RNA–Protein interactions for RNA: ENST00000563396.1

SMPD3-204, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 3

Gene SMPD3, Length 608 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-204ENST00000563396 BIN3Q9NQY0 253 aa9.32□□□□□ -0.92
SMPD3-204ENST00000563396 FAT1Q14517 4588 aa9.32□□□□□ -0.92
SMPD3-204ENST00000563396 XKRY2A2RUG3 117 aa9.31□□□□□ -0.92
SMPD3-204ENST00000563396 RBFOX3A6NFN3 312 aa9.31□□□□□ -0.92
SMPD3-204ENST00000563396 CTRLP40313 264 aa9.31□□□□□ -0.92
SMPD3-204ENST00000563396 CACNG7P62955 275 aa9.31□□□□□ -0.92
SMPD3-204ENST00000563396 LYPD6BQ8NI32 183 aa9.31□□□□□ -0.92
SMPD3-204ENST00000563396 DAZAP1Q96EP5 407 aaKnown RBP9.31□□□□□ -0.92
SMPD3-204ENST00000563396 CNFNQ9BYD5 112 aa9.31□□□□□ -0.92
SMPD3-204ENST00000563396 MED9Q9NWA0 146 aa9.31□□□□□ -0.92
SMPD3-204ENST00000563396 DNAH8Q96JB1 4490 aa9.3□□□□□ -0.92
SMPD3-204ENST00000563396 A0A087WX48 190 aa9.3□□□□□ -0.92
SMPD3-204ENST00000563396 F2Z2F3 143 aa9.3□□□□□ -0.92
SMPD3-204ENST00000563396 P01737 135 aa9.3□□□□□ -0.92
SMPD3-204ENST00000563396 SMIM17P0DL12 118 aa9.3□□□□□ -0.92
SMPD3-204ENST00000563396 ELOBQ15370 118 aa9.3□□□□□ -0.92
SMPD3-204ENST00000563396 TMEM97Q5BJF2 176 aa9.3□□□□□ -0.92
SMPD3-204ENST00000563396 RMI2Q96E14 147 aa9.3□□□□□ -0.92
SMPD3-204ENST00000563396 KLK12Q9UKR0 248 aa9.3□□□□□ -0.92
SMPD3-204ENST00000563396 PKIAP61925 76 aa9.29□□□□□ -0.92
SMPD3-204ENST00000563396 hCG_2014768A0A024R1R8 64 aa9.28□□□□□ -0.92
SMPD3-204ENST00000563396 TMEM250H0YL14 139 aa9.28□□□□□ -0.92
SMPD3-204ENST00000563396 K7EN84 100 aa9.28□□□□□ -0.92
SMPD3-204ENST00000563396 M0QY20 66 aa9.28□□□□□ -0.92
SMPD3-204ENST00000563396 MPV17L2Q567V2 206 aa9.28□□□□□ -0.92
SMPD3-204ENST00000563396 KCNIP4Q6PIL6 250 aa9.28□□□□□ -0.92
SMPD3-204ENST00000563396 ALKAL2Q6UX46 152 aa9.28□□□□□ -0.92
SMPD3-204ENST00000563396 NTM-AS1Q6ZSK4 140 aa9.28□□□□□ -0.92
SMPD3-204ENST00000563396 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.28□□□□□ -0.92
SMPD3-204ENST00000563396 DNAJC30Q96LL9 226 aa9.28□□□□□ -0.92
SMPD3-204ENST00000563396 TPPP3Q9BW30 176 aa9.28□□□□□ -0.92
SMPD3-204ENST00000563396 EPM2AB3EWF7 344 aa9.27□□□□□ -0.93
SMPD3-204ENST00000563396 F5H697 171 aa9.27□□□□□ -0.93
SMPD3-204ENST00000563396 H7C1H1 209 aa9.27□□□□□ -0.93
SMPD3-204ENST00000563396 J3QL48 77 aa9.27□□□□□ -0.93
SMPD3-204ENST00000563396 NDUFS6O75380 124 aaKnown RBP9.27□□□□□ -0.93
SMPD3-204ENST00000563396 TRGC1P0CF51 173 aa9.27□□□□□ -0.93
SMPD3-204ENST00000563396 BLOC1S1P78537 153 aa9.27□□□□□ -0.93
SMPD3-204ENST00000563396 Q0VG73 95 aa9.27□□□□□ -0.93
SMPD3-204ENST00000563396 SUMO4Q6EEV6 95 aa9.27□□□□□ -0.93
SMPD3-204ENST00000563396 WDR73Q6P4I2 378 aa9.27□□□□□ -0.93
SMPD3-204ENST00000563396 Q6ZSA8 131 aa9.27□□□□□ -0.93
SMPD3-204ENST00000563396 NUDT10Q8NFP7 164 aa9.27□□□□□ -0.93
SMPD3-204ENST00000563396 UBE2WQ96B02 151 aa9.27□□□□□ -0.93
SMPD3-204ENST00000563396 NUDT11Q96G61 164 aa9.27□□□□□ -0.93
SMPD3-204ENST00000563396 RPP21Q9H633 154 aaKnown RBP9.27□□□□□ -0.93
SMPD3-204ENST00000563396 IGKV2D-24A0A075B6R9 120 aa9.26□□□□□ -0.93
SMPD3-204ENST00000563396 MGPP08493 103 aa9.26□□□□□ -0.93
SMPD3-204ENST00000563396 SSTP61278 116 aa9.26□□□□□ -0.93
SMPD3-204ENST00000563396 IQCJQ1A5X6 159 aa9.26□□□□□ -0.93
SMPD3-204ENST00000563396 LYZL1Q6UWQ5 148 aa9.26□□□□□ -0.93
SMPD3-204ENST00000563396 DPH3P1Q9H4G8 78 aa9.26□□□□□ -0.93
SMPD3-204ENST00000563396 VPS13BQ7Z7G8 4022 aa9.26□□□□□ -0.93
SMPD3-204ENST00000563396 LECT2O14960 151 aa9.25□□□□□ -0.93
SMPD3-204ENST00000563396 Q5VSD8 79 aa9.25□□□□□ -0.93
SMPD3-204ENST00000563396 ENHOQ6UWT2 76 aa9.25□□□□□ -0.93
SMPD3-204ENST00000563396 BAALCQ8WXS3 180 aa9.25□□□□□ -0.93
SMPD3-204ENST00000563396 RNASE7Q9H1E1 156 aaKnown RBP9.25□□□□□ -0.93
SMPD3-204ENST00000563396 TRBV25-1A0A075B6N4 114 aa9.24□□□□□ -0.93
SMPD3-204ENST00000563396 CRPP02741 224 aa9.24□□□□□ -0.93
SMPD3-204ENST00000563396 NTF3P20783 257 aa9.24□□□□□ -0.93
SMPD3-204ENST00000563396 RASL11AQ6T310 242 aa9.24□□□□□ -0.93
SMPD3-204ENST00000563396 FAM231DQ6ZW35 169 aa9.24□□□□□ -0.93
SMPD3-204ENST00000563396 OCC1Q8TAD7 63 aa9.24□□□□□ -0.93
SMPD3-204ENST00000563396 PGLYRP4Q96LB8 373 aa9.24□□□□□ -0.93
SMPD3-204ENST00000563396 CHCHD5Q9BSY4 110 aa9.24□□□□□ -0.93
SMPD3-204ENST00000563396 PRR34Q9NV39 138 aa9.24□□□□□ -0.93
SMPD3-204ENST00000563396 MIAQ16674 131 aa9.23□□□□□ -0.93
SMPD3-204ENST00000563396 C15orf54Q8N8G6 183 aa9.23□□□□□ -0.93
SMPD3-204ENST00000563396 Q8N976 141 aa9.23□□□□□ -0.93
SMPD3-204ENST00000563396 FRZBQ92765 325 aa9.23□□□□□ -0.93
SMPD3-204ENST00000563396 C1orf43Q9BWL3 253 aa9.23□□□□□ -0.93
SMPD3-204ENST00000563396 FAM30AQ9NZY2 134 aa9.23□□□□□ -0.93
SMPD3-204ENST00000563396 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.22□□□□□ -0.93
SMPD3-204ENST00000563396 IGHV1-24A0A0C4DH33 117 aa9.22□□□□□ -0.93
SMPD3-204ENST00000563396 TMEM262E9PQX1 116 aa9.22□□□□□ -0.93
SMPD3-204ENST00000563396 ANGP03950 147 aaKnown RBP9.22□□□□□ -0.93
SMPD3-204ENST00000563396 RBX1P62877 108 aa9.22□□□□□ -0.93
SMPD3-204ENST00000563396 CT83Q5H943 113 aa9.22□□□□□ -0.93
SMPD3-204ENST00000563396 GTSF1Q8WW33 167 aa9.22□□□□□ -0.93
SMPD3-204ENST00000563396 NKX2-5P52952 324 aaPredicted RBP9.21□□□□□ -0.94
SMPD3-204ENST00000563396 HAMPP81172 84 aa9.21□□□□□ -0.94
SMPD3-204ENST00000563396 FAM210AQ96ND0 272 aa9.21□□□□□ -0.94
SMPD3-204ENST00000563396 NIT2Q9NQR4 276 aa9.21□□□□□ -0.94
SMPD3-204ENST00000563396 GAGE6Q13070 117 aa9.2□□□□□ -0.94
SMPD3-204ENST00000563396 C14orf177Q52M58 125 aa9.2□□□□□ -0.94
SMPD3-204ENST00000563396 KRTAP26-1Q6PEX3 210 aa9.2□□□□□ -0.94
SMPD3-204ENST00000563396 SRRM2Q9UQ35 2752 aaKnown RBP9.2□□□□□ -0.94
SMPD3-204ENST00000563396 A0A1B0GVG6 124 aa9.19□□□□□ -0.94
SMPD3-204ENST00000563396 FOXA3P55318 350 aaPredicted RBP9.19□□□□□ -0.94
SMPD3-204ENST00000563396 TWIST1Q15672 202 aa9.19□□□□□ -0.94
SMPD3-204ENST00000563396 LINC01551Q86U37 167 aa9.19□□□□□ -0.94
SMPD3-204ENST00000563396 MYCBP2O75592 4640 aa9.19□□□□□ -0.94
SMPD3-204ENST00000563396 A0A1B0GUV1 79 aa9.18□□□□□ -0.94
SMPD3-204ENST00000563396 A6NJY4 79 aa9.18□□□□□ -0.94
SMPD3-204ENST00000563396 A8MWL6 223 aa9.18□□□□□ -0.94
SMPD3-204ENST00000563396 GATCO43716 136 aaKnown RBP9.18□□□□□ -0.94
SMPD3-204ENST00000563396 SMR3BP02814 79 aaPredicted RBP9.18□□□□□ -0.94
SMPD3-204ENST00000563396 LINC00269Q8N2A0 174 aa9.18□□□□□ -0.94
SMPD3-204ENST00000563396 GATD1Q8NB37 220 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms