RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 SYS1-DBNDD2H3BUS1 97 aa11.21□□□□□ -0.61
COMMD4-210ENST00000564587 ATP5LO75964 103 aa11.21□□□□□ -0.61
COMMD4-210ENST00000564587 EGFEM1PQ0D2K5 195 aa11.21□□□□□ -0.61
COMMD4-210ENST00000564587 SPATA12Q7Z6I5 190 aa11.21□□□□□ -0.61
COMMD4-210ENST00000564587 OR4C5Q8NGB2 326 aa11.21□□□□□ -0.61
COMMD4-210ENST00000564587 TRBV27A0A0K0K1C4 114 aa11.2□□□□□ -0.62
COMMD4-210ENST00000564587 SDHAF1A6NFY7 115 aa11.2□□□□□ -0.62
COMMD4-210ENST00000564587 IGHV3-53P01767 116 aa11.2□□□□□ -0.62
COMMD4-210ENST00000564587 TEX43Q6ZNM6 134 aa11.2□□□□□ -0.62
COMMD4-210ENST00000564587 NOTCH3Q9UM47 2321 aa11.2□□□□□ -0.62
COMMD4-210ENST00000564587 A8MZ25 164 aa11.19□□□□□ -0.62
COMMD4-210ENST00000564587 NUDT3O95989 172 aa11.19□□□□□ -0.62
COMMD4-210ENST00000564587 NOP10Q9NPE3 64 aaKnown RBP11.19□□□□□ -0.62
COMMD4-210ENST00000564587 PLAC8L1A1L4L8 177 aa11.18□□□□□ -0.62
COMMD4-210ENST00000564587 Q8N976 141 aa11.18□□□□□ -0.62
COMMD4-210ENST00000564587 IFI27L1Q96BM0 104 aa11.18□□□□□ -0.62
COMMD4-210ENST00000564587 TNFRSF18Q9Y5U5 241 aa11.18□□□□□ -0.62
COMMD4-210ENST00000564587 I3L3M4 83 aa11.17□□□□□ -0.62
COMMD4-210ENST00000564587 PKIAP61925 76 aa11.17□□□□□ -0.62
COMMD4-210ENST00000564587 RHOHQ15669 191 aa11.17□□□□□ -0.62
COMMD4-210ENST00000564587 OXLD1Q5BKU9 147 aa11.17□□□□□ -0.62
COMMD4-210ENST00000564587 Q6ZTI0 123 aa11.17□□□□□ -0.62
COMMD4-210ENST00000564587 TRBV10-1A0A0K0K1A3 114 aa11.16□□□□□ -0.62
COMMD4-210ENST00000564587 TSTD3H0UI37 97 aa11.16□□□□□ -0.62
COMMD4-210ENST00000564587 IGHV4-30-4P0DP06 118 aa11.16□□□□□ -0.62
COMMD4-210ENST00000564587 CDPF1Q6NVV7 123 aa11.16□□□□□ -0.62
COMMD4-210ENST00000564587 LINC00173Q6ZV60 143 aa11.16□□□□□ -0.62
COMMD4-210ENST00000564587 TOMM6Q96B49 74 aa11.16□□□□□ -0.62
COMMD4-210ENST00000564587 C18orf15Q96N68 181 aa11.16□□□□□ -0.62
COMMD4-210ENST00000564587 VAMP8Q9BV40 100 aa11.16□□□□□ -0.62
COMMD4-210ENST00000564587 X6R8D5 127 aa11.16□□□□□ -0.62
COMMD4-210ENST00000564587 TRGV2A0A075B6R0 118 aa11.15□□□□□ -0.62
COMMD4-210ENST00000564587 IGHV3-73A0A0B4J1V6 119 aa11.15□□□□□ -0.62
COMMD4-210ENST00000564587 LINC01545Q5VT33 79 aa11.15□□□□□ -0.62
COMMD4-210ENST00000564587 LGALS9CQ6DKI2 356 aa11.15□□□□□ -0.62
COMMD4-210ENST00000564587 CYSLTR1Q9Y271 337 aa11.15□□□□□ -0.62
COMMD4-210ENST00000564587 NACAE9PAV3 2078 aa11.15□□□□□ -0.63
COMMD4-210ENST00000564587 LYRM9A8MSI8 78 aa11.14□□□□□ -0.63
COMMD4-210ENST00000564587 MIFP14174 115 aa11.14□□□□□ -0.63
COMMD4-210ENST00000564587 ANK2Q01484 3957 aa11.14□□□□□ -0.63
COMMD4-210ENST00000564587 GAGE12BA1L429 117 aa11.13□□□□□ -0.63
COMMD4-210ENST00000564587 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.13□□□□□ -0.63
COMMD4-210ENST00000564587 GAGE7O76087 117 aa11.13□□□□□ -0.63
COMMD4-210ENST00000564587 GAGE12FP0CL80 117 aa11.13□□□□□ -0.63
COMMD4-210ENST00000564587 GAGE12GP0CL81 117 aa11.13□□□□□ -0.63
COMMD4-210ENST00000564587 GAGE12IP0CL82 117 aa11.13□□□□□ -0.63
COMMD4-210ENST00000564587 C2orf66Q6UXQ4 117 aa11.13□□□□□ -0.63
COMMD4-210ENST00000564587 LINC00612Q8N6U2 182 aa11.13□□□□□ -0.63
COMMD4-210ENST00000564587 RNF183Q96D59 192 aa11.13□□□□□ -0.63
COMMD4-210ENST00000564587 TENM1Q9UKZ4 2725 aa11.13□□□□□ -0.63
COMMD4-210ENST00000564587 K7EQD1 137 aa11.12□□□□□ -0.63
COMMD4-210ENST00000564587 KRTAP10-11P60412 298 aa11.12□□□□□ -0.63
COMMD4-210ENST00000564587 DEFB135Q30KP9 77 aa11.12□□□□□ -0.63
COMMD4-210ENST00000564587 ERASQ7Z444 233 aa11.12□□□□□ -0.63
COMMD4-210ENST00000564587 ZNF664Q8N3J9 261 aa11.12□□□□□ -0.63
COMMD4-210ENST00000564587 NEXN-AS1Q8NBZ9 246 aa11.12□□□□□ -0.63
COMMD4-210ENST00000564587 OR11H2Q8NH07 326 aa11.12□□□□□ -0.63
COMMD4-210ENST00000564587 ZNF479Q96JC4 524 aa11.12□□□□□ -0.63
COMMD4-210ENST00000564587 SCGB3A1Q96QR1 104 aa11.12□□□□□ -0.63
COMMD4-210ENST00000564587 TRAV9-2A0A087WT02 112 aa11.11□□□□□ -0.63
COMMD4-210ENST00000564587 TRBV6-4A0A1B0GX49 114 aa11.11□□□□□ -0.63
COMMD4-210ENST00000564587 PCP4L1A6NKN8 68 aa11.11□□□□□ -0.63
COMMD4-210ENST00000564587 HSBP1L1C9JCN9 74 aa11.11□□□□□ -0.63
COMMD4-210ENST00000564587 PRSS1P07477 247 aa11.11□□□□□ -0.63
COMMD4-210ENST00000564587 RPL36AP83881 106 aaKnown RBP11.11□□□□□ -0.63
COMMD4-210ENST00000564587 Q6ZN92 141 aa11.11□□□□□ -0.63
COMMD4-210ENST00000564587 Q6ZSN1 163 aa11.11□□□□□ -0.63
COMMD4-210ENST00000564587 RPL36ALQ969Q0 106 aaKnown RBP11.11□□□□□ -0.63
COMMD4-210ENST00000564587 TMEM141Q96I45 108 aa11.11□□□□□ -0.63
COMMD4-210ENST00000564587 TP53TG1Q9Y2A0 90 aa11.11□□□□□ -0.63
COMMD4-210ENST00000564587 SAMD5Q5TGI4 173 aa11.1□□□□□ -0.63
COMMD4-210ENST00000564587 NEGR1Q7Z3B1 354 aa11.1□□□□□ -0.63
COMMD4-210ENST00000564587 TRBV7-3A0A075B6L6 115 aa11.09□□□□□ -0.63
COMMD4-210ENST00000564587 TRAV12-1A0A0B4J245 112 aa11.09□□□□□ -0.63
COMMD4-210ENST00000564587 TRGV4A0A0C4DH28 118 aa11.09□□□□□ -0.63
COMMD4-210ENST00000564587 TEX48A0A1B0GUV7 120 aa11.09□□□□□ -0.63
COMMD4-210ENST00000564587 H0Y8G0 127 aa11.09□□□□□ -0.63
COMMD4-210ENST00000564587 TSHBP01222 138 aa11.09□□□□□ -0.63
COMMD4-210ENST00000564587 EMP1P54849 157 aa11.09□□□□□ -0.63
COMMD4-210ENST00000564587 TIMM17AQ99595 171 aa11.09□□□□□ -0.63
COMMD4-210ENST00000564587 ZMAT4Q9H898 229 aa11.09□□□□□ -0.63
COMMD4-210ENST00000564587 P0DMU3 169 aa11.08□□□□□ -0.64
COMMD4-210ENST00000564587 FAM231AP0DMU4 169 aa11.08□□□□□ -0.64
COMMD4-210ENST00000564587 FAM231CP0DMU5 169 aa11.08□□□□□ -0.64
COMMD4-210ENST00000564587 DAZ4Q86SG3 579 aaKnown RBP11.08□□□□□ -0.64
COMMD4-210ENST00000564587 PRADC1Q9BSG0 188 aa11.08□□□□□ -0.64
COMMD4-210ENST00000564587 DAZ3Q9NR90 486 aaKnown RBP11.08□□□□□ -0.64
COMMD4-210ENST00000564587 PAM16Q9Y3D7 125 aa11.08□□□□□ -0.64
COMMD4-210ENST00000564587 NPSP0C0P6 89 aa11.07□□□□□ -0.64
COMMD4-210ENST00000564587 COTL1Q14019 142 aa11.07□□□□□ -0.64
COMMD4-210ENST00000564587 SPATA45Q537H7 98 aa11.07□□□□□ -0.64
COMMD4-210ENST00000564587 SLC25A29Q8N8R3 303 aa11.07□□□□□ -0.64
COMMD4-210ENST00000564587 C20orf203Q8NBC4 194 aa11.07□□□□□ -0.64
COMMD4-210ENST00000564587 A0A087WX48 190 aa11.06□□□□□ -0.64
COMMD4-210ENST00000564587 IGHV4-28A0A0C4DH34 117 aa11.06□□□□□ -0.64
COMMD4-210ENST00000564587 PAPPA-AS1Q5QFB9 102 aa11.06□□□□□ -0.64
COMMD4-210ENST00000564587 ZNRF2Q8NHG8 242 aa11.06□□□□□ -0.64
COMMD4-210ENST00000564587 PRO1933Q9H354 126 aa11.06□□□□□ -0.64
COMMD4-210ENST00000564587 IGIPA6NJ69 53 aa11.05□□□□□ -0.64
COMMD4-210ENST00000564587 G3V4G9 280 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms