RNA–Protein interactions for RNA: ENST00000564600.6

CHD9-211, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-211ENST00000564600 NPVFQ9HCQ7 196 aa0.37□□□□□ -2.35
CHD9-211ENST00000564600 ATG2AQ2TAZ0 1938 aa0.36□□□□□ -2.35
CHD9-211ENST00000564600 ZFYVE26Q68DK2 2539 aa0.36□□□□□ -2.35
CHD9-211ENST00000564600 VIRMAQ69YN4 1812 aaKnown RBP0.36□□□□□ -2.35
CHD9-211ENST00000564600 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.36□□□□□ -2.35
CHD9-211ENST00000564600 ANK1P16157 1881 aa0.36□□□□□ -2.35
CHD9-211ENST00000564600 TRAV12-3A0A0B4J271 114 aa0.36□□□□□ -2.35
CHD9-211ENST00000564600 ATP6V1G2-DDX39BF2Z307 99 aa0.36□□□□□ -2.35
CHD9-211ENST00000564600 H3BQ15 152 aa0.36□□□□□ -2.35
CHD9-211ENST00000564600 SPINK8P0C7L1 97 aa0.36□□□□□ -2.35
CHD9-211ENST00000564600 LINC00032P0C843 101 aa0.36□□□□□ -2.35
CHD9-211ENST00000564600 LINC00694P0DN24 101 aa0.36□□□□□ -2.35
CHD9-211ENST00000564600 S100A1P23297 94 aa0.36□□□□□ -2.35
CHD9-211ENST00000564600 GCHFRP30047 84 aa0.36□□□□□ -2.35
CHD9-211ENST00000564600 GNG4P50150 75 aa0.36□□□□□ -2.35
CHD9-211ENST00000564600 BTG2P78543 158 aa0.36□□□□□ -2.35
CHD9-211ENST00000564600 SPAG11BQ08648 103 aa0.36□□□□□ -2.35
CHD9-211ENST00000564600 MEIG1Q5JSS6 88 aa0.36□□□□□ -2.35
CHD9-211ENST00000564600 C10orf128Q5T292 105 aa0.36□□□□□ -2.35
CHD9-211ENST00000564600 C6orf52Q5T4I8 152 aa0.36□□□□□ -2.35
CHD9-211ENST00000564600 MRPL54Q6P161 138 aaKnown RBP0.36□□□□□ -2.35
CHD9-211ENST00000564600 CSAG1Q6PB30 78 aa0.36□□□□□ -2.35
CHD9-211ENST00000564600 SPAG11AQ6PDA7 123 aa0.36□□□□□ -2.35
CHD9-211ENST00000564600 Q6ZUT4 128 aa0.36□□□□□ -2.35
CHD9-211ENST00000564600 COX7B2Q8TF08 81 aa0.36□□□□□ -2.35
CHD9-211ENST00000564600 AMELXQ99217 191 aa0.36□□□□□ -2.35
CHD9-211ENST00000564600 LIMD2Q9BT23 127 aa0.36□□□□□ -2.35
CHD9-211ENST00000564600 LINC00470Q9BZP3 86 aa0.36□□□□□ -2.35
CHD9-211ENST00000564600 AGPAT4-IT1Q9H0P7 198 aa0.36□□□□□ -2.35
CHD9-211ENST00000564600 NDUFA12Q9UI09 145 aa0.36□□□□□ -2.35
CHD9-211ENST00000564600 SPCS1Q9Y6A9 102 aa0.36□□□□□ -2.35
CHD9-211ENST00000564600 SERP1Q9Y6X1 66 aa0.36□□□□□ -2.35
CHD9-211ENST00000564600 KCPQ6ZWJ8 1503 aa0.36□□□□□ -2.35
CHD9-211ENST00000564600 SMG6Q86US8 1419 aaKnown RBP0.36□□□□□ -2.35
CHD9-211ENST00000564600 WDR7Q9Y4E6 1490 aa0.35□□□□□ -2.35
CHD9-211ENST00000564600 KIDINS220Q9ULH0 1771 aa0.35□□□□□ -2.35
CHD9-211ENST00000564600 FAT4Q6V0I7 4981 aa0.35□□□□□ -2.35
CHD9-211ENST00000564600 MYH1P12882 1939 aa0.35□□□□□ -2.35
CHD9-211ENST00000564600 HIVEP1P15822 2718 aa0.35□□□□□ -2.35
CHD9-211ENST00000564600 DOPEY1Q5JWR5 2465 aa0.35□□□□□ -2.35
CHD9-211ENST00000564600 TRAV13-2A0A0B4J235 113 aa0.35□□□□□ -2.35
CHD9-211ENST00000564600 CTXND1A0A1B0GTU2 59 aa0.35□□□□□ -2.35
CHD9-211ENST00000564600 LOC101927531A0A1B0GV80 90 aa0.35□□□□□ -2.35
CHD9-211ENST00000564600 LOC105371267A0A1B0GV96 52 aa0.35□□□□□ -2.35
CHD9-211ENST00000564600 C20orf202A1L168 122 aa0.35□□□□□ -2.35
CHD9-211ENST00000564600 NAP1L6A6NFF2 107 aa0.35□□□□□ -2.35
CHD9-211ENST00000564600 TMEM14DPA8MWL7 114 aa0.35□□□□□ -2.35
CHD9-211ENST00000564600 TMEM262E9PQX1 116 aa0.35□□□□□ -2.35
CHD9-211ENST00000564600 K7EP13 123 aa0.35□□□□□ -2.35
CHD9-211ENST00000564600 SIX6O95475 246 aa0.35□□□□□ -2.35
CHD9-211ENST00000564600 SPINK1P00995 79 aa0.35□□□□□ -2.35
CHD9-211ENST00000564600 TNFP01375 233 aa0.35□□□□□ -2.35
CHD9-211ENST00000564600 COX6CP09669 75 aa0.35□□□□□ -2.35
CHD9-211ENST00000564600 TRAPPC2P0DI81 140 aa0.35□□□□□ -2.35
CHD9-211ENST00000564600 TRAPPC2BP0DI82 140 aa0.35□□□□□ -2.35
CHD9-211ENST00000564600 IFITM1P13164 125 aa0.35□□□□□ -2.35
CHD9-211ENST00000564600 ACYP2P14621 99 aa0.35□□□□□ -2.35
CHD9-211ENST00000564600 S100PP25815 95 aa0.35□□□□□ -2.35
CHD9-211ENST00000564600 NPC2P61916 151 aa0.35□□□□□ -2.35
CHD9-211ENST00000564600 PPP3R1P63098 170 aa0.35□□□□□ -2.35
CHD9-211ENST00000564600 FXYD3Q14802 87 aa0.35□□□□□ -2.35
CHD9-211ENST00000564600 C9orf153Q5TBE3 101 aa0.35□□□□□ -2.35
CHD9-211ENST00000564600 SPINK6Q6UWN8 80 aa0.35□□□□□ -2.35
CHD9-211ENST00000564600 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.35□□□□□ -2.35
CHD9-211ENST00000564600 VMO1Q7Z5L0 202 aa0.35□□□□□ -2.35
CHD9-211ENST00000564600 UBE2DNLQ8IWF7 75 aa0.35□□□□□ -2.35
CHD9-211ENST00000564600 C20orf197Q8N268 126 aa0.35□□□□□ -2.35
CHD9-211ENST00000564600 C5orf56Q8N8D9 126 aa0.35□□□□□ -2.35
CHD9-211ENST00000564600 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.35□□□□□ -2.35
CHD9-211ENST00000564600 SPTSSBQ8NFR3 76 aa0.35□□□□□ -2.35
CHD9-211ENST00000564600 PP6455Q8WZ26 134 aa0.35□□□□□ -2.35
CHD9-211ENST00000564600 IFI27L1Q96BM0 104 aa0.35□□□□□ -2.35
CHD9-211ENST00000564600 DPH3Q96FX2 82 aa0.35□□□□□ -2.35
CHD9-211ENST00000564600 LINC00208Q96KT6 92 aa0.35□□□□□ -2.35
CHD9-211ENST00000564600 C12orf57Q99622 126 aa0.35□□□□□ -2.35
CHD9-211ENST00000564600 MGST2Q99735 147 aa0.35□□□□□ -2.35
CHD9-211ENST00000564600 PROK2Q9HC23 129 aa0.35□□□□□ -2.35
CHD9-211ENST00000564600 IER3IP1Q9Y5U9 82 aa0.35□□□□□ -2.35
CHD9-211ENST00000564600 V9GYH0 126 aa0.35□□□□□ -2.35
CHD9-211ENST00000564600 HECTD1Q9ULT8 2610 aa0.35□□□□□ -2.35
CHD9-211ENST00000564600 ARHGAP31Q2M1Z3 1444 aa0.35□□□□□ -2.35
CHD9-211ENST00000564600 ZNF518AQ6AHZ1 1483 aa0.35□□□□□ -2.35
CHD9-211ENST00000564600 SHANK2Q9UPX8 1470 aa0.35□□□□□ -2.35
CHD9-211ENST00000564600 ANKRD11Q6UB99 2663 aaPredicted RBP0.34□□□□□ -2.35
CHD9-211ENST00000564600 IBTKQ9P2D0 1353 aaPredicted RBP0.34□□□□□ -2.35
CHD9-211ENST00000564600 A0A0D9SG42 100 aa0.34□□□□□ -2.36
CHD9-211ENST00000564600 UBE2L5PA0A1B0GUS4 154 aa0.34□□□□□ -2.36
CHD9-211ENST00000564600 MIF4GDA9UHW6 222 aaKnown RBP0.34□□□□□ -2.36
CHD9-211ENST00000564600 UQCR11O14957 56 aa0.34□□□□□ -2.36
CHD9-211ENST00000564600 NDUFC1O43677 76 aa0.34□□□□□ -2.36
CHD9-211ENST00000564600 GNG7O60262 68 aa0.34□□□□□ -2.36
CHD9-211ENST00000564600 PPP1R17O96001 155 aa0.34□□□□□ -2.36
CHD9-211ENST00000564600 RYR1P21817 5038 aa0.34□□□□□ -2.36
CHD9-211ENST00000564600 CATR1Q13166 79 aa0.34□□□□□ -2.36
CHD9-211ENST00000564600 INSL4Q14641 139 aa0.34□□□□□ -2.36
CHD9-211ENST00000564600 TENM4Q6N022 2769 aa0.34□□□□□ -2.36
CHD9-211ENST00000564600 ALKAL2Q6UX46 152 aa0.34□□□□□ -2.36
CHD9-211ENST00000564600 BAGE2Q86Y30 109 aa0.34□□□□□ -2.36
CHD9-211ENST00000564600 TTC9CQ8N5M4 171 aa0.34□□□□□ -2.36
CHD9-211ENST00000564600 PRO1933Q9H354 126 aa0.34□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms