RNA–Protein interactions for RNA: ENST00000564333.1

CCNF-204, Transcript of cyclin F, humanhuman

Gene CCNF, Length 1,937 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-204ENST00000564333 HIST2H2BDQ6DRA6 164 aa12.22□□□□□ -0.45
CCNF-204ENST00000564333 ZNF469Q96JG9 3925 aaPredicted RBP12.21□□□□□ -0.45
CCNF-204ENST00000564333 TRGV11A0A075B6L2 103 aa12.21□□□□□ -0.46
CCNF-204ENST00000564333 TRBV7-3A0A075B6L6 115 aa12.21□□□□□ -0.46
CCNF-204ENST00000564333 A8MTW9 85 aa12.21□□□□□ -0.46
CCNF-204ENST00000564333 K7ERJ3 54 aa12.21□□□□□ -0.46
CCNF-204ENST00000564333 KRTAP1-1Q07627 177 aa12.21□□□□□ -0.46
CCNF-204ENST00000564333 C2orf66Q6UXQ4 117 aa12.21□□□□□ -0.46
CCNF-204ENST00000564333 ESM1Q9NQ30 184 aa12.21□□□□□ -0.46
CCNF-204ENST00000564333 ITPR3Q14573 2671 aa12.2□□□□□ -0.46
CCNF-204ENST00000564333 F5H697 171 aa12.2□□□□□ -0.46
CCNF-204ENST00000564333 RBMY1A1P0DJD3 496 aaKnown RBP12.2□□□□□ -0.46
CCNF-204ENST00000564333 RBMY1CP0DJD4 496 aa12.2□□□□□ -0.46
CCNF-204ENST00000564333 RBMY1FQ15415 496 aaKnown RBP12.2□□□□□ -0.46
CCNF-204ENST00000564333 FAM74A4Q5TZK3 123 aa12.2□□□□□ -0.46
CCNF-204ENST00000564333 BAALCQ8WXS3 180 aa12.19□□□□□ -0.46
CCNF-204ENST00000564333 RBMY1BA6NDE4 496 aaKnown RBP12.19□□□□□ -0.46
CCNF-204ENST00000564333 RBMY1EA6NEQ0 496 aaKnown RBP12.19□□□□□ -0.46
CCNF-204ENST00000564333 H3BMM0 161 aa12.19□□□□□ -0.46
CCNF-204ENST00000564333 RBMY1DP0C7P1 496 aaKnown RBP12.19□□□□□ -0.46
CCNF-204ENST00000564333 RPL24P83731 157 aaKnown RBP12.19□□□□□ -0.46
CCNF-204ENST00000564333 RRN3P1Q2M238 152 aa12.19□□□□□ -0.46
CCNF-204ENST00000564333 MAP6D1Q9H9H5 199 aa12.19□□□□□ -0.46
CCNF-204ENST00000564333 CYSLTR1Q9Y271 337 aa12.19□□□□□ -0.46
CCNF-204ENST00000564333 SETXQ7Z333 2677 aaKnown RBP12.19□□□□□ -0.46
CCNF-204ENST00000564333 HERVK_113P61574 105 aa12.18□□□□□ -0.46
CCNF-204ENST00000564333 SCGB2A2Q13296 93 aa12.18□□□□□ -0.46
CCNF-204ENST00000564333 ZNF56Q15929 161 aa12.18□□□□□ -0.46
CCNF-204ENST00000564333 TMEM141Q96I45 108 aa12.17□□□□□ -0.46
CCNF-204ENST00000564333 YAE1D1Q9NRH1 226 aa12.17□□□□□ -0.46
CCNF-204ENST00000564333 POLR2KP53803 58 aaKnown RBP12.17□□□□□ -0.46
CCNF-204ENST00000564333 RIPPLY3P57055 190 aa12.17□□□□□ -0.46
CCNF-204ENST00000564333 DEFB114Q30KQ6 69 aa12.17□□□□□ -0.46
CCNF-204ENST00000564333 RAX2Q96IS3 184 aa12.17□□□□□ -0.46
CCNF-204ENST00000564333 PRSS29PA6NIE9 313 aa12.16□□□□□ -0.46
CCNF-204ENST00000564333 CRYGDP07320 174 aa12.16□□□□□ -0.46
CCNF-204ENST00000564333 CD300EQ496F6 205 aaPredicted RBP12.16□□□□□ -0.46
CCNF-204ENST00000564333 C11orf44Q8N8P7 122 aa12.16□□□□□ -0.46
CCNF-204ENST00000564333 TRBV6-5A0A0K0K1A5 114 aa12.15□□□□□ -0.46
CCNF-204ENST00000564333 A0A1W2PRX2 142 aa12.15□□□□□ -0.46
CCNF-204ENST00000564333 SCGB1A1P11684 91 aa12.15□□□□□ -0.46
CCNF-204ENST00000564333 ZNF876PQ49A33 203 aa12.15□□□□□ -0.46
CCNF-204ENST00000564333 PRADC1Q9BSG0 188 aa12.15□□□□□ -0.46
CCNF-204ENST00000564333 TEX48A0A1B0GUV7 120 aa12.15□□□□□ -0.46
CCNF-204ENST00000564333 SDHAF1A6NFY7 115 aa12.15□□□□□ -0.46
CCNF-204ENST00000564333 VCYO14598 125 aa12.15□□□□□ -0.46
CCNF-204ENST00000564333 CD28P10747 220 aa12.15□□□□□ -0.46
CCNF-204ENST00000564333 FHL3Q13643 280 aa12.15□□□□□ -0.46
CCNF-204ENST00000564333 LYRM7Q5U5X0 104 aa12.15□□□□□ -0.46
CCNF-204ENST00000564333 ZFP2Q6ZN57 461 aa12.15□□□□□ -0.46
CCNF-204ENST00000564333 KIR2DL4Q99706 377 aa12.15□□□□□ -0.46
CCNF-204ENST00000564333 SPAG8Q99932 426 aaPredicted RBP12.15□□□□□ -0.46
CCNF-204ENST00000564333 GAGE13Q4V321 117 aa12.14□□□□□ -0.47
CCNF-204ENST00000564333 TP53TG1Q9Y2A0 90 aa12.14□□□□□ -0.47
CCNF-204ENST00000564333 ZNF256Q9Y2P7 627 aaPredicted RBP12.14□□□□□ -0.47
CCNF-204ENST00000564333 ZNF815PA8K554 130 aa12.13□□□□□ -0.47
CCNF-204ENST00000564333 M0QY20 66 aa12.13□□□□□ -0.47
CCNF-204ENST00000564333 MORN3Q6PF18 240 aaPredicted RBP12.13□□□□□ -0.47
CCNF-204ENST00000564333 TRPT1Q86TN4 253 aaKnown RBP12.13□□□□□ -0.47
CCNF-204ENST00000564333 TIMM17AQ99595 171 aa12.13□□□□□ -0.47
CCNF-204ENST00000564333 SPANXB1Q9NS25 103 aaPredicted RBP12.13□□□□□ -0.47
CCNF-204ENST00000564333 NOTCH2Q04721 2471 aa12.13□□□□□ -0.47
CCNF-204ENST00000564333 TRBV27A0A0K0K1C4 114 aa12.13□□□□□ -0.47
CCNF-204ENST00000564333 HTN1P15515 57 aa12.13□□□□□ -0.47
CCNF-204ENST00000564333 PMVKQ15126 192 aa12.13□□□□□ -0.47
CCNF-204ENST00000564333 SCGB1D4Q6XE38 83 aa12.13□□□□□ -0.47
CCNF-204ENST00000564333 RNASE1P07998 156 aaKnown RBP12.12□□□□□ -0.47
CCNF-204ENST00000564333 CCL24O00175 119 aa12.11□□□□□ -0.47
CCNF-204ENST00000564333 DEFB104AQ8WTQ1 72 aa12.11□□□□□ -0.47
CCNF-204ENST00000564333 TRAV25A0A0B4J276 109 aa12.11□□□□□ -0.47
CCNF-204ENST00000564333 ZNF415Q09FC8 603 aa12.11□□□□□ -0.47
CCNF-204ENST00000564333 AKAP9Q99996 3911 aa12.11□□□□□ -0.47
CCNF-204ENST00000564333 FLNAP21333 2647 aaKnown RBP12.11□□□□□ -0.47
CCNF-204ENST00000564333 IGIPA6NJ69 53 aa12.1□□□□□ -0.47
CCNF-204ENST00000564333 TMEM238C9JI98 176 aa12.1□□□□□ -0.47
CCNF-204ENST00000564333 H3BMG7 143 aa12.1□□□□□ -0.47
CCNF-204ENST00000564333 INSP01308 110 aa12.1□□□□□ -0.47
CCNF-204ENST00000564333 SRSF9Q13242 221 aaKnown RBP eCLIP12.1□□□□□ -0.47
CCNF-204ENST00000564333 SIGMAR1Q99720 223 aa12.1□□□□□ -0.47
CCNF-204ENST00000564333 CITED2Q99967 270 aaPredicted RBP12.1□□□□□ -0.47
CCNF-204ENST00000564333 C16orf95Q9H693 158 aa12.1□□□□□ -0.47
CCNF-204ENST00000564333 PDZD2O15018 2839 aa12.1□□□□□ -0.47
CCNF-204ENST00000564333 SORL1Q92673 2214 aa12.1□□□□□ -0.47
CCNF-204ENST00000564333 CCDC168Q8NDH2 2452 aa12.1□□□□□ -0.47
CCNF-204ENST00000564333 RPL39P62891 51 aaKnown RBP12.09□□□□□ -0.47
CCNF-204ENST00000564333 ODF3L2Q3SX64 289 aa12.09□□□□□ -0.47
CCNF-204ENST00000564333 LINC01006Q8NI28 216 aa12.09□□□□□ -0.47
CCNF-204ENST00000564333 TSSC4Q9Y5U2 329 aaPredicted RBP12.09□□□□□ -0.47
CCNF-204ENST00000564333 C11orf86A6NJI1 115 aa12.09□□□□□ -0.47
CCNF-204ENST00000564333 UBE2D1P51668 147 aa12.09□□□□□ -0.47
CCNF-204ENST00000564333 WFDC2Q14508 124 aa12.09□□□□□ -0.47
CCNF-204ENST00000564333 ATP6V0E2Q8NHE4 81 aa12.09□□□□□ -0.47
CCNF-204ENST00000564333 MRPL16Q9NX20 251 aaKnown RBP12.09□□□□□ -0.47
CCNF-204ENST00000564333 TLN2Q9Y4G6 2542 aa12.09□□□□□ -0.47
CCNF-204ENST00000564333 M0R2P5 195 aa12.08□□□□□ -0.48
CCNF-204ENST00000564333 TSHBP01222 138 aa12.08□□□□□ -0.48
CCNF-204ENST00000564333 RHOHQ15669 191 aa12.08□□□□□ -0.48
CCNF-204ENST00000564333 NSUN5P1Q3KNT7 163 aa12.08□□□□□ -0.48
CCNF-204ENST00000564333 PRM2P04554 102 aa12.07□□□□□ -0.48
CCNF-204ENST00000564333 LINC00467Q9BRT7 94 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms