566009 FXYD5Q96DB9 178 aa5.07□□□□□ -1.6
SMPD3-206ENST00000566009 FAM210AQ96ND0 272 aa5.07□□□□□ -1.6
SMPD3-206ENST00000566009 JPT2Q9H910 190 aa5.07□□□□□ -1.6
SMPD3-206ENST00000566009 TRBV7-3A0A075B6L6 115 aa5.06□□□□□ -1.6
SMPD3-206ENST00000566009 GVQW2A0A096LPI5 108 aaPredicted RBP5.06□□□□□ -1.6
SMPD3-206ENST00000566009 LCE2BO14633 110 aa5.06□□□□□ -1.6
SMPD3-206ENST00000566009 OR7C2O60412 319 aa5.06□□□□□ -1.6
SMPD3-206ENST00000566009 RPL36AP83881 106 aaKnown RBP5.06□□□□□ -1.6
SMPD3-206ENST00000566009 TEX261Q6UWH6 196 aa5.06□□□□□ -1.6
SMPD3-206ENST00000566009 LINC00304Q8N9R0 145 aa5.06□□□□□ -1.6
SMPD3-206ENST00000566009 TSKUQ8WUA8 353 aa5.06□□□□□ -1.6
SMPD3-206ENST00000566009 RPL36ALQ969Q0 106 aaKnown RBP5.06□□□□□ -1.6
SMPD3-206ENST00000566009 LENEPQ9Y5L5 61 aa5.06□□□□□ -1.6
SMPD3-206ENST00000566009 RBAKDNA6NC62 111 aa5.05□□□□□ -1.6
SMPD3-206ENST00000566009 GAGE12HA6NDE8 117 aa5.05□□□□□ -1.6
SMPD3-206ENST00000566009 HMSDA8MTL9 139 aa5.05□□□□□ -1.6
SMPD3-206ENST00000566009 NDUFA5Q16718 116 aa5.05□□□□□ -1.6
SMPD3-206ENST00000566009 KHDC3LQ587J8 217 aa5.05□□□□□ -1.6
SMPD3-206ENST00000566009 FAM74A1Q5RGS3 127 aa5.05□□□□□ -1.6
SMPD3-206ENST00000566009 TMUB2Q71RG4 321 aa5.05□□□□□ -1.6
SMPD3-206ENST00000566009 PHYHIPLQ96FC7 376 aa5.05□□□□□ -1.6
SMPD3-206ENST00000566009 CARD19Q96LW7 228 aa5.05□□□□□ -1.6
SMPD3-206ENST00000566009 FXYD6-FXYD2A0A087WZ82 144 aa5.04□□□□□ -1.6
SMPD3-206ENST00000566009 LINC00862A6NCI5 91 aa5.04□□□□□ -1.6
SMPD3-206ENST00000566009 UBE2L3P68036 154 aaKnown RBP5.04□□□□□ -1.6
SMPD3-206ENST00000566009 SERF2P84101 59 aa5.04□□□□□ -1.6
SMPD3-206ENST00000566009 PQLC2Q6ZP29 291 aa5.04□□□□□ -1.6
SMPD3-206ENST00000566009 C20orf203Q8NBC4 194 aa5.04□□□□□ -1.6
SMPD3-206ENST00000566009 CMTM2Q8TAZ6 248 aa5.04□□□□□ -1.6
SMPD3-206ENST00000566009 AQP10Q96PS8 301 aa5.04□□□□□ -1.6
SMPD3-206ENST00000566009 OTORQ9NRC9 128 aa5.04□□□□□ -1.6
SMPD3-206ENST00000566009 TRBV10-1A0A0K0K1A3 114 aa5.03□□□□□ -1.6
SMPD3-206ENST00000566009 HMGB3O15347 200 aaKnown RBP5.03□□□□□ -1.6
SMPD3-206ENST00000566009 ARPC5O15511 151 aa5.03□□□□□ -1.6
SMPD3-206ENST00000566009 MBP02144 154 aa5.03□□□□□ -1.6
SMPD3-206ENST00000566009 RNASE3P12724 160 aaKnown RBP5.03□□□□□ -1.6
SMPD3-206ENST00000566009 EIF5AL1Q6IS14 154 aaKnown RBP5.03□□□□□ -1.6
SMPD3-206ENST00000566009 NTM-AS1Q6ZSK4 140 aa5.03□□□□□ -1.6
SMPD3-206ENST00000566009 FP248Q71RG6 208 aaPredicted RBP5.03□□□□□ -1.6
SMPD3-206ENST00000566009 LINC00526Q96FQ7 95 aa5.03□□□□□ -1.6
SMPD3-206ENST00000566009 PSMG3Q9BT73 122 aaPredicted RBP5.03□□□□□ -1.6
SMPD3-206ENST00000566009 TNFSF18Q9UNG2 199 aa5.03□□□□□ -1.6
SMPD3-206ENST00000566009 LOC107984640A0A0U1RRK4 108 aa5.02□□□□□ -1.61
SMPD3-206ENST00000566009 STAG3L2P0CL84 134 aa5.02□□□□□ -1.61
SMPD3-206ENST00000566009 STAG3L3P0CL85 134 aa5.02□□□□□ -1.61
SMPD3-206ENST00000566009 ATP6V0CP27449 155 aa5.02□□□□□ -1.61
SMPD3-206ENST00000566009 CDC34P49427 236 aaPredicted RBP5.02□□□□□ -1.61
SMPD3-206ENST00000566009 CTAG1AP78358 180 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms