RNA–Protein interactions for RNA: ENST00000564503.5

CAPN3-212, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-212ENST00000564503 POLEQ07864 2286 aa3.53□□□□□ -1.85
CAPN3-212ENST00000564503 IGHV3-35A0A0C4DH35 117 aa3.52□□□□□ -1.85
CAPN3-212ENST00000564503 IGHV3-66A0A0C4DH42 116 aa3.52□□□□□ -1.85
CAPN3-212ENST00000564503 IGIPA6NJ69 53 aa3.52□□□□□ -1.85
CAPN3-212ENST00000564503 C9JAW5 83 aa3.52□□□□□ -1.85
CAPN3-212ENST00000564503 J3QQQ9 107 aa3.52□□□□□ -1.85
CAPN3-212ENST00000564503 RS1O15537 224 aa3.52□□□□□ -1.85
CAPN3-212ENST00000564503 DUSP14O95147 198 aaKnown RBP3.52□□□□□ -1.85
CAPN3-212ENST00000564503 NDUFA7O95182 113 aa3.52□□□□□ -1.85
CAPN3-212ENST00000564503 IGHV1-69P01742 117 aa3.52□□□□□ -1.85
CAPN3-212ENST00000564503 IGHV3-33P01772 117 aa3.52□□□□□ -1.85
CAPN3-212ENST00000564503 POLR2KP53803 58 aaKnown RBP3.52□□□□□ -1.85
CAPN3-212ENST00000564503 HERV-K104P63124 156 aa3.52□□□□□ -1.85
CAPN3-212ENST00000564503 GAGE2BQ13066 116 aa3.52□□□□□ -1.85
CAPN3-212ENST00000564503 ATXN8Q156A1 80 aa3.52□□□□□ -1.85
CAPN3-212ENST00000564503 MRPL23Q16540 153 aaKnown RBP3.52□□□□□ -1.85
CAPN3-212ENST00000564503 ANXA2RQ3ZCQ2 193 aa3.52□□□□□ -1.85
CAPN3-212ENST00000564503 ZNF876PQ49A33 203 aa3.52□□□□□ -1.85
CAPN3-212ENST00000564503 GAGE2EQ4V326 116 aa3.52□□□□□ -1.85
CAPN3-212ENST00000564503 TTC32Q5I0X7 151 aa3.52□□□□□ -1.85
CAPN3-212ENST00000564503 SFTA2Q6UW10 78 aa3.52□□□□□ -1.85
CAPN3-212ENST00000564503 GPHB5Q86YW7 130 aa3.52□□□□□ -1.85
CAPN3-212ENST00000564503 APRG1Q8IVJ8 170 aa3.52□□□□□ -1.85
CAPN3-212ENST00000564503 ZFAND2AQ8N6M9 145 aa3.52□□□□□ -1.85
CAPN3-212ENST00000564503 KLHL30-AS1Q8NEE0 82 aa3.52□□□□□ -1.85
CAPN3-212ENST00000564503 TMEM263Q8WUH6 116 aaKnown RBP3.52□□□□□ -1.85
CAPN3-212ENST00000564503 FAM19A4Q96LR4 140 aa3.52□□□□□ -1.85
CAPN3-212ENST00000564503 GAGE2DQ9UEU5 116 aa3.52□□□□□ -1.85
CAPN3-212ENST00000564503 SS18L2Q9UHA2 77 aa3.52□□□□□ -1.85
CAPN3-212ENST00000564503 TP53TG1Q9Y2A0 90 aa3.52□□□□□ -1.85
CAPN3-212ENST00000564503 CSDC2Q9Y534 153 aaKnown RBP3.52□□□□□ -1.85
CAPN3-212ENST00000564503 RIF1Q5UIP0 2472 aaKnown RBP3.52□□□□□ -1.85
CAPN3-212ENST00000564503 FRYLO94915 3013 aa3.52□□□□□ -1.85
CAPN3-212ENST00000564503 TRAV8-4A0A0B4J246 113 aa3.51□□□□□ -1.85
CAPN3-212ENST00000564503 A0A0J9YX75 114 aa3.51□□□□□ -1.85
CAPN3-212ENST00000564503 TRBV6-5A0A0K0K1A5 114 aa3.51□□□□□ -1.85
CAPN3-212ENST00000564503 TRBV10-2A0A0K0K1G8 114 aa3.51□□□□□ -1.85
CAPN3-212ENST00000564503 SDHAF1A6NFY7 115 aa3.51□□□□□ -1.85
CAPN3-212ENST00000564503 FAM223BA6NKX1 122 aa3.51□□□□□ -1.85
CAPN3-212ENST00000564503 ATP6V0E1O15342 81 aa3.51□□□□□ -1.85
CAPN3-212ENST00000564503 TSHBP01222 138 aa3.51□□□□□ -1.85
CAPN3-212ENST00000564503 RNASE3P12724 160 aaKnown RBP3.51□□□□□ -1.85
CAPN3-212ENST00000564503 RPL13AP40429 203 aaKnown RBP3.51□□□□□ -1.85
CAPN3-212ENST00000564503 TSPEAR-AS2P59090 65 aa3.51□□□□□ -1.85
CAPN3-212ENST00000564503 RHOHQ15669 191 aa3.51□□□□□ -1.85
CAPN3-212ENST00000564503 LINC01620Q4KN68 170 aa3.51□□□□□ -1.85
CAPN3-212ENST00000564503 C5orf47Q569G3 176 aa3.51□□□□□ -1.85
CAPN3-212ENST00000564503 TMEM170BQ5T4T1 132 aa3.51□□□□□ -1.85
CAPN3-212ENST00000564503 GAGE2AQ6NT46 116 aa3.51□□□□□ -1.85
CAPN3-212ENST00000564503 Q6ZQT7 251 aa3.51□□□□□ -1.85
CAPN3-212ENST00000564503 FAM223AQ8IWN6 122 aa3.51□□□□□ -1.85
CAPN3-212ENST00000564503 KIR2DL4Q99706 377 aa3.51□□□□□ -1.85
CAPN3-212ENST00000564503 KIF25-AS1Q9Y6Z4 181 aa3.51□□□□□ -1.85
CAPN3-212ENST00000564503 FREM2Q5SZK8 3169 aa3.5□□□□□ -1.85
CAPN3-212ENST00000564503 IGKV2D-30A0A075B6S6 120 aa3.5□□□□□ -1.85
CAPN3-212ENST00000564503 IGHV3OR16-13A0A075B7E8 117 aa3.5□□□□□ -1.85
CAPN3-212ENST00000564503 IGHV3-49A0A0A0MS15 119 aa3.5□□□□□ -1.85
CAPN3-212ENST00000564503 IGHV3-74A0A0B4J1X5 117 aa3.5□□□□□ -1.85
CAPN3-212ENST00000564503 TRAV2A0A0B4J234 112 aa3.5□□□□□ -1.85
CAPN3-212ENST00000564503 TRBV30A0A0K0K1B3 111 aa3.5□□□□□ -1.85
CAPN3-212ENST00000564503 TMEM223A0PJW6 202 aa3.5□□□□□ -1.85
CAPN3-212ENST00000564503 GAGE12JA6NER3 117 aa3.5□□□□□ -1.85
CAPN3-212ENST00000564503 H3BMM0 161 aa3.5□□□□□ -1.85
CAPN3-212ENST00000564503 H3BT86 120 aa3.5□□□□□ -1.85
CAPN3-212ENST00000564503 M0R2P5 195 aa3.5□□□□□ -1.85
CAPN3-212ENST00000564503 LGALS9O00182 355 aa3.5□□□□□ -1.85
CAPN3-212ENST00000564503 NDUFA4O00483 81 aa3.5□□□□□ -1.85
CAPN3-212ENST00000564503 SOCS3O14543 225 aa3.5□□□□□ -1.85
CAPN3-212ENST00000564503 GAGE7O76087 117 aa3.5□□□□□ -1.85
CAPN3-212ENST00000564503 GAGE12FP0CL80 117 aa3.5□□□□□ -1.85
CAPN3-212ENST00000564503 GAGE12GP0CL81 117 aa3.5□□□□□ -1.85
CAPN3-212ENST00000564503 GAGE12IP0CL82 117 aa3.5□□□□□ -1.85
CAPN3-212ENST00000564503 IFITM1P13164 125 aa3.5□□□□□ -1.85
CAPN3-212ENST00000564503 RNASE4P34096 147 aaKnown RBP3.5□□□□□ -1.85
CAPN3-212ENST00000564503 CRIP2P52943 208 aaPredicted RBP3.5□□□□□ -1.85
CAPN3-212ENST00000564503 NDUFV3P56181 108 aaKnown RBP3.5□□□□□ -1.85
CAPN3-212ENST00000564503 LINC00315P59091 139 aa3.5□□□□□ -1.85
CAPN3-212ENST00000564503 GAGE4Q13068 117 aa3.5□□□□□ -1.85
CAPN3-212ENST00000564503 Q1RN00 199 aa3.5□□□□□ -1.85
CAPN3-212ENST00000564503 NSUN5P1Q3KNT7 163 aa3.5□□□□□ -1.85
CAPN3-212ENST00000564503 TRPT1Q86TN4 253 aaKnown RBP3.5□□□□□ -1.85
CAPN3-212ENST00000564503 UBE2WQ96B02 151 aa3.5□□□□□ -1.85
CAPN3-212ENST00000564503 AMELXQ99217 191 aa3.5□□□□□ -1.85
CAPN3-212ENST00000564503 MDFICQ9P1T7 246 aa3.5□□□□□ -1.85
CAPN3-212ENST00000564503 ZNF462Q96JM2 2506 aa3.5□□□□□ -1.85
CAPN3-212ENST00000564503 FRYQ5TBA9 3013 aa3.5□□□□□ -1.85
CAPN3-212ENST00000564503 DMXL1Q9Y485 3027 aa3.5□□□□□ -1.85
CAPN3-212ENST00000564503 ZFYVE26Q68DK2 2539 aa3.49□□□□□ -1.85
CAPN3-212ENST00000564503 TRAV4A0A0B4J268 109 aa3.49□□□□□ -1.85
CAPN3-212ENST00000564503 TRBV27A0A0K0K1C4 114 aa3.49□□□□□ -1.85
CAPN3-212ENST00000564503 CYSRT1A8MQ03 144 aa3.49□□□□□ -1.85
CAPN3-212ENST00000564503 G3V318 75 aa3.49□□□□□ -1.85
CAPN3-212ENST00000564503 GNRH2O43555 120 aa3.49□□□□□ -1.85
CAPN3-212ENST00000564503 IGF1P05019 195 aa3.49□□□□□ -1.85
CAPN3-212ENST00000564503 UBE2E1P51965 193 aa3.49□□□□□ -1.85
CAPN3-212ENST00000564503 EMP1P54849 157 aa3.49□□□□□ -1.85
CAPN3-212ENST00000564503 UCNP55089 124 aa3.49□□□□□ -1.85
CAPN3-212ENST00000564503 RPL39P62891 51 aaKnown RBP3.49□□□□□ -1.85
CAPN3-212ENST00000564503 FBXL19-AS1Q494R0 122 aa3.49□□□□□ -1.85
CAPN3-212ENST00000564503 PRR30Q53SZ7 412 aaPredicted RBP3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms