RNA–Protein interactions for RNA: ENST00000564399.1

VPS4A-203, Transcript of vacuolar protein sorting 4 homolog A, humanhuman

TSL 5

Gene VPS4A, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4A-203ENST00000564399 CDC34P49427 236 aaPredicted RBP4.55□□□□□ -1.68
VPS4A-203ENST00000564399 RAB4BP61018 213 aa4.55□□□□□ -1.68
VPS4A-203ENST00000564399 DNLZQ5SXM8 178 aa4.55□□□□□ -1.68
VPS4A-203ENST00000564399 DERL1Q9BUN8 251 aa4.55□□□□□ -1.68
VPS4A-203ENST00000564399 RBM38Q9H0Z9 239 aaKnown RBP4.55□□□□□ -1.68
VPS4A-203ENST00000564399 TRBV6-1A0A0K0K1D8 114 aa4.54□□□□□ -1.68
VPS4A-203ENST00000564399 SH2D1AO60880 128 aa4.54□□□□□ -1.68
VPS4A-203ENST00000564399 STAG3L2P0CL84 134 aa4.54□□□□□ -1.68
VPS4A-203ENST00000564399 STAG3L3P0CL85 134 aa4.54□□□□□ -1.68
VPS4A-203ENST00000564399 CYCSP99999 105 aaKnown RBP4.54□□□□□ -1.68
VPS4A-203ENST00000564399 SRSF9Q13242 221 aaKnown RBP eCLIP4.54□□□□□ -1.68
VPS4A-203ENST00000564399 HIGD2BQ4VC39 106 aa4.54□□□□□ -1.68
VPS4A-203ENST00000564399 PRR27Q6MZM9 219 aa4.54□□□□□ -1.68
VPS4A-203ENST00000564399 CFAP161Q6P656 301 aa4.54□□□□□ -1.68
VPS4A-203ENST00000564399 Q6ZRP5 223 aa4.54□□□□□ -1.68
VPS4A-203ENST00000564399 VAX2Q9UIW0 290 aa4.54□□□□□ -1.68
VPS4A-203ENST00000564399 A0A096LNI7 61 aa4.53□□□□□ -1.68
VPS4A-203ENST00000564399 TRAV26-2A0A0B4J265 109 aa4.53□□□□□ -1.68
VPS4A-203ENST00000564399 IGHV1-24A0A0C4DH33 117 aa4.53□□□□□ -1.68
VPS4A-203ENST00000564399 FAM240BA0A1B0GVZ2 78 aa4.53□□□□□ -1.68
VPS4A-203ENST00000564399 A6NHS1 94 aa4.53□□□□□ -1.68
VPS4A-203ENST00000564399 RPL12P30050 165 aaKnown RBP4.53□□□□□ -1.68
VPS4A-203ENST00000564399 SULT1A2P50226 295 aa4.53□□□□□ -1.68
VPS4A-203ENST00000564399 CRIP1P50238 77 aa4.53□□□□□ -1.68
VPS4A-203ENST00000564399 FAM162BQ5T6X4 162 aa4.53□□□□□ -1.68
VPS4A-203ENST00000564399 Q86TA4 180 aa4.53□□□□□ -1.68
VPS4A-203ENST00000564399 C20orf203Q8NBC4 194 aa4.53□□□□□ -1.68
VPS4A-203ENST00000564399 RAB24Q969Q5 203 aa4.53□□□□□ -1.68
VPS4A-203ENST00000564399 WFDC1Q9HC57 220 aa4.53□□□□□ -1.68
VPS4A-203ENST00000564399 TMEM167BQ9NRX6 74 aa4.53□□□□□ -1.68
VPS4A-203ENST00000564399 GAGE12HA6NDE8 117 aa4.52□□□□□ -1.69
VPS4A-203ENST00000564399 CXorf1O96002 111 aa4.52□□□□□ -1.69
VPS4A-203ENST00000564399 GHRHP01286 108 aa4.52□□□□□ -1.69
VPS4A-203ENST00000564399 DEFA3P59666 94 aa4.52□□□□□ -1.69
VPS4A-203ENST00000564399 IQCJQ1A5X6 159 aa4.52□□□□□ -1.69
VPS4A-203ENST00000564399 C15orf56Q8N910 161 aa4.52□□□□□ -1.69
VPS4A-203ENST00000564399 SUN5Q8TC36 379 aa4.52□□□□□ -1.69
VPS4A-203ENST00000564399 PPP1R1CQ8WVI7 109 aa4.52□□□□□ -1.69
VPS4A-203ENST00000564399 ZNF471Q9BX82 626 aaPredicted RBP4.52□□□□□ -1.69
VPS4A-203ENST00000564399 GFRA4Q9GZZ7 299 aa4.52□□□□□ -1.69
VPS4A-203ENST00000564399 LINC00474Q9P2X8 69 aa4.52□□□□□ -1.69
VPS4A-203ENST00000564399 FSIP2Q5CZC0 6907 aa4.52□□□□□ -1.69
VPS4A-203ENST00000564399 IGLV4-60A0A075B6I1 120 aa4.51□□□□□ -1.69
VPS4A-203ENST00000564399 IGKV3OR2-268A0A0C4DH90 116 aa4.51□□□□□ -1.69
VPS4A-203ENST00000564399 MUC21A0A140T8X8 626 aa4.51□□□□□ -1.69
VPS4A-203ENST00000564399 A0A1W2PRE2 83 aa4.51□□□□□ -1.69
VPS4A-203ENST00000564399 PEX7O00628 323 aa4.51□□□□□ -1.69
VPS4A-203ENST00000564399 MPC2O95563 127 aa4.51□□□□□ -1.69
VPS4A-203ENST00000564399 PET100P0DJ07 73 aa4.51□□□□□ -1.69
VPS4A-203ENST00000564399 SMIM17P0DL12 118 aa4.51□□□□□ -1.69
VPS4A-203ENST00000564399 UBE2G2P60604 165 aa4.51□□□□□ -1.69
VPS4A-203ENST00000564399 SSTP61278 116 aa4.51□□□□□ -1.69
VPS4A-203ENST00000564399 CACNG7P62955 275 aa4.51□□□□□ -1.69
VPS4A-203ENST00000564399 PRR4Q16378 134 aa4.51□□□□□ -1.69
VPS4A-203ENST00000564399 ZNF664Q8N3J9 261 aa4.51□□□□□ -1.69
VPS4A-203ENST00000564399 OR10AG1Q8NH19 301 aa4.51□□□□□ -1.69
VPS4A-203ENST00000564399 AQP10Q96PS8 301 aa4.51□□□□□ -1.69
VPS4A-203ENST00000564399 TMEM243Q9BU79 118 aa4.51□□□□□ -1.69
VPS4A-203ENST00000564399 PSORS1C2Q9UIG4 136 aa4.51□□□□□ -1.69
VPS4A-203ENST00000564399 ZFP30Q9Y2G7 519 aa4.51□□□□□ -1.69
VPS4A-203ENST00000564399 A0A1B0GUV1 79 aa4.5□□□□□ -1.69
VPS4A-203ENST00000564399 UBE2L6O14933 153 aa4.5□□□□□ -1.69
VPS4A-203ENST00000564399 UBE2G1P62253 170 aa4.5□□□□□ -1.69
VPS4A-203ENST00000564399 ZNF674Q2M3X9 581 aa4.5□□□□□ -1.69
VPS4A-203ENST00000564399 SPANXN1Q5VSR9 72 aa4.5□□□□□ -1.69
VPS4A-203ENST00000564399 MZT2BQ6NZ67 158 aa4.5□□□□□ -1.69
VPS4A-203ENST00000564399 ACTR3CQ9C0K3 210 aaPredicted RBP4.5□□□□□ -1.69
VPS4A-203ENST00000564399 PKIGQ9Y2B9 76 aa4.5□□□□□ -1.69
VPS4A-203ENST00000564399 MBP02144 154 aa4.49□□□□□ -1.69
VPS4A-203ENST00000564399 H2BFSP57053 126 aa4.49□□□□□ -1.69
VPS4A-203ENST00000564399 COX8CQ7Z4L0 72 aa4.49□□□□□ -1.69
VPS4A-203ENST00000564399 PRR26Q8N8Z3 221 aa4.49□□□□□ -1.69
VPS4A-203ENST00000564399 HIST1H2BAQ96A08 127 aa4.49□□□□□ -1.69
VPS4A-203ENST00000564399 GVQW2A0A096LPI5 108 aaPredicted RBP4.48□□□□□ -1.69
VPS4A-203ENST00000564399 MT-ND6P03923 174 aa4.48□□□□□ -1.69
VPS4A-203ENST00000564399 MGPP08493 103 aa4.48□□□□□ -1.69
VPS4A-203ENST00000564399 ATP6V0CP27449 155 aa4.48□□□□□ -1.69
VPS4A-203ENST00000564399 INO80EQ8NBZ0 244 aaPredicted RBP4.48□□□□□ -1.69
VPS4A-203ENST00000564399 CHCHD10Q8WYQ3 142 aaPredicted RBP4.48□□□□□ -1.69
VPS4A-203ENST00000564399 FMC1Q96HJ9 113 aa4.48□□□□□ -1.69
VPS4A-203ENST00000564399 PSMG3Q9BT73 122 aaPredicted RBP4.48□□□□□ -1.69
VPS4A-203ENST00000564399 NKX6-2Q9C056 277 aaPredicted RBP4.48□□□□□ -1.69
VPS4A-203ENST00000564399 FAM74A7A6NL05 159 aa4.47□□□□□ -1.69
VPS4A-203ENST00000564399 SSNA1O43805 119 aa4.47□□□□□ -1.69
VPS4A-203ENST00000564399 AMTP48728 403 aa4.47□□□□□ -1.69
VPS4A-203ENST00000564399 NKX2-5P52952 324 aaPredicted RBP4.47□□□□□ -1.69
VPS4A-203ENST00000564399 SERF2P84101 59 aa4.47□□□□□ -1.69
VPS4A-203ENST00000564399 ENKURQ8TC29 256 aa4.47□□□□□ -1.69
VPS4A-203ENST00000564399 LINC00526Q96FQ7 95 aa4.47□□□□□ -1.69
VPS4A-203ENST00000564399 CARD19Q96LW7 228 aa4.47□□□□□ -1.69
VPS4A-203ENST00000564399 AP1S3Q96PC3 154 aa4.47□□□□□ -1.69
VPS4A-203ENST00000564399 TNFSF18Q9UNG2 199 aa4.47□□□□□ -1.69
VPS4A-203ENST00000564399 M0QY20 66 aa4.46□□□□□ -1.7
VPS4A-203ENST00000564399 SNAI2O43623 268 aa4.46□□□□□ -1.7
VPS4A-203ENST00000564399 LTAP01374 205 aa4.46□□□□□ -1.7
VPS4A-203ENST00000564399 CXCL1P09341 107 aa4.46□□□□□ -1.7
VPS4A-203ENST00000564399 OR5AL1P0C617 328 aa4.46□□□□□ -1.7
VPS4A-203ENST00000564399 AKR1C3P42330 323 aa4.46□□□□□ -1.7
VPS4A-203ENST00000564399 GAGE2BQ13066 116 aa4.46□□□□□ -1.7
VPS4A-203ENST00000564399 COTL1Q14019 142 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms