RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 IGKV2D-26A0A0A0MRZ7 120 aa13.89□□□□□ -0.19
SMPD3-203ENST00000563226 MPV17L2Q567V2 206 aa13.89□□□□□ -0.19
SMPD3-203ENST00000563226 PCP2Q8IVA1 136 aa13.89□□□□□ -0.19
SMPD3-203ENST00000563226 P0DMU3 169 aa13.88□□□□□ -0.19
SMPD3-203ENST00000563226 FAM231AP0DMU4 169 aa13.88□□□□□ -0.19
SMPD3-203ENST00000563226 FAM231CP0DMU5 169 aa13.88□□□□□ -0.19
SMPD3-203ENST00000563226 NMUP48645 174 aa13.88□□□□□ -0.19
SMPD3-203ENST00000563226 RPL39P62891 51 aaKnown RBP13.88□□□□□ -0.19
SMPD3-203ENST00000563226 COL5A1-AS1Q5SY13 56 aa13.88□□□□□ -0.19
SMPD3-203ENST00000563226 UFSP1Q6NVU6 142 aa13.88□□□□□ -0.19
SMPD3-203ENST00000563226 NEXN-AS1Q8NBZ9 246 aa13.88□□□□□ -0.19
SMPD3-203ENST00000563226 KIR2DL4Q99706 377 aa13.88□□□□□ -0.19
SMPD3-203ENST00000563226 C19orf73Q9NVV2 129 aa13.88□□□□□ -0.19
SMPD3-203ENST00000563226 MRPL16Q9NX20 251 aaKnown RBP13.88□□□□□ -0.19
SMPD3-203ENST00000563226 TP53TG1Q9Y2A0 90 aa13.88□□□□□ -0.19
SMPD3-203ENST00000563226 C2CD3Q4AC94 2353 aa13.88□□□□□ -0.19
SMPD3-203ENST00000563226 NDUFA11Q86Y39 141 aa13.87□□□□□ -0.19
SMPD3-203ENST00000563226 BAALCQ8WXS3 180 aa13.87□□□□□ -0.19
SMPD3-203ENST00000563226 TMEM208Q9BTX3 173 aa13.87□□□□□ -0.19
SMPD3-203ENST00000563226 TRAV12-1A0A0B4J245 112 aa13.87□□□□□ -0.19
SMPD3-203ENST00000563226 ZC2HC1BQ5TFG8 222 aa13.87□□□□□ -0.19
SMPD3-203ENST00000563226 GTSCR1Q86UQ5 136 aa13.87□□□□□ -0.19
SMPD3-203ENST00000563226 BOD1L2Q8IYS8 172 aa13.87□□□□□ -0.19
SMPD3-203ENST00000563226 CYSLTR1Q9Y271 337 aa13.87□□□□□ -0.19
SMPD3-203ENST00000563226 TSHBP01222 138 aa13.86□□□□□ -0.19
SMPD3-203ENST00000563226 BEAN1Q3B7T3 259 aa13.86□□□□□ -0.19
SMPD3-203ENST00000563226 ERASQ7Z444 233 aa13.86□□□□□ -0.19
SMPD3-203ENST00000563226 CFAP126Q5VTH2 177 aa13.86□□□□□ -0.19
SMPD3-203ENST00000563226 Q6ZSN1 163 aa13.86□□□□□ -0.19
SMPD3-203ENST00000563226 Q9UF83 564 aa13.86□□□□□ -0.19
SMPD3-203ENST00000563226 A8MWV9 139 aa13.85□□□□□ -0.19
SMPD3-203ENST00000563226 GIG44P09565 113 aaPredicted RBP13.85□□□□□ -0.19
SMPD3-203ENST00000563226 RIPPLY3P57055 190 aa13.85□□□□□ -0.19
SMPD3-203ENST00000563226 TTTY13Q9BZ97 58 aa13.85□□□□□ -0.19
SMPD3-203ENST00000563226 F8VRH5 84 aa13.84□□□□□ -0.19
SMPD3-203ENST00000563226 PTH2Q96A98 100 aa13.84□□□□□ -0.19
SMPD3-203ENST00000563226 CHTOPQ9Y3Y2 248 aaKnown RBP13.84□□□□□ -0.19
SMPD3-203ENST00000563226 IGIPA6NJ69 53 aa13.84□□□□□ -0.19
SMPD3-203ENST00000563226 H7C1H1 209 aa13.84□□□□□ -0.19
SMPD3-203ENST00000563226 PIK3CD-AS1Q5SR53 167 aa13.84□□□□□ -0.19
SMPD3-203ENST00000563226 PF4P02776 101 aa13.83□□□□□ -0.2
SMPD3-203ENST00000563226 BVES-AS1Q5T3Y7 98 aa13.83□□□□□ -0.2
SMPD3-203ENST00000563226 LINC00482Q8N8I6 264 aa13.83□□□□□ -0.2
SMPD3-203ENST00000563226 SPXQ9BT56 116 aa13.83□□□□□ -0.2
SMPD3-203ENST00000563226 EDA2RQ9HAV5 297 aa13.83□□□□□ -0.2
SMPD3-203ENST00000563226 PRSS29PA6NIE9 313 aa13.83□□□□□ -0.2
SMPD3-203ENST00000563226 RPL35AP18077 110 aaKnown RBP13.83□□□□□ -0.2
SMPD3-203ENST00000563226 PLNP26678 52 aa13.82□□□□□ -0.2
SMPD3-203ENST00000563226 SPATA3Q8NHX4 192 aa13.82□□□□□ -0.2
SMPD3-203ENST00000563226 IL17DQ8TAD2 202 aa13.82□□□□□ -0.2
SMPD3-203ENST00000563226 CMC4P56277 68 aaPredicted RBP13.81□□□□□ -0.2
SMPD3-203ENST00000563226 Q6ZVH6 145 aa13.81□□□□□ -0.2
SMPD3-203ENST00000563226 FAM110AQ9BQ89 295 aa13.81□□□□□ -0.2
SMPD3-203ENST00000563226 I3L3M4 83 aa13.81□□□□□ -0.2
SMPD3-203ENST00000563226 RNASE8Q8TDE3 154 aaKnown RBP13.81□□□□□ -0.2
SMPD3-203ENST00000563226 NOTCH3Q9UM47 2321 aa13.8□□□□□ -0.2
SMPD3-203ENST00000563226 DLEU1O43261 78 aa13.8□□□□□ -0.2
SMPD3-203ENST00000563226 VWFP04275 2813 aa13.8□□□□□ -0.2
SMPD3-203ENST00000563226 RS1O15537 224 aa13.79□□□□□ -0.2
SMPD3-203ENST00000563226 G0S2P27469 103 aa13.79□□□□□ -0.2
SMPD3-203ENST00000563226 RHOHQ15669 191 aa13.79□□□□□ -0.2
SMPD3-203ENST00000563226 C12orf54Q6X4T0 127 aa13.78□□□□□ -0.2
SMPD3-203ENST00000563226 TIMM17AQ99595 171 aa13.78□□□□□ -0.2
SMPD3-203ENST00000563226 TENM1Q9UKZ4 2725 aa13.78□□□□□ -0.2
SMPD3-203ENST00000563226 CRLF1O75462 422 aa13.78□□□□□ -0.2
SMPD3-203ENST00000563226 ZNF25P17030 456 aaPredicted RBP13.78□□□□□ -0.2
SMPD3-203ENST00000563226 OPRPNQ99935 248 aaPredicted RBP13.78□□□□□ -0.2
SMPD3-203ENST00000563226 TRGV1A0A0A0MS02 117 aa13.77□□□□□ -0.21
SMPD3-203ENST00000563226 RHODO00212 210 aa13.77□□□□□ -0.21
SMPD3-203ENST00000563226 TMEM141Q96I45 108 aa13.77□□□□□ -0.21
SMPD3-203ENST00000563226 IGLV4-69A0A075B6H9 119 aa13.76□□□□□ -0.21
SMPD3-203ENST00000563226 LINC01549A6NIU2 74 aa13.76□□□□□ -0.21
SMPD3-203ENST00000563226 IGHV3-53P01767 116 aa13.76□□□□□ -0.21
SMPD3-203ENST00000563226 FOSL1P15407 271 aa13.76□□□□□ -0.21
SMPD3-203ENST00000563226 EMP1P54849 157 aa13.76□□□□□ -0.21
SMPD3-203ENST00000563226 LINC00469Q8N7U9 141 aa13.76□□□□□ -0.21
SMPD3-203ENST00000563226 C20orf203Q8NBC4 194 aa13.76□□□□□ -0.21
SMPD3-203ENST00000563226 TMEM263Q8WUH6 116 aaKnown RBP13.76□□□□□ -0.21
SMPD3-203ENST00000563226 TNFRSF18Q9Y5U5 241 aa13.76□□□□□ -0.21
SMPD3-203ENST00000563226 Q6ZTI0 123 aa13.76□□□□□ -0.21
SMPD3-203ENST00000563226 MAPKAPK5-AS1Q8N8E1 139 aa13.76□□□□□ -0.21
SMPD3-203ENST00000563226 SIVA1O15304 175 aa13.75□□□□□ -0.21
SMPD3-203ENST00000563226 PMVKQ15126 192 aa13.75□□□□□ -0.21
SMPD3-203ENST00000563226 TMEM97Q5BJF2 176 aa13.75□□□□□ -0.21
SMPD3-203ENST00000563226 CSNK1G2-AS1Q8NCQ2 148 aa13.75□□□□□ -0.21
SMPD3-203ENST00000563226 CST9LQ9H4G1 147 aa13.75□□□□□ -0.21
SMPD3-203ENST00000563226 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.75□□□□□ -0.21
SMPD3-203ENST00000563226 TRAV8-6A0A0B4J262 113 aa13.74□□□□□ -0.21
SMPD3-203ENST00000563226 PLAC8L1A1L4L8 177 aa13.73□□□□□ -0.21
SMPD3-203ENST00000563226 C11orf86A6NJI1 115 aa13.73□□□□□ -0.21
SMPD3-203ENST00000563226 ZNF479Q96JC4 524 aa13.73□□□□□ -0.21
SMPD3-203ENST00000563226 NOP10Q9NPE3 64 aaKnown RBP13.73□□□□□ -0.21
SMPD3-203ENST00000563226 ZMAT5Q9UDW3 170 aaKnown RBP13.73□□□□□ -0.21
SMPD3-203ENST00000563226 OR4C5Q8NGB2 326 aa13.72□□□□□ -0.21
SMPD3-203ENST00000563226 TRBV25-1A0A075B6N4 114 aa13.71□□□□□ -0.21
SMPD3-203ENST00000563226 IGHV3-38A0A0C4DH36 116 aa13.71□□□□□ -0.21
SMPD3-203ENST00000563226 PHLDA1Q8WV24 401 aaPredicted RBP13.71□□□□□ -0.21
SMPD3-203ENST00000563226 TAX1BP3O14907 124 aa13.71□□□□□ -0.21
SMPD3-203ENST00000563226 HSD52Q0P140 79 aa13.71□□□□□ -0.21
SMPD3-203ENST00000563226 ZNRF2Q8NHG8 242 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms