RNA–Protein interactions for RNA: ENST00000564747.1

GTF3C1-205, Transcript of general transcription factor IIIC subunit 1, humanhuman

Gene GTF3C1, Length 2,798 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-205ENST00000564747 SYNJ2BPP57105 145 aa11.46□□□□□ -0.58
GTF3C1-205ENST00000564747 DUX5Q96PT3 197 aa11.46□□□□□ -0.58
GTF3C1-205ENST00000564747 ZNF580Q9UK33 172 aa11.46□□□□□ -0.58
GTF3C1-205ENST00000564747 K7EQG2 157 aa11.45□□□□□ -0.58
GTF3C1-205ENST00000564747 UBE2D3P61077 147 aa11.45□□□□□ -0.58
GTF3C1-205ENST00000564747 UBE2D2P62837 147 aa11.45□□□□□ -0.58
GTF3C1-205ENST00000564747 IGHV1OR15-1A0A075B7D0 117 aa11.45□□□□□ -0.58
GTF3C1-205ENST00000564747 ODF3Q96PU9 254 aa11.45□□□□□ -0.58
GTF3C1-205ENST00000564747 CDIP1Q9H305 208 aa11.45□□□□□ -0.58
GTF3C1-205ENST00000564747 DOPEY1Q5JWR5 2465 aa11.45□□□□□ -0.58
GTF3C1-205ENST00000564747 NDUFA11Q86Y39 141 aa11.45□□□□□ -0.58
GTF3C1-205ENST00000564747 P0DMU3 169 aa11.44□□□□□ -0.58
GTF3C1-205ENST00000564747 FAM231AP0DMU4 169 aa11.44□□□□□ -0.58
GTF3C1-205ENST00000564747 FAM231CP0DMU5 169 aa11.44□□□□□ -0.58
GTF3C1-205ENST00000564747 MXRA5Q9NR99 2828 aa11.44□□□□□ -0.58
GTF3C1-205ENST00000564747 PTH2Q96A98 100 aa11.44□□□□□ -0.58
GTF3C1-205ENST00000564747 AMELXQ99217 191 aa11.44□□□□□ -0.58
GTF3C1-205ENST00000564747 EPG5Q9HCE0 2579 aa11.43□□□□□ -0.58
GTF3C1-205ENST00000564747 IGHV3-30P01768 117 aa11.43□□□□□ -0.58
GTF3C1-205ENST00000564747 IGHV3-30-5P0DP03 117 aa11.43□□□□□ -0.58
GTF3C1-205ENST00000564747 J3QQQ9 107 aa11.43□□□□□ -0.58
GTF3C1-205ENST00000564747 SPINK8P0C7L1 97 aa11.43□□□□□ -0.58
GTF3C1-205ENST00000564747 SLC25A29Q8N8R3 303 aa11.43□□□□□ -0.58
GTF3C1-205ENST00000564747 MAPK1IP1LQ8NDC0 245 aa11.42□□□□□ -0.58
GTF3C1-205ENST00000564747 CFC1BP0CG36 223 aa11.42□□□□□ -0.58
GTF3C1-205ENST00000564747 CFC1P0CG37 223 aa11.42□□□□□ -0.58
GTF3C1-205ENST00000564747 TRPT1Q86TN4 253 aaKnown RBP11.42□□□□□ -0.58
GTF3C1-205ENST00000564747 TEN1Q86WV5 123 aa11.42□□□□□ -0.58
GTF3C1-205ENST00000564747 PPDPFLQ8WWR9 84 aa11.42□□□□□ -0.58
GTF3C1-205ENST00000564747 CENPEQ02224 2701 aa11.42□□□□□ -0.58
GTF3C1-205ENST00000564747 FHL3Q13643 280 aa11.41□□□□□ -0.58
GTF3C1-205ENST00000564747 NSUN5P1Q3KNT7 163 aa11.41□□□□□ -0.58
GTF3C1-205ENST00000564747 POLQO75417 2590 aa11.41□□□□□ -0.58
GTF3C1-205ENST00000564747 TRBV20-1A0A075B6N2 111 aa11.41□□□□□ -0.58
GTF3C1-205ENST00000564747 TCL1BO95988 128 aa11.41□□□□□ -0.58
GTF3C1-205ENST00000564747 CRYBA4P53673 196 aa11.41□□□□□ -0.58
GTF3C1-205ENST00000564747 GEMIN7Q9H840 131 aaKnown RBP11.41□□□□□ -0.58
GTF3C1-205ENST00000564747 IGHV3-64A0A075B6Q5 118 aa11.4□□□□□ -0.58
GTF3C1-205ENST00000564747 MT-ATP8P03928 68 aa11.4□□□□□ -0.58
GTF3C1-205ENST00000564747 HTN1P15515 57 aa11.4□□□□□ -0.58
GTF3C1-205ENST00000564747 C20orf203Q8NBC4 194 aa11.4□□□□□ -0.58
GTF3C1-205ENST00000564747 IGSF10Q6WRI0 2623 aa11.4□□□□□ -0.58
GTF3C1-205ENST00000564747 LGALS3P17931 250 aaKnown RBP11.4□□□□□ -0.58
GTF3C1-205ENST00000564747 RHOHQ15669 191 aa11.4□□□□□ -0.58
GTF3C1-205ENST00000564747 Q6ZUT4 128 aa11.4□□□□□ -0.58
GTF3C1-205ENST00000564747 CLUHP3Q96NS8 147 aa11.4□□□□□ -0.58
GTF3C1-205ENST00000564747 MYO18BQ8IUG5 2567 aa11.4□□□□□ -0.59
GTF3C1-205ENST00000564747 IGHV3-73A0A0B4J1V6 119 aa11.39□□□□□ -0.59
GTF3C1-205ENST00000564747 GATA3P23771 443 aa11.39□□□□□ -0.59
GTF3C1-205ENST00000564747 C10orf126Q8N4M7 172 aa11.39□□□□□ -0.59
GTF3C1-205ENST00000564747 A8MWV9 139 aa11.39□□□□□ -0.59
GTF3C1-205ENST00000564747 I3L3M4 83 aa11.39□□□□□ -0.59
GTF3C1-205ENST00000564747 TGFAP01135 160 aa11.39□□□□□ -0.59
GTF3C1-205ENST00000564747 RBMY1A1P0DJD3 496 aaKnown RBP11.39□□□□□ -0.59
GTF3C1-205ENST00000564747 RBMY1CP0DJD4 496 aa11.39□□□□□ -0.59
GTF3C1-205ENST00000564747 HOXD3P31249 432 aaPredicted RBP11.39□□□□□ -0.59
GTF3C1-205ENST00000564747 XGP55808 180 aa11.39□□□□□ -0.59
GTF3C1-205ENST00000564747 RBMY1FQ15415 496 aaKnown RBP11.39□□□□□ -0.59
GTF3C1-205ENST00000564747 CARD19Q96LW7 228 aa11.39□□□□□ -0.59
GTF3C1-205ENST00000564747 TMEM223A0PJW6 202 aa11.39□□□□□ -0.59
GTF3C1-205ENST00000564747 SCGB1C2P0DMR2 95 aa11.39□□□□□ -0.59
GTF3C1-205ENST00000564747 A0A0J9YXV3 536 aa11.38□□□□□ -0.59
GTF3C1-205ENST00000564747 PRM2P04554 102 aa11.38□□□□□ -0.59
GTF3C1-205ENST00000564747 TRAV26-1A0A087WT03 109 aa11.38□□□□□ -0.59
GTF3C1-205ENST00000564747 TMEM89A2RUT3 159 aa11.38□□□□□ -0.59
GTF3C1-205ENST00000564747 PROK1P58294 105 aa11.38□□□□□ -0.59
GTF3C1-205ENST00000564747 Q5PR19 223 aa11.38□□□□□ -0.59
GTF3C1-205ENST00000564747 LINC01356Q8N9X3 169 aa11.38□□□□□ -0.59
GTF3C1-205ENST00000564747 VCX2Q9H322 139 aa11.38□□□□□ -0.59
GTF3C1-205ENST00000564747 FBN2P35556 2912 aa11.38□□□□□ -0.59
GTF3C1-205ENST00000564747 KNCNA6PVL3 124 aa11.37□□□□□ -0.59
GTF3C1-205ENST00000564747 ZNF22P17026 224 aaPredicted RBP11.37□□□□□ -0.59
GTF3C1-205ENST00000564747 PRO1854Q9UHT4 67 aa11.37□□□□□ -0.59
GTF3C1-205ENST00000564747 ANKRD17O75179 2603 aaKnown RBP11.37□□□□□ -0.59
GTF3C1-205ENST00000564747 IGLV4-3A0A075B6K6 122 aa11.37□□□□□ -0.59
GTF3C1-205ENST00000564747 RHODO00212 210 aa11.36□□□□□ -0.59
GTF3C1-205ENST00000564747 LEPROTO15243 131 aa11.36□□□□□ -0.59
GTF3C1-205ENST00000564747 SBSPONQ8IVN8 264 aa11.36□□□□□ -0.59
GTF3C1-205ENST00000564747 TRGV11A0A075B6L2 103 aa11.35□□□□□ -0.59
GTF3C1-205ENST00000564747 ANKRD29Q8N6D5 301 aa11.35□□□□□ -0.59
GTF3C1-205ENST00000564747 A4D1N5 150 aa11.35□□□□□ -0.59
GTF3C1-205ENST00000564747 Q9UF83 564 aa11.35□□□□□ -0.59
GTF3C1-205ENST00000564747 USP24Q9UPU5 2620 aa11.35□□□□□ -0.59
GTF3C1-205ENST00000564747 EIF4EBP3O60516 100 aaPredicted RBP11.34□□□□□ -0.59
GTF3C1-205ENST00000564747 DSCR9P59020 149 aa11.34□□□□□ -0.59
GTF3C1-205ENST00000564747 DEFB136Q30KP8 78 aa11.34□□□□□ -0.59
GTF3C1-205ENST00000564747 C18orf65Q6ZTR6 163 aa11.34□□□□□ -0.59
GTF3C1-205ENST00000564747 TRAV2A0A0B4J234 112 aa11.34□□□□□ -0.59
GTF3C1-205ENST00000564747 CEMP1Q6PRD7 247 aaPredicted RBP11.34□□□□□ -0.59
GTF3C1-205ENST00000564747 FAM104AQ969W3 186 aa11.34□□□□□ -0.59
GTF3C1-205ENST00000564747 RAX2Q96IS3 184 aa11.34□□□□□ -0.59
GTF3C1-205ENST00000564747 ZNF702PQ9H963 129 aa11.34□□□□□ -0.59
GTF3C1-205ENST00000564747 VPREB3Q9UKI3 123 aa11.34□□□□□ -0.59
GTF3C1-205ENST00000564747 A0A096LNT2 108 aa11.33□□□□□ -0.59
GTF3C1-205ENST00000564747 ELANEP08246 267 aa11.33□□□□□ -0.59
GTF3C1-205ENST00000564747 DEFB131AP59861 70 aa11.33□□□□□ -0.59
GTF3C1-205ENST00000564747 UBE2E2Q96LR5 201 aa11.33□□□□□ -0.59
GTF3C1-205ENST00000564747 SLURP1P55000 103 aa11.33□□□□□ -0.6
GTF3C1-205ENST00000564747 RNF152Q8N8N0 203 aa11.33□□□□□ -0.6
GTF3C1-205ENST00000564747 SPXQ9BT56 116 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms