RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 VPREB3Q9UKI3 123 aa9.64□□□□□ -0.87
USB1-207ENST00000563149 ATRXP46100 2492 aa9.64□□□□□ -0.87
USB1-207ENST00000563149 HOXD3P31249 432 aaPredicted RBP9.63□□□□□ -0.87
USB1-207ENST00000563149 SMCPP49901 116 aaPredicted RBP9.63□□□□□ -0.87
USB1-207ENST00000563149 SBSPONQ8IVN8 264 aa9.63□□□□□ -0.87
USB1-207ENST00000563149 DEFB104AQ8WTQ1 72 aa9.63□□□□□ -0.87
USB1-207ENST00000563149 A0A096LNT2 108 aa9.63□□□□□ -0.87
USB1-207ENST00000563149 Q5PR19 223 aa9.63□□□□□ -0.87
USB1-207ENST00000563149 GTSF1LQ9H1H1 148 aa9.63□□□□□ -0.87
USB1-207ENST00000563149 A0A0B4J2C4 111 aa9.62□□□□□ -0.87
USB1-207ENST00000563149 A8MWV9 139 aa9.62□□□□□ -0.87
USB1-207ENST00000563149 TCTEX1D4Q5JR98 221 aa9.62□□□□□ -0.87
USB1-207ENST00000563149 Q6YL49 198 aa9.62□□□□□ -0.87
USB1-207ENST00000563149 MTURNQ8N3F0 131 aa9.62□□□□□ -0.87
USB1-207ENST00000563149 OPRPNQ99935 248 aaPredicted RBP9.62□□□□□ -0.87
USB1-207ENST00000563149 ZNF702PQ9H963 129 aa9.62□□□□□ -0.87
USB1-207ENST00000563149 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.61□□□□□ -0.87
USB1-207ENST00000563149 FSHBP01225 129 aa9.61□□□□□ -0.87
USB1-207ENST00000563149 M0QXV9 152 aa9.6□□□□□ -0.87
USB1-207ENST00000563149 TCL1BO95988 128 aa9.6□□□□□ -0.87
USB1-207ENST00000563149 MRPS36P82909 103 aaKnown RBP9.6□□□□□ -0.87
USB1-207ENST00000563149 A0A0J9YXV3 536 aa9.6□□□□□ -0.87
USB1-207ENST00000563149 M0R2P5 195 aa9.6□□□□□ -0.87
USB1-207ENST00000563149 TGFAP01135 160 aa9.6□□□□□ -0.87
USB1-207ENST00000563149 TEN1Q86WV5 123 aa9.6□□□□□ -0.87
USB1-207ENST00000563149 PPDPFLQ8WWR9 84 aa9.6□□□□□ -0.87
USB1-207ENST00000563149 DUX5Q96PT3 197 aa9.6□□□□□ -0.87
USB1-207ENST00000563149 LINC00467Q9BRT7 94 aa9.6□□□□□ -0.87
USB1-207ENST00000563149 TNFRSF18Q9Y5U5 241 aa9.6□□□□□ -0.87
USB1-207ENST00000563149 A4D1N5 150 aa9.59□□□□□ -0.87
USB1-207ENST00000563149 IGHV3-33P01772 117 aa9.59□□□□□ -0.87
USB1-207ENST00000563149 RBMY1A1P0DJD3 496 aaKnown RBP9.59□□□□□ -0.87
USB1-207ENST00000563149 RBMY1CP0DJD4 496 aa9.59□□□□□ -0.87
USB1-207ENST00000563149 SCGB1C2P0DMR2 95 aa9.59□□□□□ -0.87
USB1-207ENST00000563149 INSL3P51460 131 aa9.59□□□□□ -0.87
USB1-207ENST00000563149 ZNF415Q09FC8 603 aa9.59□□□□□ -0.87
USB1-207ENST00000563149 SMAGPQ0VAQ4 97 aa9.59□□□□□ -0.87
USB1-207ENST00000563149 RBMY1FQ15415 496 aaKnown RBP9.59□□□□□ -0.87
USB1-207ENST00000563149 TMEM263Q8WUH6 116 aaKnown RBP9.59□□□□□ -0.87
USB1-207ENST00000563149 H3BMM0 161 aa9.58□□□□□ -0.88
USB1-207ENST00000563149 CD28P10747 220 aa9.58□□□□□ -0.88
USB1-207ENST00000563149 DEFB131AP59861 70 aa9.58□□□□□ -0.88
USB1-207ENST00000563149 DNAJC30Q96LL9 226 aa9.58□□□□□ -0.88
USB1-207ENST00000563149 PEMTQ9UBM1 199 aa9.58□□□□□ -0.88
USB1-207ENST00000563149 ERG28Q9UKR5 140 aa9.58□□□□□ -0.88
USB1-207ENST00000563149 A0A0J9YXY3 114 aa9.58□□□□□ -0.88
USB1-207ENST00000563149 MUSTN1Q8IVN3 82 aa9.58□□□□□ -0.88
USB1-207ENST00000563149 ZNF418Q8TF45 676 aaPredicted RBP9.58□□□□□ -0.88
USB1-207ENST00000563149 TIMM21Q9BVV7 248 aa9.58□□□□□ -0.88
USB1-207ENST00000563149 SPANXA1Q9NS26 97 aa9.58□□□□□ -0.88
USB1-207ENST00000563149 KNCNA6PVL3 124 aa9.57□□□□□ -0.88
USB1-207ENST00000563149 SFTA2Q6UW10 78 aa9.57□□□□□ -0.88
USB1-207ENST00000563149 DUX3Q96PT4 197 aa9.57□□□□□ -0.88
USB1-207ENST00000563149 SPXQ9BT56 116 aa9.57□□□□□ -0.88
USB1-207ENST00000563149 IGHV1-58A0A0C4DH39 117 aa9.56□□□□□ -0.88
USB1-207ENST00000563149 TINCRA0A1B0GVN0 87 aa9.56□□□□□ -0.88
USB1-207ENST00000563149 IGHV3-30-3P0DP02 117 aa9.56□□□□□ -0.88
USB1-207ENST00000563149 Q8N2B8 174 aa9.56□□□□□ -0.88
USB1-207ENST00000563149 FAM104AQ969W3 186 aa9.56□□□□□ -0.88
USB1-207ENST00000563149 CARD19Q96LW7 228 aa9.55□□□□□ -0.88
USB1-207ENST00000563149 SPANXDQ9BXN6 97 aa9.55□□□□□ -0.88
USB1-207ENST00000563149 SPANXCQ9NY87 97 aa9.55□□□□□ -0.88
USB1-207ENST00000563149 SLURP1P55000 103 aa9.55□□□□□ -0.88
USB1-207ENST00000563149 NRGNQ92686 78 aa9.55□□□□□ -0.88
USB1-207ENST00000563149 LINC01600Q96MT4 127 aa9.55□□□□□ -0.88
USB1-207ENST00000563149 AKAP6Q13023 2319 aa9.54□□□□□ -0.88
USB1-207ENST00000563149 IGHV3-64A0A075B6Q5 118 aa9.54□□□□□ -0.88
USB1-207ENST00000563149 RBMY1BA6NDE4 496 aaKnown RBP9.54□□□□□ -0.88
USB1-207ENST00000563149 RBMY1EA6NEQ0 496 aaKnown RBP9.54□□□□□ -0.88
USB1-207ENST00000563149 CIDEAO60543 219 aa9.54□□□□□ -0.88
USB1-207ENST00000563149 RBMY1DP0C7P1 496 aaKnown RBP9.54□□□□□ -0.88
USB1-207ENST00000563149 BEAN1Q3B7T3 259 aa9.54□□□□□ -0.88
USB1-207ENST00000563149 CLUHP3Q96NS8 147 aa9.54□□□□□ -0.88
USB1-207ENST00000563149 CHCHD7Q9BUK0 85 aa9.54□□□□□ -0.88
USB1-207ENST00000563149 CDIP1Q9H305 208 aa9.54□□□□□ -0.88
USB1-207ENST00000563149 UBE2D4Q9Y2X8 147 aa9.54□□□□□ -0.88
USB1-207ENST00000563149 IGHV3-73A0A0B4J1V6 119 aa9.53□□□□□ -0.88
USB1-207ENST00000563149 TRBV30A0A0K0K1B3 111 aa9.53□□□□□ -0.88
USB1-207ENST00000563149 A0A1B0GV72 72 aa9.53□□□□□ -0.88
USB1-207ENST00000563149 TMEM262E9PQX1 116 aa9.53□□□□□ -0.88
USB1-207ENST00000563149 EIF4EBP3O60516 100 aaPredicted RBP9.53□□□□□ -0.88
USB1-207ENST00000563149 IGHV3-53P01767 116 aa9.53□□□□□ -0.88
USB1-207ENST00000563149 IGHV4-31P0DP07 118 aa9.53□□□□□ -0.88
USB1-207ENST00000563149 PROK1P58294 105 aa9.53□□□□□ -0.88
USB1-207ENST00000563149 C4orf3Q8WVX3 66 aa9.53□□□□□ -0.88
USB1-207ENST00000563149 RNF183Q96D59 192 aa9.53□□□□□ -0.88
USB1-207ENST00000563149 RAX2Q96IS3 184 aa9.53□□□□□ -0.88
USB1-207ENST00000563149 LITAFQ99732 161 aa9.53□□□□□ -0.88
USB1-207ENST00000563149 SVEP1Q4LDE5 3571 aa9.53□□□□□ -0.88
USB1-207ENST00000563149 ASH1LQ9NR48 2969 aaKnown RBP9.53□□□□□ -0.88
USB1-207ENST00000563149 SLC25A20O43772 301 aa9.52□□□□□ -0.88
USB1-207ENST00000563149 HTN1P15515 57 aa9.52□□□□□ -0.88
USB1-207ENST00000563149 ATXN8Q156A1 80 aa9.52□□□□□ -0.88
USB1-207ENST00000563149 RS1O15537 224 aa9.52□□□□□ -0.89
USB1-207ENST00000563149 TIMM17BO60830 172 aa9.52□□□□□ -0.89
USB1-207ENST00000563149 VSIG2Q96IQ7 327 aa9.52□□□□□ -0.89
USB1-207ENST00000563149 MAP6D1Q9H9H5 199 aa9.52□□□□□ -0.89
USB1-207ENST00000563149 BEX4Q9NWD9 120 aaPredicted RBP9.52□□□□□ -0.89
USB1-207ENST00000563149 NDUFA12Q9UI09 145 aa9.52□□□□□ -0.89
USB1-207ENST00000563149 ZFHX3Q15911 3703 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 134.7 ms