RNA–Protein interactions for RNA: ENST00000565559.5

CAPN3-215, Transcript of calpain 3, humanhuman

TSL 3

Gene CAPN3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-215ENST00000565559 PRR27Q6MZM9 219 aa7.36□□□□□ -1.23
CAPN3-215ENST00000565559 PCNPQ8WW12 178 aaKnown RBP7.36□□□□□ -1.23
CAPN3-215ENST00000565559 DAZAP1Q96EP5 407 aaKnown RBP7.36□□□□□ -1.23
CAPN3-215ENST00000565559 PRO0255Q9UI72 69 aa7.36□□□□□ -1.23
CAPN3-215ENST00000565559 TRAV4A0A0B4J268 109 aa7.35□□□□□ -1.23
CAPN3-215ENST00000565559 GRIFINA4D1Z8 144 aa7.35□□□□□ -1.23
CAPN3-215ENST00000565559 C19orf71A6NCJ1 209 aa7.35□□□□□ -1.23
CAPN3-215ENST00000565559 PGPEP1LA6NFU8 196 aa7.35□□□□□ -1.23
CAPN3-215ENST00000565559 ARMS2P0C7Q2 107 aa7.35□□□□□ -1.23
CAPN3-215ENST00000565559 MGST1P10620 155 aaKnown RBP7.35□□□□□ -1.23
CAPN3-215ENST00000565559 SRIP30626 198 aa7.35□□□□□ -1.23
CAPN3-215ENST00000565559 FHL2Q14192 279 aa7.35□□□□□ -1.23
CAPN3-215ENST00000565559 OCC1Q8TAD7 63 aa7.35□□□□□ -1.23
CAPN3-215ENST00000565559 CIRBP-AS1Q8TBR5 109 aa7.35□□□□□ -1.23
CAPN3-215ENST00000565559 Q9HAA7 133 aa7.35□□□□□ -1.23
CAPN3-215ENST00000565559 TMSB15BA0A087X1C1 80 aa7.34□□□□□ -1.23
CAPN3-215ENST00000565559 H3BVH4 76 aa7.34□□□□□ -1.23
CAPN3-215ENST00000565559 RPS20P60866 119 aaKnown RBP7.34□□□□□ -1.23
CAPN3-215ENST00000565559 PEA15Q15121 130 aa7.34□□□□□ -1.23
CAPN3-215ENST00000565559 OR4C5Q8NGB2 326 aa7.34□□□□□ -1.23
CAPN3-215ENST00000565559 ZNF479Q96JC4 524 aa7.34□□□□□ -1.23
CAPN3-215ENST00000565559 SMIM7Q9BQ49 75 aa7.34□□□□□ -1.23
CAPN3-215ENST00000565559 FAT4Q6V0I7 4981 aa7.34□□□□□ -1.23
CAPN3-215ENST00000565559 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.33□□□□□ -1.24
CAPN3-215ENST00000565559 A8MWV9 139 aa7.33□□□□□ -1.24
CAPN3-215ENST00000565559 P01737 135 aa7.33□□□□□ -1.24
CAPN3-215ENST00000565559 IGHV3-53P01767 116 aa7.33□□□□□ -1.24
CAPN3-215ENST00000565559 HNRNPA3P51991 378 aaKnown RBP7.33□□□□□ -1.24
CAPN3-215ENST00000565559 RPL19P84098 196 aaKnown RBP7.33□□□□□ -1.24
CAPN3-215ENST00000565559 FAM74A3Q4VXF1 159 aa7.33□□□□□ -1.24
CAPN3-215ENST00000565559 TM2D2Q9BX73 214 aa7.33□□□□□ -1.24
CAPN3-215ENST00000565559 HHLA3Q9XRX5 114 aa7.33□□□□□ -1.24
CAPN3-215ENST00000565559 PHLDA3Q9Y5J5 127 aa7.33□□□□□ -1.24
CAPN3-215ENST00000565559 TRGV4A0A0C4DH28 118 aa7.32□□□□□ -1.24
CAPN3-215ENST00000565559 XKRY2A2RUG3 117 aa7.32□□□□□ -1.24
CAPN3-215ENST00000565559 ZNF727A8MUV8 499 aa7.32□□□□□ -1.24
CAPN3-215ENST00000565559 IBA57-AS1B1ANH7 110 aa7.32□□□□□ -1.24
CAPN3-215ENST00000565559 K7EN84 100 aa7.32□□□□□ -1.24
CAPN3-215ENST00000565559 SNAI2O43623 268 aa7.32□□□□□ -1.24
CAPN3-215ENST00000565559 OR5AL1P0C617 328 aa7.32□□□□□ -1.24
CAPN3-215ENST00000565559 SFTA3P0C7M3 94 aa7.32□□□□□ -1.24
CAPN3-215ENST00000565559 GYPEP15421 78 aa7.32□□□□□ -1.24
CAPN3-215ENST00000565559 CEBPGP53567 150 aa7.32□□□□□ -1.24
CAPN3-215ENST00000565559 CRYBA4P53673 196 aa7.32□□□□□ -1.24
CAPN3-215ENST00000565559 IFITM2Q01629 132 aa7.32□□□□□ -1.24
CAPN3-215ENST00000565559 CLLU1Q5K131 121 aa7.32□□□□□ -1.24
CAPN3-215ENST00000565559 CFAP126Q5VTH2 177 aa7.32□□□□□ -1.24
CAPN3-215ENST00000565559 ZFP2Q6ZN57 461 aa7.32□□□□□ -1.24
CAPN3-215ENST00000565559 Q6ZRU5 148 aa7.32□□□□□ -1.24
CAPN3-215ENST00000565559 ZFP82Q8N141 532 aa7.32□□□□□ -1.24
CAPN3-215ENST00000565559 OR2D3Q8NGH3 330 aa7.32□□□□□ -1.24
CAPN3-215ENST00000565559 IGHV3-38A0A0C4DH36 116 aa7.31□□□□□ -1.24
CAPN3-215ENST00000565559 IGLC6P0CF74 106 aa7.31□□□□□ -1.24
CAPN3-215ENST00000565559 LINC01620Q4KN68 170 aa7.31□□□□□ -1.24
CAPN3-215ENST00000565559 LCE5AQ5TCM9 118 aa7.31□□□□□ -1.24
CAPN3-215ENST00000565559 FAM231DQ6ZW35 169 aa7.31□□□□□ -1.24
CAPN3-215ENST00000565559 DPH3P1Q9H4G8 78 aa7.31□□□□□ -1.24
CAPN3-215ENST00000565559 C9JQL5 133 aa7.3□□□□□ -1.24
CAPN3-215ENST00000565559 K7EQD1 137 aa7.3□□□□□ -1.24
CAPN3-215ENST00000565559 GATA1P15976 413 aaPredicted RBP7.3□□□□□ -1.24
CAPN3-215ENST00000565559 TMEM241Q24JQ0 296 aa7.3□□□□□ -1.24
CAPN3-215ENST00000565559 CT83Q5H943 113 aa7.3□□□□□ -1.24
CAPN3-215ENST00000565559 LINC01556Q5JQF7 62 aa7.3□□□□□ -1.24
CAPN3-215ENST00000565559 LINC01551Q86U37 167 aa7.3□□□□□ -1.24
CAPN3-215ENST00000565559 SFRP2Q96HF1 295 aa7.3□□□□□ -1.24
CAPN3-215ENST00000565559 TRBV6-4A0A1B0GX49 114 aa7.29□□□□□ -1.24
CAPN3-215ENST00000565559 F2Z2F3 143 aa7.29□□□□□ -1.24
CAPN3-215ENST00000565559 RHODO00212 210 aa7.29□□□□□ -1.24
CAPN3-215ENST00000565559 WFDC2Q14508 124 aa7.29□□□□□ -1.24
CAPN3-215ENST00000565559 UFSP1Q6NVU6 142 aa7.29□□□□□ -1.24
CAPN3-215ENST00000565559 FER1L6-AS1Q8NA97 138 aa7.29□□□□□ -1.24
CAPN3-215ENST00000565559 CLRN3Q8NCR9 226 aa7.29□□□□□ -1.24
CAPN3-215ENST00000565559 OR10AG1Q8NH19 301 aa7.29□□□□□ -1.24
CAPN3-215ENST00000565559 RNASE7Q9H1E1 156 aaKnown RBP7.29□□□□□ -1.24
CAPN3-215ENST00000565559 RPP21Q9H633 154 aaKnown RBP7.29□□□□□ -1.24
CAPN3-215ENST00000565559 JPT2Q9H910 190 aa7.29□□□□□ -1.24
CAPN3-215ENST00000565559 M0R381 172 aa7.28□□□□□ -1.24
CAPN3-215ENST00000565559 LECT2O14960 151 aa7.28□□□□□ -1.24
CAPN3-215ENST00000565559 GATCO43716 136 aaKnown RBP7.28□□□□□ -1.24
CAPN3-215ENST00000565559 GZMBP10144 247 aa7.28□□□□□ -1.24
CAPN3-215ENST00000565559 CACNG7P62955 275 aa7.28□□□□□ -1.24
CAPN3-215ENST00000565559 SPANXN1Q5VSR9 72 aa7.28□□□□□ -1.24
CAPN3-215ENST00000565559 WDR73Q6P4I2 378 aa7.28□□□□□ -1.24
CAPN3-215ENST00000565559 OSTCQ9NRP0 149 aa7.28□□□□□ -1.24
CAPN3-215ENST00000565559 NAT8Q9UHE5 227 aa7.28□□□□□ -1.24
CAPN3-215ENST00000565559 IGHV3-73A0A0B4J1V6 119 aa7.27□□□□□ -1.25
CAPN3-215ENST00000565559 A8MWL6 223 aa7.27□□□□□ -1.25
CAPN3-215ENST00000565559 RHOHQ15669 191 aa7.27□□□□□ -1.25
CAPN3-215ENST00000565559 SH2D6Q7Z4S9 175 aa7.27□□□□□ -1.25
CAPN3-215ENST00000565559 SLC25A29Q8N8R3 303 aa7.27□□□□□ -1.25
CAPN3-215ENST00000565559 PRADC1Q9BSG0 188 aa7.27□□□□□ -1.25
CAPN3-215ENST00000565559 SAMD10Q9BYL1 202 aa7.27□□□□□ -1.25
CAPN3-215ENST00000565559 TRAV8-6A0A0B4J262 113 aa7.26□□□□□ -1.25
CAPN3-215ENST00000565559 A0A0U1RQV1 116 aa7.26□□□□□ -1.25
CAPN3-215ENST00000565559 FAM231BA6NCW3 169 aa7.26□□□□□ -1.25
CAPN3-215ENST00000565559 CTRLP40313 264 aa7.26□□□□□ -1.25
CAPN3-215ENST00000565559 FOXA3P55318 350 aaPredicted RBP7.26□□□□□ -1.25
CAPN3-215ENST00000565559 RPL23P62829 140 aaKnown RBP7.26□□□□□ -1.25
CAPN3-215ENST00000565559 LAGE3Q14657 143 aa7.26□□□□□ -1.25
CAPN3-215ENST00000565559 LYZL1Q6UWQ5 148 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms