RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 IGHV1-3A0A0C4DH29 117 aa3.03□□□□□ -1.92
LINC00561-201ENST00000565815 A0A0G2JLM5 398 aa3.03□□□□□ -1.92
LINC00561-201ENST00000565815 A0A1W2PPM0 123 aa3.03□□□□□ -1.92
LINC00561-201ENST00000565815 BUB1B-PAK6H3BSN5 160 aa3.03□□□□□ -1.92
LINC00561-201ENST00000565815 NDUFA3O95167 84 aa3.03□□□□□ -1.92
LINC00561-201ENST00000565815 SMIM13P0DJ93 91 aa3.03□□□□□ -1.92
LINC00561-201ENST00000565815 CCL3L1P16619 93 aa3.03□□□□□ -1.92
LINC00561-201ENST00000565815 FCER1GP30273 86 aa3.03□□□□□ -1.92
LINC00561-201ENST00000565815 SPRNQ5BIV9 151 aa3.03□□□□□ -1.92
LINC00561-201ENST00000565815 FAM201AQ5SY85 155 aa3.03□□□□□ -1.92
LINC00561-201ENST00000565815 DUX4L9Q6RFH8 374 aaPredicted RBP3.03□□□□□ -1.92
LINC00561-201ENST00000565815 TRAV8-6A0A0B4J262 113 aa3.02□□□□□ -1.93
LINC00561-201ENST00000565815 IGHV1-69DA0A0B4J2H0 117 aa3.02□□□□□ -1.93
LINC00561-201ENST00000565815 IGKV1-17P01599 117 aa3.02□□□□□ -1.93
LINC00561-201ENST00000565815 IGHV1-69P01742 117 aa3.02□□□□□ -1.93
LINC00561-201ENST00000565815 GIG44P09565 113 aaPredicted RBP3.02□□□□□ -1.93
LINC00561-201ENST00000565815 IGLC6P0CF74 106 aa3.02□□□□□ -1.93
LINC00561-201ENST00000565815 KRTAP10-3P60369 221 aa3.02□□□□□ -1.93
LINC00561-201ENST00000565815 KRTAP10-12P60413 245 aa3.02□□□□□ -1.93
LINC00561-201ENST00000565815 EGFEM1PQ0D2K5 195 aa3.02□□□□□ -1.93
LINC00561-201ENST00000565815 LINC01620Q4KN68 170 aa3.02□□□□□ -1.93
LINC00561-201ENST00000565815 C10orf55Q5SWW7 151 aa3.02□□□□□ -1.93
LINC00561-201ENST00000565815 LINC00242Q5T6M2 205 aa3.02□□□□□ -1.93
LINC00561-201ENST00000565815 HCP5Q6MZN7 132 aa3.02□□□□□ -1.93
LINC00561-201ENST00000565815 LINC00173Q6ZV60 143 aa3.02□□□□□ -1.93
LINC00561-201ENST00000565815 MUC7Q8TAX7 377 aa3.02□□□□□ -1.93
LINC00561-201ENST00000565815 RPEQ96AT9 228 aa3.02□□□□□ -1.93
LINC00561-201ENST00000565815 VCX2Q9H322 139 aa3.02□□□□□ -1.93
LINC00561-201ENST00000565815 VPREB3Q9UKI3 123 aa3.02□□□□□ -1.93
LINC00561-201ENST00000565815 A0A096LNJ9 63 aa3.02□□□□□ -1.93
LINC00561-201ENST00000565815 D6R8Y8 96 aa3.02□□□□□ -1.93
LINC00561-201ENST00000565815 F8W1H4 67 aa3.02□□□□□ -1.93
LINC00561-201ENST00000565815 LY6LH3BQJ8 138 aa3.02□□□□□ -1.93
LINC00561-201ENST00000565815 K7EIM0 57 aa3.02□□□□□ -1.93
LINC00561-201ENST00000565815 M0R1W7 72 aa3.02□□□□□ -1.93
LINC00561-201ENST00000565815 SH2D1AO60880 128 aa3.02□□□□□ -1.93
LINC00561-201ENST00000565815 CKS2P33552 79 aa3.02□□□□□ -1.93
LINC00561-201ENST00000565815 CACNG7P62955 275 aa3.02□□□□□ -1.93
LINC00561-201ENST00000565815 CXCL6P80162 114 aa3.02□□□□□ -1.93
LINC00561-201ENST00000565815 MTURNQ8N3F0 131 aa3.02□□□□□ -1.93
LINC00561-201ENST00000565815 SLC50A1Q9BRV3 221 aa3.02□□□□□ -1.93
LINC00561-201ENST00000565815 ROS1P08922 2347 aa3.02□□□□□ -1.93
LINC00561-201ENST00000565815 TRAV40A0A0B4J280 105 aa3.01□□□□□ -1.93
LINC00561-201ENST00000565815 FABP5P3A8MUU1 101 aa3.01□□□□□ -1.93
LINC00561-201ENST00000565815 NBR2O15453 112 aa3.01□□□□□ -1.93
LINC00561-201ENST00000565815 PLNP26678 52 aa3.01□□□□□ -1.93
LINC00561-201ENST00000565815 IFI27P40305 119 aaPredicted RBP3.01□□□□□ -1.93
LINC00561-201ENST00000565815 CCL8P80075 99 aa3.01□□□□□ -1.93
LINC00561-201ENST00000565815 MRPL51Q4U2R6 128 aaKnown RBP3.01□□□□□ -1.93
LINC00561-201ENST00000565815 LYZL1Q6UWQ5 148 aa3.01□□□□□ -1.93
LINC00561-201ENST00000565815 TTC9CQ8N5M4 171 aa3.01□□□□□ -1.93
LINC00561-201ENST00000565815 Q8N8P6 123 aa3.01□□□□□ -1.93
LINC00561-201ENST00000565815 CSNK1G2-AS1Q8NCQ2 148 aa3.01□□□□□ -1.93
LINC00561-201ENST00000565815 OR11H6Q8NGC7 330 aa3.01□□□□□ -1.93
LINC00561-201ENST00000565815 OR8A1Q8NGG7 326 aa3.01□□□□□ -1.93
LINC00561-201ENST00000565815 CCL17Q92583 94 aa3.01□□□□□ -1.93
LINC00561-201ENST00000565815 LENEPQ9Y5L5 61 aa3.01□□□□□ -1.93
LINC00561-201ENST00000565815 SPCS1Q9Y6A9 102 aa3.01□□□□□ -1.93
LINC00561-201ENST00000565815 CADP27708 2225 aa3.01□□□□□ -1.93
LINC00561-201ENST00000565815 TRAV12-1A0A0B4J245 112 aa3.01□□□□□ -1.93
LINC00561-201ENST00000565815 K7EIL1 84 aa3.01□□□□□ -1.93
LINC00561-201ENST00000565815 GNG7O60262 68 aa3.01□□□□□ -1.93
LINC00561-201ENST00000565815 DPM2O94777 84 aa3.01□□□□□ -1.93
LINC00561-201ENST00000565815 PPP1R17O96001 155 aa3.01□□□□□ -1.93
LINC00561-201ENST00000565815 IGKCP01834 107 aa3.01□□□□□ -1.93
LINC00561-201ENST00000565815 DEFB121Q5J5C9 76 aa3.01□□□□□ -1.93
LINC00561-201ENST00000565815 LYRM7Q5U5X0 104 aa3.01□□□□□ -1.93
LINC00561-201ENST00000565815 AMN1Q8IY45 258 aa3.01□□□□□ -1.93
LINC00561-201ENST00000565815 EXOC3-AS1Q8N2X6 119 aa3.01□□□□□ -1.93
LINC00561-201ENST00000565815 LY6G5BQ8NDX9 201 aa3.01□□□□□ -1.93
LINC00561-201ENST00000565815 VSIG2Q96IQ7 327 aa3.01□□□□□ -1.93
LINC00561-201ENST00000565815 IGLV11-55A0A075B6I3 123 aa3□□□□□ -1.93
LINC00561-201ENST00000565815 IGKV3D-20A0A0C4DH25 116 aa3□□□□□ -1.93
LINC00561-201ENST00000565815 H3BUT2 72 aa3□□□□□ -1.93
LINC00561-201ENST00000565815 FCN3O75636 299 aa3□□□□□ -1.93
LINC00561-201ENST00000565815 CNIH1O95406 144 aa3□□□□□ -1.93
LINC00561-201ENST00000565815 IL4P05112 153 aa3□□□□□ -1.93
LINC00561-201ENST00000565815 CRIP1P50238 77 aa3□□□□□ -1.93
LINC00561-201ENST00000565815 MINOS1Q5TGZ0 78 aa3□□□□□ -1.93
LINC00561-201ENST00000565815 FOXI2Q6ZQN5 318 aa3□□□□□ -1.93
LINC00561-201ENST00000565815 Q6ZVH6 145 aa3□□□□□ -1.93
LINC00561-201ENST00000565815 ATP6V0E2Q8NHE4 81 aa3□□□□□ -1.93
LINC00561-201ENST00000565815 ZNF502Q8TBZ5 544 aa3□□□□□ -1.93
LINC00561-201ENST00000565815 MRAP2Q96G30 205 aa3□□□□□ -1.93
LINC00561-201ENST00000565815 ZNRD1Q9P1U0 126 aa3□□□□□ -1.93
LINC00561-201ENST00000565815 DPM3Q9P2X0 92 aa3□□□□□ -1.93
LINC00561-201ENST00000565815 MINOS1-NBL1R4GNA1 71 aa3□□□□□ -1.93
LINC00561-201ENST00000565815 MGAM2Q2M2H8 2515 aa3□□□□□ -1.93
LINC00561-201ENST00000565815 TRAV8-1A0A0A6YYK1 113 aa3□□□□□ -1.93
LINC00561-201ENST00000565815 TMEM238C9JI98 176 aa3□□□□□ -1.93
LINC00561-201ENST00000565815 NCR2O95944 276 aa3□□□□□ -1.93
LINC00561-201ENST00000565815 EBI3Q14213 229 aa3□□□□□ -1.93
LINC00561-201ENST00000565815 CASC10Q5T4H9 136 aa3□□□□□ -1.93
LINC00561-201ENST00000565815 Q8N2B8 174 aa3□□□□□ -1.93
LINC00561-201ENST00000565815 KLHL30-AS1Q8NEE0 82 aa3□□□□□ -1.93
LINC00561-201ENST00000565815 MYOZ3Q8TDC0 251 aa3□□□□□ -1.93
LINC00561-201ENST00000565815 C21orf62Q9NYP8 219 aa3□□□□□ -1.93
LINC00561-201ENST00000565815 PLXNB1O43157 2135 aa3□□□□□ -1.93
LINC00561-201ENST00000565815 TRBV7-9A0A0J9YWB2 115 aa2.99□□□□□ -1.93
LINC00561-201ENST00000565815 A0A1B0GWB2 263 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms