RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 BOD1L2Q8IYS8 172 aa5.35□□□□□ -1.55
HERPUD1-209ENST00000564678 HLA-DRB4X5D2U9 266 aa5.35□□□□□ -1.55
HERPUD1-209ENST00000564678 ABCA12Q86UK0 2595 aa5.35□□□□□ -1.55
HERPUD1-209ENST00000564678 CENPEQ02224 2701 aa5.35□□□□□ -1.55
HERPUD1-209ENST00000564678 A0A087WX48 190 aa5.35□□□□□ -1.55
HERPUD1-209ENST00000564678 DNAJC9-AS1A6NH13 148 aa5.35□□□□□ -1.55
HERPUD1-209ENST00000564678 DPM2O94777 84 aa5.35□□□□□ -1.55
HERPUD1-209ENST00000564678 TSPAN13O95857 204 aa5.35□□□□□ -1.55
HERPUD1-209ENST00000564678 MGPP08493 103 aa5.35□□□□□ -1.55
HERPUD1-209ENST00000564678 FGF6P10767 208 aa5.35□□□□□ -1.55
HERPUD1-209ENST00000564678 SPINK13Q1W4C9 94 aa5.35□□□□□ -1.55
HERPUD1-209ENST00000564678 PIK3CD-AS1Q5SR53 167 aa5.35□□□□□ -1.55
HERPUD1-209ENST00000564678 C18orf65Q6ZTR6 163 aa5.35□□□□□ -1.55
HERPUD1-209ENST00000564678 LINC01561Q8N1V8 128 aa5.35□□□□□ -1.55
HERPUD1-209ENST00000564678 PRR26Q8N8Z3 221 aa5.35□□□□□ -1.55
HERPUD1-209ENST00000564678 KLHL30-AS1Q8NEE0 82 aa5.35□□□□□ -1.55
HERPUD1-209ENST00000564678 DLX4Q92988 240 aaPredicted RBP5.35□□□□□ -1.55
HERPUD1-209ENST00000564678 HHLA3Q9XRX5 114 aa5.35□□□□□ -1.55
HERPUD1-209ENST00000564678 APCP25054 2843 aa5.34□□□□□ -1.55
HERPUD1-209ENST00000564678 MXRA5Q9NR99 2828 aa5.34□□□□□ -1.55
HERPUD1-209ENST00000564678 BAHCC1Q9P281 2608 aa5.34□□□□□ -1.55
HERPUD1-209ENST00000564678 SORL1Q92673 2214 aa5.34□□□□□ -1.55
HERPUD1-209ENST00000564678 TRAV12-2A0A075B6T6 113 aa5.34□□□□□ -1.55
HERPUD1-209ENST00000564678 TRBV6-5A0A0K0K1A5 114 aa5.34□□□□□ -1.55
HERPUD1-209ENST00000564678 GAGE12BA1L429 117 aa5.34□□□□□ -1.55
HERPUD1-209ENST00000564678 GAGE12HA6NDE8 117 aa5.34□□□□□ -1.55
HERPUD1-209ENST00000564678 H3BMM0 161 aa5.34□□□□□ -1.55
HERPUD1-209ENST00000564678 IGKV3-20P01619 116 aa5.34□□□□□ -1.55
HERPUD1-209ENST00000564678 POLR2KP53803 58 aaKnown RBP5.34□□□□□ -1.55
HERPUD1-209ENST00000564678 DEFB131AP59861 70 aa5.34□□□□□ -1.55
HERPUD1-209ENST00000564678 DEFB136Q30KP8 78 aa5.34□□□□□ -1.55
HERPUD1-209ENST00000564678 DEFB114Q30KQ6 69 aa5.34□□□□□ -1.55
HERPUD1-209ENST00000564678 MPV17L2Q567V2 206 aa5.34□□□□□ -1.55
HERPUD1-209ENST00000564678 BVES-AS1Q5T3Y7 98 aa5.34□□□□□ -1.55
HERPUD1-209ENST00000564678 RPL39LQ96EH5 51 aaKnown RBP5.34□□□□□ -1.55
HERPUD1-209ENST00000564678 TMEM208Q9BTX3 173 aa5.34□□□□□ -1.55
HERPUD1-209ENST00000564678 AGRNO00468 2067 aa5.34□□□□□ -1.55
HERPUD1-209ENST00000564678 G3V4G9 280 aa5.33□□□□□ -1.56
HERPUD1-209ENST00000564678 DYNLRB2Q8TF09 96 aa5.33□□□□□ -1.56
HERPUD1-209ENST00000564678 ORAOV1Q8WV07 137 aa5.33□□□□□ -1.56
HERPUD1-209ENST00000564678 KIR2DL4Q99706 377 aa5.33□□□□□ -1.56
HERPUD1-209ENST00000564678 CSTL1Q9H114 145 aa5.33□□□□□ -1.56
HERPUD1-209ENST00000564678 C16orf95Q9H693 158 aa5.33□□□□□ -1.56
HERPUD1-209ENST00000564678 MDFICQ9P1T7 246 aa5.33□□□□□ -1.56
HERPUD1-209ENST00000564678 FASNP49327 2511 aaKnown RBP5.33□□□□□ -1.56
HERPUD1-209ENST00000564678 ZNF469Q96JG9 3925 aaPredicted RBP5.33□□□□□ -1.56
HERPUD1-209ENST00000564678 H7C1H1 209 aa5.33□□□□□ -1.56
HERPUD1-209ENST00000564678 PLNP26678 52 aa5.33□□□□□ -1.56
HERPUD1-209ENST00000564678 C2orf91Q6ZV80 131 aa5.33□□□□□ -1.56
HERPUD1-209ENST00000564678 TMEM61Q8N0U2 210 aa5.33□□□□□ -1.56
HERPUD1-209ENST00000564678 PTH2Q96A98 100 aa5.33□□□□□ -1.56
HERPUD1-209ENST00000564678 SCGB3A1Q96QR1 104 aa5.33□□□□□ -1.56
HERPUD1-209ENST00000564678 LINC00467Q9BRT7 94 aa5.33□□□□□ -1.56
HERPUD1-209ENST00000564678 ZNF256Q9Y2P7 627 aaPredicted RBP5.33□□□□□ -1.56
HERPUD1-209ENST00000564678 TRBV27A0A0K0K1C4 114 aa5.32□□□□□ -1.56
HERPUD1-209ENST00000564678 F8VRH5 84 aa5.32□□□□□ -1.56
HERPUD1-209ENST00000564678 CRYGDP07320 174 aa5.32□□□□□ -1.56
HERPUD1-209ENST00000564678 SEC11AP67812 179 aa5.32□□□□□ -1.56
HERPUD1-209ENST00000564678 KRTAP1-1Q07627 177 aa5.32□□□□□ -1.56
HERPUD1-209ENST00000564678 SUMO4Q6EEV6 95 aa5.32□□□□□ -1.56
HERPUD1-209ENST00000564678 C2orf66Q6UXQ4 117 aa5.32□□□□□ -1.56
HERPUD1-209ENST00000564678 JPT2Q9H910 190 aa5.32□□□□□ -1.56
HERPUD1-209ENST00000564678 EDA2RQ9HAV5 297 aa5.32□□□□□ -1.56
HERPUD1-209ENST00000564678 COX11Q9Y6N1 276 aa5.32□□□□□ -1.56
HERPUD1-209ENST00000564678 KNCNA6PVL3 124 aa5.32□□□□□ -1.56
HERPUD1-209ENST00000564678 NHLRC4P0CG21 123 aaPredicted RBP5.32□□□□□ -1.56
HERPUD1-209ENST00000564678 ZNF876PQ49A33 203 aa5.32□□□□□ -1.56
HERPUD1-209ENST00000564678 TMEM97Q5BJF2 176 aa5.32□□□□□ -1.56
HERPUD1-209ENST00000564678 ZC2HC1BQ5TFG8 222 aa5.32□□□□□ -1.56
HERPUD1-209ENST00000564678 TRPT1Q86TN4 253 aaKnown RBP5.32□□□□□ -1.56
HERPUD1-209ENST00000564678 NEXN-AS1Q8NBZ9 246 aa5.32□□□□□ -1.56
HERPUD1-209ENST00000564678 MAP6D1Q9H9H5 199 aa5.32□□□□□ -1.56
HERPUD1-209ENST00000564678 ESM1Q9NQ30 184 aa5.32□□□□□ -1.56
HERPUD1-209ENST00000564678 MRPL35Q9NZE8 188 aaKnown RBP5.32□□□□□ -1.56
HERPUD1-209ENST00000564678 HIGD1BQ9P298 99 aa5.32□□□□□ -1.56
HERPUD1-209ENST00000564678 CYSLTR1Q9Y271 337 aa5.32□□□□□ -1.56
HERPUD1-209ENST00000564678 TSSC4Q9Y5U2 329 aaPredicted RBP5.32□□□□□ -1.56
HERPUD1-209ENST00000564678 SDHAF1A6NFY7 115 aa5.31□□□□□ -1.56
HERPUD1-209ENST00000564678 M0QY20 66 aa5.31□□□□□ -1.56
HERPUD1-209ENST00000564678 NMUP48645 174 aa5.31□□□□□ -1.56
HERPUD1-209ENST00000564678 CMC4P56277 68 aaPredicted RBP5.31□□□□□ -1.56
HERPUD1-209ENST00000564678 HELZ2Q9BYK8 2649 aaKnown RBP5.31□□□□□ -1.56
HERPUD1-209ENST00000564678 RIPPLY3P57055 190 aa5.31□□□□□ -1.56
HERPUD1-209ENST00000564678 HSD52Q0P140 79 aa5.31□□□□□ -1.56
HERPUD1-209ENST00000564678 ZFP2Q6ZN57 461 aa5.31□□□□□ -1.56
HERPUD1-209ENST00000564678 LINC01006Q8NI28 216 aa5.31□□□□□ -1.56
HERPUD1-209ENST00000564678 ZNF418Q8TF45 676 aaPredicted RBP5.31□□□□□ -1.56
HERPUD1-209ENST00000564678 TMEM141Q96I45 108 aa5.31□□□□□ -1.56
HERPUD1-209ENST00000564678 DUX3Q96PT4 197 aa5.31□□□□□ -1.56
HERPUD1-209ENST00000564678 A8MWV9 139 aa5.3□□□□□ -1.56
HERPUD1-209ENST00000564678 RHOHQ15669 191 aa5.3□□□□□ -1.56
HERPUD1-209ENST00000564678 ZNF56Q15929 161 aa5.3□□□□□ -1.56
HERPUD1-209ENST00000564678 FAM74A4Q5TZK3 123 aa5.3□□□□□ -1.56
HERPUD1-209ENST00000564678 PCP2Q8IVA1 136 aa5.3□□□□□ -1.56
HERPUD1-209ENST00000564678 BAALCQ8WXS3 180 aa5.3□□□□□ -1.56
HERPUD1-209ENST00000564678 TIMM17AQ99595 171 aa5.3□□□□□ -1.56
HERPUD1-209ENST00000564678 TP73-AS1Q9UF72 201 aa5.3□□□□□ -1.56
HERPUD1-209ENST00000564678 ITPR3Q14573 2671 aa5.3□□□□□ -1.56
HERPUD1-209ENST00000564678 A6NDN8 102 aa5.29□□□□□ -1.56
HERPUD1-209ENST00000564678 IGIPA6NJ69 53 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms