RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 SMCPP49901 116 aaPredicted RBP7.91□□□□□ -1.14
RNF40-204ENST00000563683 RNASE13Q5GAN3 156 aaKnown RBP7.91□□□□□ -1.14
RNF40-204ENST00000563683 NRACQ8N912 160 aa7.91□□□□□ -1.14
RNF40-204ENST00000563683 RNF183Q96D59 192 aa7.91□□□□□ -1.14
RNF40-204ENST00000563683 C11orf21Q9P2W6 132 aa7.91□□□□□ -1.14
RNF40-204ENST00000563683 TNRC18O15417 2968 aaPredicted RBP7.91□□□□□ -1.14
RNF40-204ENST00000563683 SLURP1P55000 103 aa7.91□□□□□ -1.14
RNF40-204ENST00000563683 C10orf99Q6UWK7 81 aa7.91□□□□□ -1.14
RNF40-204ENST00000563683 TRPT1Q86TN4 253 aaKnown RBP7.91□□□□□ -1.14
RNF40-204ENST00000563683 ZNF415Q09FC8 603 aa7.91□□□□□ -1.14
RNF40-204ENST00000563683 VPREB3Q9UKI3 123 aa7.91□□□□□ -1.14
RNF40-204ENST00000563683 RPL39P62891 51 aaKnown RBP7.9□□□□□ -1.14
RNF40-204ENST00000563683 TRAV8-2A0A0B4J237 113 aa7.9□□□□□ -1.14
RNF40-204ENST00000563683 A6NDX4 124 aa7.9□□□□□ -1.14
RNF40-204ENST00000563683 RPL35AP18077 110 aaKnown RBP7.9□□□□□ -1.14
RNF40-204ENST00000563683 UBE2D1P51668 147 aa7.9□□□□□ -1.14
RNF40-204ENST00000563683 UBE2D3P61077 147 aa7.9□□□□□ -1.14
RNF40-204ENST00000563683 UBE2D2P62837 147 aa7.9□□□□□ -1.14
RNF40-204ENST00000563683 TOMM6Q96B49 74 aa7.9□□□□□ -1.15
RNF40-204ENST00000563683 ELANEP08246 267 aa7.89□□□□□ -1.15
RNF40-204ENST00000563683 PRORYQ9H606 182 aa7.89□□□□□ -1.15
RNF40-204ENST00000563683 AGRNO00468 2067 aa7.89□□□□□ -1.15
RNF40-204ENST00000563683 DOPEY1Q5JWR5 2465 aa7.89□□□□□ -1.15
RNF40-204ENST00000563683 IGHV4OR15-8A0A075B7B6 117 aa7.89□□□□□ -1.15
RNF40-204ENST00000563683 A0A087WW49 117 aa7.89□□□□□ -1.15
RNF40-204ENST00000563683 SUMO4Q6EEV6 95 aa7.89□□□□□ -1.15
RNF40-204ENST00000563683 ZNF575Q86XF7 245 aa7.89□□□□□ -1.15
RNF40-204ENST00000563683 Q8N1Y9 231 aa7.89□□□□□ -1.15
RNF40-204ENST00000563683 NEXN-AS1Q8NBZ9 246 aa7.89□□□□□ -1.15
RNF40-204ENST00000563683 MDFICQ9P1T7 246 aa7.89□□□□□ -1.15
RNF40-204ENST00000563683 CFAP47Q6ZTR5 3102 aa7.89□□□□□ -1.15
RNF40-204ENST00000563683 APRG1Q8IVJ8 170 aa7.88□□□□□ -1.15
RNF40-204ENST00000563683 ZNF625Q96I27 306 aaPredicted RBP7.88□□□□□ -1.15
RNF40-204ENST00000563683 ANKRD17O75179 2603 aaKnown RBP7.88□□□□□ -1.15
RNF40-204ENST00000563683 DMXL2Q8TDJ6 3036 aa7.88□□□□□ -1.15
RNF40-204ENST00000563683 ADARB2-AS1A8MUL3 147 aa7.88□□□□□ -1.15
RNF40-204ENST00000563683 ZFP2Q6ZN57 461 aa7.88□□□□□ -1.15
RNF40-204ENST00000563683 IGHV4-4A0A075B6R2 117 aa7.88□□□□□ -1.15
RNF40-204ENST00000563683 TRAV13-1A0A0B4J241 112 aa7.88□□□□□ -1.15
RNF40-204ENST00000563683 CLPSL1A2RUU4 121 aa7.88□□□□□ -1.15
RNF40-204ENST00000563683 I3L3M4 83 aa7.88□□□□□ -1.15
RNF40-204ENST00000563683 PTH2Q96A98 100 aa7.88□□□□□ -1.15
RNF40-204ENST00000563683 TRGV4A0A0C4DH28 118 aa7.88□□□□□ -1.15
RNF40-204ENST00000563683 INSP01308 110 aa7.88□□□□□ -1.15
RNF40-204ENST00000563683 TMEM101Q96IK0 257 aa7.88□□□□□ -1.15
RNF40-204ENST00000563683 CARD19Q96LW7 228 aa7.88□□□□□ -1.15
RNF40-204ENST00000563683 SS18L2Q9UHA2 77 aa7.88□□□□□ -1.15
RNF40-204ENST00000563683 J3QLI3 93 aa7.87□□□□□ -1.15
RNF40-204ENST00000563683 IGHG4P01861 327 aa7.87□□□□□ -1.15
RNF40-204ENST00000563683 CFHR3Q02985 330 aa7.87□□□□□ -1.15
RNF40-204ENST00000563683 PRR9Q5T870 116 aa7.87□□□□□ -1.15
RNF40-204ENST00000563683 NDUFA11Q86Y39 141 aa7.87□□□□□ -1.15
RNF40-204ENST00000563683 PSMG3-AS1Q96PY0 264 aa7.87□□□□□ -1.15
RNF40-204ENST00000563683 HIST2H2BDQ6DRA6 164 aa7.87□□□□□ -1.15
RNF40-204ENST00000563683 SBSPONQ8IVN8 264 aa7.87□□□□□ -1.15
RNF40-204ENST00000563683 ZFAND2AQ8N6M9 145 aa7.87□□□□□ -1.15
RNF40-204ENST00000563683 TIMM21Q9BVV7 248 aa7.87□□□□□ -1.15
RNF40-204ENST00000563683 SNCGO76070 127 aa7.87□□□□□ -1.15
RNF40-204ENST00000563683 GAGE2BQ13066 116 aa7.87□□□□□ -1.15
RNF40-204ENST00000563683 GAGE2EQ4V326 116 aa7.87□□□□□ -1.15
RNF40-204ENST00000563683 GAGE2DQ9UEU5 116 aa7.87□□□□□ -1.15
RNF40-204ENST00000563683 TCL1BO95988 128 aa7.86□□□□□ -1.15
RNF40-204ENST00000563683 FHL3Q13643 280 aa7.86□□□□□ -1.15
RNF40-204ENST00000563683 GPHB5Q86YW7 130 aa7.86□□□□□ -1.15
RNF40-204ENST00000563683 TMEM141Q96I45 108 aa7.86□□□□□ -1.15
RNF40-204ENST00000563683 SPANXA1Q9NS26 97 aa7.86□□□□□ -1.15
RNF40-204ENST00000563683 BAALCQ8WXS3 180 aa7.86□□□□□ -1.15
RNF40-204ENST00000563683 RPL36AP83881 106 aaKnown RBP7.86□□□□□ -1.15
RNF40-204ENST00000563683 RASL10AQ92737 203 aa7.86□□□□□ -1.15
RNF40-204ENST00000563683 RPL36ALQ969Q0 106 aaKnown RBP7.86□□□□□ -1.15
RNF40-204ENST00000563683 PLEKHB2Q96CS7 222 aa7.86□□□□□ -1.15
RNF40-204ENST00000563683 TTC32Q5I0X7 151 aa7.85□□□□□ -1.15
RNF40-204ENST00000563683 ANKRD29Q8N6D5 301 aa7.85□□□□□ -1.15
RNF40-204ENST00000563683 J3QQQ9 107 aa7.85□□□□□ -1.15
RNF40-204ENST00000563683 K7EMT4 169 aa7.85□□□□□ -1.15
RNF40-204ENST00000563683 AVPP01185 164 aa7.85□□□□□ -1.15
RNF40-204ENST00000563683 C10orf126Q8N4M7 172 aa7.85□□□□□ -1.15
RNF40-204ENST00000563683 ZNRF2Q8NHG8 242 aa7.85□□□□□ -1.15
RNF40-204ENST00000563683 M0QXV9 152 aa7.85□□□□□ -1.15
RNF40-204ENST00000563683 OPRPNQ99935 248 aaPredicted RBP7.85□□□□□ -1.15
RNF40-204ENST00000563683 CHCHD5Q9BSY4 110 aa7.85□□□□□ -1.15
RNF40-204ENST00000563683 PRO1854Q9UHT4 67 aa7.85□□□□□ -1.15
RNF40-204ENST00000563683 DMXL1Q9Y485 3027 aa7.84□□□□□ -1.15
RNF40-204ENST00000563683 B5MCH6 92 aa7.84□□□□□ -1.15
RNF40-204ENST00000563683 DEFB113Q30KQ7 82 aa7.84□□□□□ -1.15
RNF40-204ENST00000563683 OR13C6PQ8NH95 151 aa7.84□□□□□ -1.15
RNF40-204ENST00000563683 A0A0J9YXV3 536 aa7.84□□□□□ -1.15
RNF40-204ENST00000563683 GAGE12JA6NER3 117 aa7.84□□□□□ -1.15
RNF40-204ENST00000563683 SLC25A20O43772 301 aa7.84□□□□□ -1.15
RNF40-204ENST00000563683 HTN3P15516 51 aa7.84□□□□□ -1.15
RNF40-204ENST00000563683 EDN2P20800 178 aa7.84□□□□□ -1.15
RNF40-204ENST00000563683 GAGE4Q13068 117 aa7.84□□□□□ -1.15
RNF40-204ENST00000563683 A0A0J9YX75 114 aa7.83□□□□□ -1.16
RNF40-204ENST00000563683 J3QKU1 62 aa7.83□□□□□ -1.16
RNF40-204ENST00000563683 A0A0J9YY99 117 aa7.83□□□□□ -1.16
RNF40-204ENST00000563683 RHODO00212 210 aa7.83□□□□□ -1.16
RNF40-204ENST00000563683 GAGE7O76087 117 aa7.83□□□□□ -1.16
RNF40-204ENST00000563683 GAGE12FP0CL80 117 aa7.83□□□□□ -1.16
RNF40-204ENST00000563683 GAGE12GP0CL81 117 aa7.83□□□□□ -1.16
RNF40-204ENST00000563683 GAGE12IP0CL82 117 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms