RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 KRBOX1C9JBD0 128 aa10.98□□□□□ -0.65
HDGFL3-203ENST00000563404 C9JQL5 133 aa10.98□□□□□ -0.65
HDGFL3-203ENST00000563404 ARMS2P0C7Q2 107 aa10.98□□□□□ -0.65
HDGFL3-203ENST00000563404 ZNF674Q2M3X9 581 aa10.98□□□□□ -0.65
HDGFL3-203ENST00000563404 CENPWQ5EE01 88 aa10.98□□□□□ -0.65
HDGFL3-203ENST00000563404 DNLZQ5SXM8 178 aa10.98□□□□□ -0.65
HDGFL3-203ENST00000563404 ZC2HC1AQ96GY0 325 aa10.98□□□□□ -0.65
HDGFL3-203ENST00000563404 KLK12Q9UKR0 248 aa10.98□□□□□ -0.65
HDGFL3-203ENST00000563404 COX11Q9Y6N1 276 aa10.98□□□□□ -0.65
HDGFL3-203ENST00000563404 TRBV20OR9-2A0A075B6H5 130 aa10.97□□□□□ -0.65
HDGFL3-203ENST00000563404 A0A087WWL8 130 aa10.97□□□□□ -0.65
HDGFL3-203ENST00000563404 GRIFINA4D1Z8 144 aa10.97□□□□□ -0.65
HDGFL3-203ENST00000563404 IGLV2-8P01709 118 aa10.97□□□□□ -0.65
HDGFL3-203ENST00000563404 FAM162BQ5T6X4 162 aa10.97□□□□□ -0.65
HDGFL3-203ENST00000563404 Q8N976 141 aa10.97□□□□□ -0.65
HDGFL3-203ENST00000563404 SMIM7Q9BQ49 75 aa10.97□□□□□ -0.65
HDGFL3-203ENST00000563404 CHAC1Q9BUX1 264 aa10.97□□□□□ -0.65
HDGFL3-203ENST00000563404 ZNF727A8MUV8 499 aa10.96□□□□□ -0.65
HDGFL3-203ENST00000563404 M0R036 132 aa10.96□□□□□ -0.65
HDGFL3-203ENST00000563404 RHODO00212 210 aa10.96□□□□□ -0.65
HDGFL3-203ENST00000563404 SH2D1AO60880 128 aa10.96□□□□□ -0.65
HDGFL3-203ENST00000563404 FAM74A4Q5TZK3 123 aa10.96□□□□□ -0.65
HDGFL3-203ENST00000563404 CIRBP-AS1Q8TBR5 109 aa10.96□□□□□ -0.65
HDGFL3-203ENST00000563404 RMI2Q96E14 147 aa10.96□□□□□ -0.65
HDGFL3-203ENST00000563404 SFRP2Q96HF1 295 aa10.96□□□□□ -0.65
HDGFL3-203ENST00000563404 TMEM241Q24JQ0 296 aa10.95□□□□□ -0.66
HDGFL3-203ENST00000563404 SYT8Q8NBV8 401 aa10.95□□□□□ -0.66
HDGFL3-203ENST00000563404 UBE2WQ96B02 151 aa10.95□□□□□ -0.66
HDGFL3-203ENST00000563404 URGCP-MRPS24S4R325 110 aa10.95□□□□□ -0.66
HDGFL3-203ENST00000563404 ATRAIDQ6UW56 229 aa10.94□□□□□ -0.66
HDGFL3-203ENST00000563404 OCC1Q8TAD7 63 aa10.94□□□□□ -0.66
HDGFL3-203ENST00000563404 CEBPGP53567 150 aa10.93□□□□□ -0.66
HDGFL3-203ENST00000563404 UBE2D3P61077 147 aa10.93□□□□□ -0.66
HDGFL3-203ENST00000563404 UBE2D2P62837 147 aa10.93□□□□□ -0.66
HDGFL3-203ENST00000563404 COMMD7Q86VX2 200 aa10.93□□□□□ -0.66
HDGFL3-203ENST00000563404 NAT8Q9UHE5 227 aa10.93□□□□□ -0.66
HDGFL3-203ENST00000563404 TMSB15BA0A087X1C1 80 aa10.92□□□□□ -0.66
HDGFL3-203ENST00000563404 TMEM218A2RU14 115 aa10.92□□□□□ -0.66
HDGFL3-203ENST00000563404 C19orf71A6NCJ1 209 aa10.92□□□□□ -0.66
HDGFL3-203ENST00000563404 M0R381 172 aa10.92□□□□□ -0.66
HDGFL3-203ENST00000563404 LINC01559Q495D7 138 aa10.92□□□□□ -0.66
HDGFL3-203ENST00000563404 DAZAP1Q96EP5 407 aaKnown RBP10.92□□□□□ -0.66
HDGFL3-203ENST00000563404 CHCHD7Q9BUK0 85 aa10.92□□□□□ -0.66
HDGFL3-203ENST00000563404 PHLDA3Q9Y5J5 127 aa10.92□□□□□ -0.66
HDGFL3-203ENST00000563404 A0A087WX48 190 aa10.91□□□□□ -0.66
HDGFL3-203ENST00000563404 CXCL1P09341 107 aa10.91□□□□□ -0.66
HDGFL3-203ENST00000563404 ENHOQ6UWT2 76 aa10.91□□□□□ -0.66
HDGFL3-203ENST00000563404 FAM231DQ6ZW35 169 aa10.91□□□□□ -0.66
HDGFL3-203ENST00000563404 LINC01551Q86U37 167 aa10.91□□□□□ -0.66
HDGFL3-203ENST00000563404 TRBV10-1A0A0K0K1A3 114 aa10.9□□□□□ -0.66
HDGFL3-203ENST00000563404 ELOBQ15370 118 aa10.9□□□□□ -0.66
HDGFL3-203ENST00000563404 NDUFA5Q16718 116 aa10.9□□□□□ -0.66
HDGFL3-203ENST00000563404 TRBV7-3A0A075B6L6 115 aa10.89□□□□□ -0.67
HDGFL3-203ENST00000563404 K7EN84 100 aa10.89□□□□□ -0.67
HDGFL3-203ENST00000563404 RPS20P60866 119 aaKnown RBP10.89□□□□□ -0.67
HDGFL3-203ENST00000563404 RPL36AP83881 106 aaKnown RBP10.89□□□□□ -0.67
HDGFL3-203ENST00000563404 PNRC1Q12796 327 aaPredicted RBP10.89□□□□□ -0.67
HDGFL3-203ENST00000563404 SERTAD4-AS1Q5TG53 156 aa10.89□□□□□ -0.67
HDGFL3-203ENST00000563404 ZFP82Q8N141 532 aa10.89□□□□□ -0.67
HDGFL3-203ENST00000563404 OR10G8Q8NGN5 311 aa10.89□□□□□ -0.67
HDGFL3-203ENST00000563404 RPL36ALQ969Q0 106 aaKnown RBP10.89□□□□□ -0.67
HDGFL3-203ENST00000563404 SEC11CQ9BY50 192 aa10.89□□□□□ -0.67
HDGFL3-203ENST00000563404 OXTP01178 125 aa10.88□□□□□ -0.67
HDGFL3-203ENST00000563404 Q0VG73 95 aa10.88□□□□□ -0.67
HDGFL3-203ENST00000563404 PRR27Q6MZM9 219 aa10.88□□□□□ -0.67
HDGFL3-203ENST00000563404 NUDT10Q8NFP7 164 aa10.88□□□□□ -0.67
HDGFL3-203ENST00000563404 NUDT11Q96G61 164 aa10.88□□□□□ -0.67
HDGFL3-203ENST00000563404 OSTCQ9NRP0 149 aa10.88□□□□□ -0.67
HDGFL3-203ENST00000563404 TRBV6-8A0A0A6YYG3 113 aa10.87□□□□□ -0.67
HDGFL3-203ENST00000563404 XKRY2A2RUG3 117 aa10.87□□□□□ -0.67
HDGFL3-203ENST00000563404 TMEM262E9PQX1 116 aa10.87□□□□□ -0.67
HDGFL3-203ENST00000563404 P01737 135 aa10.87□□□□□ -0.67
HDGFL3-203ENST00000563404 RPL23P62829 140 aaKnown RBP10.87□□□□□ -0.67
HDGFL3-203ENST00000563404 MPV17L2Q567V2 206 aa10.87□□□□□ -0.67
HDGFL3-203ENST00000563404 C10orf91Q5T1B1 145 aa10.87□□□□□ -0.67
HDGFL3-203ENST00000563404 KCNIP4Q6PIL6 250 aa10.87□□□□□ -0.67
HDGFL3-203ENST00000563404 NEXN-AS1Q8NBZ9 246 aa10.87□□□□□ -0.67
HDGFL3-203ENST00000563404 C1orf43Q9BWL3 253 aa10.87□□□□□ -0.67
HDGFL3-203ENST00000563404 HNRNPA3P51991 378 aaKnown RBP10.86□□□□□ -0.67
HDGFL3-203ENST00000563404 CT83Q5H943 113 aa10.86□□□□□ -0.67
HDGFL3-203ENST00000563404 C15orf54Q8N8G6 183 aa10.86□□□□□ -0.67
HDGFL3-203ENST00000563404 ISOC2Q96AB3 205 aa10.86□□□□□ -0.67
HDGFL3-203ENST00000563404 F8W036 122 aa10.85□□□□□ -0.67
HDGFL3-203ENST00000563404 RAB4BP61018 213 aa10.85□□□□□ -0.67
HDGFL3-203ENST00000563404 RPL19P84098 196 aaKnown RBP10.85□□□□□ -0.67
HDGFL3-203ENST00000563404 C14orf177Q52M58 125 aa10.85□□□□□ -0.67
HDGFL3-203ENST00000563404 SSBP4Q9BWG4 385 aaPredicted RBP10.85□□□□□ -0.67
HDGFL3-203ENST00000563404 FAM231BA6NCW3 169 aa10.84□□□□□ -0.67
HDGFL3-203ENST00000563404 USP17L23D6RBM5 183 aa10.84□□□□□ -0.67
HDGFL3-203ENST00000563404 PRSS1P07477 247 aa10.84□□□□□ -0.67
HDGFL3-203ENST00000563404 ADIRFQ15847 76 aa10.84□□□□□ -0.67
HDGFL3-203ENST00000563404 OR2D3Q8NGH3 330 aa10.84□□□□□ -0.67
HDGFL3-203ENST00000563404 OR10AG1Q8NH19 301 aa10.84□□□□□ -0.67
HDGFL3-203ENST00000563404 RPP21Q9H633 154 aaKnown RBP10.84□□□□□ -0.67
HDGFL3-203ENST00000563404 A8MWL6 223 aa10.83□□□□□ -0.68
HDGFL3-203ENST00000563404 GATCO43716 136 aaKnown RBP10.83□□□□□ -0.68
HDGFL3-203ENST00000563404 CRPP02741 224 aa10.83□□□□□ -0.68
HDGFL3-203ENST00000563404 ANGP03950 147 aaKnown RBP10.83□□□□□ -0.68
HDGFL3-203ENST00000563404 FOXA3P55318 350 aaPredicted RBP10.83□□□□□ -0.68
HDGFL3-203ENST00000563404 ZNF56Q15929 161 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms