RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 NPSP0C0P6 89 aa9.05□□□□□ -0.96
SF3B3-206ENST00000565990 IFI27P40305 119 aaPredicted RBP9.05□□□□□ -0.96
SF3B3-206ENST00000565990 BVES-AS1Q5T3Y7 98 aa9.05□□□□□ -0.96
SF3B3-206ENST00000565990 AMN1Q8IY45 258 aa9.05□□□□□ -0.96
SF3B3-206ENST00000565990 RNASE8Q8TDE3 154 aaKnown RBP9.05□□□□□ -0.96
SF3B3-206ENST00000565990 IFI27L1Q96BM0 104 aa9.05□□□□□ -0.96
SF3B3-206ENST00000565990 C11orf68Q9H3H3 251 aaKnown RBP9.05□□□□□ -0.96
SF3B3-206ENST00000565990 C11orf21Q9P2W6 132 aa9.05□□□□□ -0.96
SF3B3-206ENST00000565990 IGKV3D-20A0A0C4DH25 116 aa9.04□□□□□ -0.96
SF3B3-206ENST00000565990 SNAI2O43623 268 aa9.04□□□□□ -0.96
SF3B3-206ENST00000565990 ATP5LO75964 103 aa9.04□□□□□ -0.96
SF3B3-206ENST00000565990 FCER1GP30273 86 aa9.04□□□□□ -0.96
SF3B3-206ENST00000565990 TWIST1Q15672 202 aa9.04□□□□□ -0.96
SF3B3-206ENST00000565990 FAM159AQ6UWV7 190 aa9.04□□□□□ -0.96
SF3B3-206ENST00000565990 C11orf72Q8NBR9 251 aa9.04□□□□□ -0.96
SF3B3-206ENST00000565990 TMEM263Q8WUH6 116 aaKnown RBP9.04□□□□□ -0.96
SF3B3-206ENST00000565990 C16orf74Q96GX8 76 aa9.04□□□□□ -0.96
SF3B3-206ENST00000565990 CBY1Q9Y3M2 126 aa9.04□□□□□ -0.96
SF3B3-206ENST00000565990 A0A0J9YWU9 116 aa9.03□□□□□ -0.96
SF3B3-206ENST00000565990 hDV102S1A0JD36 115 aa9.03□□□□□ -0.96
SF3B3-206ENST00000565990 LINC01549A6NIU2 74 aa9.03□□□□□ -0.96
SF3B3-206ENST00000565990 K7EP13 123 aa9.03□□□□□ -0.96
SF3B3-206ENST00000565990 GNRH2O43555 120 aa9.03□□□□□ -0.96
SF3B3-206ENST00000565990 ORM1P02763 201 aa9.03□□□□□ -0.96
SF3B3-206ENST00000565990 HTN1P15515 57 aa9.03□□□□□ -0.96
SF3B3-206ENST00000565990 PTTG1IPP53801 180 aa9.03□□□□□ -0.96
SF3B3-206ENST00000565990 Q8N8P6 123 aa9.03□□□□□ -0.96
SF3B3-206ENST00000565990 RNF185Q96GF1 192 aa9.03□□□□□ -0.96
SF3B3-206ENST00000565990 TPPP3Q9BW30 176 aa9.03□□□□□ -0.96
SF3B3-206ENST00000565990 STAB2Q8WWQ8 2551 aa9.03□□□□□ -0.96
SF3B3-206ENST00000565990 CBY3A6NI87 242 aa9.02□□□□□ -0.97
SF3B3-206ENST00000565990 DEFB4AO15263 64 aa9.02□□□□□ -0.97
SF3B3-206ENST00000565990 NUDT3O95989 172 aa9.02□□□□□ -0.97
SF3B3-206ENST00000565990 HSD52Q0P140 79 aa9.02□□□□□ -0.97
SF3B3-206ENST00000565990 MUC21Q5SSG8 566 aa9.02□□□□□ -0.97
SF3B3-206ENST00000565990 BOD1L2Q8IYS8 172 aa9.02□□□□□ -0.97
SF3B3-206ENST00000565990 MRAP2Q96G30 205 aa9.02□□□□□ -0.97
SF3B3-206ENST00000565990 IGHV3-16A0A0C4DH30 117 aa9.01□□□□□ -0.97
SF3B3-206ENST00000565990 A6NDN8 102 aa9.01□□□□□ -0.97
SF3B3-206ENST00000565990 PPP1R17O96001 155 aa9.01□□□□□ -0.97
SF3B3-206ENST00000565990 NPYP01303 97 aa9.01□□□□□ -0.97
SF3B3-206ENST00000565990 DAZ2Q13117 558 aaKnown RBP9.01□□□□□ -0.97
SF3B3-206ENST00000565990 MPV17L2Q567V2 206 aa9.01□□□□□ -0.97
SF3B3-206ENST00000565990 IL17DQ8TAD2 202 aa9.01□□□□□ -0.97
SF3B3-206ENST00000565990 MDFICQ9P1T7 246 aa9.01□□□□□ -0.97
SF3B3-206ENST00000565990 HIGD1BQ9P298 99 aa9.01□□□□□ -0.97
SF3B3-206ENST00000565990 DKK2Q9UBU2 259 aa9.01□□□□□ -0.97
SF3B3-206ENST00000565990 MUC4Q99102 2169 aa9□□□□□ -0.97
SF3B3-206ENST00000565990 TRGV11A0A075B6L2 103 aa9□□□□□ -0.97
SF3B3-206ENST00000565990 TMSB15BA0A087X1C1 80 aa9□□□□□ -0.97
SF3B3-206ENST00000565990 TAX1BP3O14907 124 aa9□□□□□ -0.97
SF3B3-206ENST00000565990 TNFRSF6BO95407 300 aa9□□□□□ -0.97
SF3B3-206ENST00000565990 FGF6P10767 208 aa9□□□□□ -0.97
SF3B3-206ENST00000565990 C2orf91Q6ZV80 131 aa9□□□□□ -0.97
SF3B3-206ENST00000565990 LINC00612Q8N6U2 182 aa9□□□□□ -0.97
SF3B3-206ENST00000565990 TIMM8BQ9Y5J9 83 aaPredicted RBP9□□□□□ -0.97
SF3B3-206ENST00000565990 LYRM9A8MSI8 78 aa8.99□□□□□ -0.97
SF3B3-206ENST00000565990 M0R381 172 aa8.99□□□□□ -0.97
SF3B3-206ENST00000565990 SPART-AS1P0CW21 52 aa8.99□□□□□ -0.97
SF3B3-206ENST00000565990 EVI2AP22794 236 aa8.99□□□□□ -0.97
SF3B3-206ENST00000565990 TMEM97Q5BJF2 176 aa8.99□□□□□ -0.97
SF3B3-206ENST00000565990 PTH2Q96A98 100 aa8.99□□□□□ -0.97
SF3B3-206ENST00000565990 IGLV2-18A0A075B6J9 118 aa8.98□□□□□ -0.97
SF3B3-206ENST00000565990 LOC389332A0A1B0GUA5 103 aa8.98□□□□□ -0.97
SF3B3-206ENST00000565990 H3BRM9 83 aa8.98□□□□□ -0.97
SF3B3-206ENST00000565990 RNASE3P12724 160 aaKnown RBP8.98□□□□□ -0.97
SF3B3-206ENST00000565990 EMP1P54849 157 aa8.98□□□□□ -0.97
SF3B3-206ENST00000565990 C12orf74Q32Q52 190 aa8.98□□□□□ -0.97
SF3B3-206ENST00000565990 FAM222AQ5U5X8 452 aa8.98□□□□□ -0.97
SF3B3-206ENST00000565990 RASL10AQ92737 203 aa8.98□□□□□ -0.97
SF3B3-206ENST00000565990 C9orf85Q96MD7 179 aa8.98□□□□□ -0.97
SF3B3-206ENST00000565990 SPXQ9BT56 116 aa8.98□□□□□ -0.97
SF3B3-206ENST00000565990 CCL25O15444 150 aa8.97□□□□□ -0.97
SF3B3-206ENST00000565990 NCR2O95944 276 aa8.97□□□□□ -0.97
SF3B3-206ENST00000565990 RPL32P62910 135 aaKnown RBP8.97□□□□□ -0.97
SF3B3-206ENST00000565990 ZNF415Q09FC8 603 aa8.97□□□□□ -0.97
SF3B3-206ENST00000565990 OR4C5Q8NGB2 326 aa8.97□□□□□ -0.97
SF3B3-206ENST00000565990 C11orf45Q8TAV5 145 aa8.97□□□□□ -0.97
SF3B3-206ENST00000565990 C20orf78Q9BR46 151 aa8.97□□□□□ -0.97
SF3B3-206ENST00000565990 NOP10Q9NPE3 64 aaKnown RBP8.97□□□□□ -0.97
SF3B3-206ENST00000565990 CELA1Q9UNI1 258 aa8.97□□□□□ -0.97
SF3B3-206ENST00000565990 TRAV12-1A0A0B4J245 112 aa8.96□□□□□ -0.98
SF3B3-206ENST00000565990 MUC21A0A0G2JKD1 596 aa8.96□□□□□ -0.98
SF3B3-206ENST00000565990 MUC21A0A140T8X8 626 aa8.96□□□□□ -0.98
SF3B3-206ENST00000565990 TEX48A0A1B0GUV7 120 aa8.96□□□□□ -0.98
SF3B3-206ENST00000565990 ODF1Q14990 250 aa8.96□□□□□ -0.98
SF3B3-206ENST00000565990 VAMP3Q15836 100 aa8.96□□□□□ -0.98
SF3B3-206ENST00000565990 ANKRD39Q53RE8 183 aa8.96□□□□□ -0.98
SF3B3-206ENST00000565990 C18orf15Q96N68 181 aa8.96□□□□□ -0.98
SF3B3-206ENST00000565990 WWC2-AS2Q96NR7 200 aa8.96□□□□□ -0.98
SF3B3-206ENST00000565990 DPM2O94777 84 aa8.95□□□□□ -0.98
SF3B3-206ENST00000565990 ASIPP42127 132 aa8.95□□□□□ -0.98
SF3B3-206ENST00000565990 LAGE3Q14657 143 aa8.95□□□□□ -0.98
SF3B3-206ENST00000565990 TAL2Q16559 108 aa8.95□□□□□ -0.98
SF3B3-206ENST00000565990 ORMDL2Q53FV1 153 aa8.95□□□□□ -0.98
SF3B3-206ENST00000565990 PIK3CD-AS1Q5SR53 167 aa8.95□□□□□ -0.98
SF3B3-206ENST00000565990 NRACQ8N912 160 aa8.95□□□□□ -0.98
SF3B3-206ENST00000565990 H0Y8G0 127 aa8.94□□□□□ -0.98
SF3B3-206ENST00000565990 M0R2P5 195 aa8.94□□□□□ -0.98
SF3B3-206ENST00000565990 IGKCP01834 107 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms