RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 ODAMA1E959 279 aa1.35□□□□□ -2.19
HDGFL3-202ENST00000562702 ZNF670-ZNF695F2Z2N8 137 aa1.35□□□□□ -2.19
HDGFL3-202ENST00000562702 M0R143 59 aa1.35□□□□□ -2.19
HDGFL3-202ENST00000562702 CORTO00230 105 aa1.35□□□□□ -2.19
HDGFL3-202ENST00000562702 CDC42EP2O14613 210 aa1.35□□□□□ -2.19
HDGFL3-202ENST00000562702 NPFFO15130 113 aa1.35□□□□□ -2.19
HDGFL3-202ENST00000562702 LEPROTO15243 131 aa1.35□□□□□ -2.19
HDGFL3-202ENST00000562702 LYRM1O43325 122 aa1.35□□□□□ -2.19
HDGFL3-202ENST00000562702 IGKV1D-12P01611 117 aa1.35□□□□□ -2.19
HDGFL3-202ENST00000562702 IGLV6-57P01721 117 aa1.35□□□□□ -2.19
HDGFL3-202ENST00000562702 IGHV1-69P01742 117 aa1.35□□□□□ -2.19
HDGFL3-202ENST00000562702 IGLV7-43P04211 117 aa1.35□□□□□ -2.19
HDGFL3-202ENST00000562702 CD28P10747 220 aa1.35□□□□□ -2.19
HDGFL3-202ENST00000562702 HLA-DMBP28068 263 aa1.35□□□□□ -2.19
HDGFL3-202ENST00000562702 SSR2P43308 183 aa1.35□□□□□ -2.19
HDGFL3-202ENST00000562702 TMEM258P61165 79 aa1.35□□□□□ -2.19
HDGFL3-202ENST00000562702 HBBP68871 147 aa1.35□□□□□ -2.19
HDGFL3-202ENST00000562702 LGALSLQ3ZCW2 172 aaPredicted RBP1.35□□□□□ -2.19
HDGFL3-202ENST00000562702 GLYATL3Q5SZD4 288 aa1.35□□□□□ -2.19
HDGFL3-202ENST00000562702 C10orf91Q5T1B1 145 aa1.35□□□□□ -2.19
HDGFL3-202ENST00000562702 FAM104BQ5XKR9 115 aa1.35□□□□□ -2.19
HDGFL3-202ENST00000562702 SCIMPQ6UWF3 145 aa1.35□□□□□ -2.19
HDGFL3-202ENST00000562702 TEX261Q6UWH6 196 aa1.35□□□□□ -2.19
HDGFL3-202ENST00000562702 LCN15Q6UWW0 184 aa1.35□□□□□ -2.19
HDGFL3-202ENST00000562702 Q6ZQT7 251 aa1.35□□□□□ -2.19
HDGFL3-202ENST00000562702 TMEM136Q6ZRR5 245 aa1.35□□□□□ -2.19
HDGFL3-202ENST00000562702 TEX29Q8N6K0 151 aa1.35□□□□□ -2.19
HDGFL3-202ENST00000562702 SIGLECL1Q8N7X8 197 aa1.35□□□□□ -2.19
HDGFL3-202ENST00000562702 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.35□□□□□ -2.19
HDGFL3-202ENST00000562702 OR10P1Q8NGE3 313 aa1.35□□□□□ -2.19
HDGFL3-202ENST00000562702 RAB37Q96AX2 223 aa1.35□□□□□ -2.19
HDGFL3-202ENST00000562702 C14orf144Q96I85 54 aa1.35□□□□□ -2.19
HDGFL3-202ENST00000562702 NPCDR1Q9BY65 106 aa1.35□□□□□ -2.19
HDGFL3-202ENST00000562702 TMEM133Q9H2Q1 129 aa1.35□□□□□ -2.19
HDGFL3-202ENST00000562702 DUSP21Q9H596 190 aa1.35□□□□□ -2.19
HDGFL3-202ENST00000562702 COA4Q9NYJ1 87 aa1.35□□□□□ -2.19
HDGFL3-202ENST00000562702 EPDR1Q9UM22 224 aa1.35□□□□□ -2.19
HDGFL3-202ENST00000562702 TNFSF18Q9UNG2 199 aa1.35□□□□□ -2.19
HDGFL3-202ENST00000562702 ZFP30Q9Y2G7 519 aa1.35□□□□□ -2.19
HDGFL3-202ENST00000562702 AP4S1Q9Y587 144 aa1.35□□□□□ -2.19
HDGFL3-202ENST00000562702 TIMM9Q9Y5J7 89 aa1.35□□□□□ -2.19
HDGFL3-202ENST00000562702 BIRC6Q9NR09 4857 aa1.35□□□□□ -2.19
HDGFL3-202ENST00000562702 KMT2CQ8NEZ4 4911 aaKnown RBP1.35□□□□□ -2.19
HDGFL3-202ENST00000562702 RYR2Q92736 4967 aa1.35□□□□□ -2.19
HDGFL3-202ENST00000562702 TRAV27A0A087WT01 109 aa1.34□□□□□ -2.19
HDGFL3-202ENST00000562702 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.34□□□□□ -2.19
HDGFL3-202ENST00000562702 PIGBOS1A0A0B4J2F0 54 aa1.34□□□□□ -2.19
HDGFL3-202ENST00000562702 A0A0D9SG52 128 aa1.34□□□□□ -2.19
HDGFL3-202ENST00000562702 A0A1B0GW64 132 aa1.34□□□□□ -2.19
HDGFL3-202ENST00000562702 LOC107986453A0A1B0GWG9 222 aa1.34□□□□□ -2.19
HDGFL3-202ENST00000562702 A0A1W2PNN7 141 aa1.34□□□□□ -2.19
HDGFL3-202ENST00000562702 TMEM235A6NFC5 223 aa1.34□□□□□ -2.19
HDGFL3-202ENST00000562702 IFITM5A6NNB3 132 aa1.34□□□□□ -2.19
HDGFL3-202ENST00000562702 H3BMG7 143 aa1.34□□□□□ -2.19
HDGFL3-202ENST00000562702 H7BYZ3 331 aa1.34□□□□□ -2.19
HDGFL3-202ENST00000562702 UQCRQO14949 82 aa1.34□□□□□ -2.19
HDGFL3-202ENST00000562702 IGKV1D-33P01593 117 aa1.34□□□□□ -2.19
HDGFL3-202ENST00000562702 IGKV1-33P01594 117 aa1.34□□□□□ -2.19
HDGFL3-202ENST00000562702 PMP2P02689 132 aa1.34□□□□□ -2.19
HDGFL3-202ENST00000562702 MT-ND4LP03901 98 aa1.34□□□□□ -2.19
HDGFL3-202ENST00000562702 CXCL1P09341 107 aa1.34□□□□□ -2.19
HDGFL3-202ENST00000562702 INAFM2P0DMQ5 153 aa1.34□□□□□ -2.19
HDGFL3-202ENST00000562702 TPT1P13693 172 aaKnown RBP1.34□□□□□ -2.19
HDGFL3-202ENST00000562702 FKBP2P26885 142 aaKnown RBP1.34□□□□□ -2.19
HDGFL3-202ENST00000562702 ZNF93P35789 620 aaPredicted RBP1.34□□□□□ -2.19
HDGFL3-202ENST00000562702 FOXA1P55317 472 aa1.34□□□□□ -2.19
HDGFL3-202ENST00000562702 DSCR4P56555 118 aaPredicted RBP1.34□□□□□ -2.19
HDGFL3-202ENST00000562702 TSPEAR-AS2P59090 65 aa1.34□□□□□ -2.19
HDGFL3-202ENST00000562702 CDK6Q00534 326 aa1.34□□□□□ -2.19
HDGFL3-202ENST00000562702 FOXF1Q12946 379 aa1.34□□□□□ -2.19
HDGFL3-202ENST00000562702 KLRD1Q13241 179 aa1.34□□□□□ -2.19
HDGFL3-202ENST00000562702 ZNF141Q15928 474 aa1.34□□□□□ -2.19
HDGFL3-202ENST00000562702 TMEM155Q4W5P6 130 aa1.34□□□□□ -2.19
HDGFL3-202ENST00000562702 LINC01554Q52M75 96 aa1.34□□□□□ -2.19
HDGFL3-202ENST00000562702 COL5A1-AS1Q5SY13 56 aa1.34□□□□□ -2.19
HDGFL3-202ENST00000562702 LDLRAD2Q5SZI1 272 aa1.34□□□□□ -2.19
HDGFL3-202ENST00000562702 TMEM244Q5VVB8 128 aa1.34□□□□□ -2.19
HDGFL3-202ENST00000562702 SLC48A1Q6P1K1 146 aa1.34□□□□□ -2.19
HDGFL3-202ENST00000562702 HAGHLQ6PII5 290 aaPredicted RBP1.34□□□□□ -2.19
HDGFL3-202ENST00000562702 ZNF322Q6U7Q0 402 aaPredicted RBP1.34□□□□□ -2.19
HDGFL3-202ENST00000562702 IZUMO2Q6UXV1 221 aa1.34□□□□□ -2.19
HDGFL3-202ENST00000562702 SDIM1Q6ZPB5 146 aa1.34□□□□□ -2.19
HDGFL3-202ENST00000562702 COMMD6Q7Z4G1 85 aa1.34□□□□□ -2.19
HDGFL3-202ENST00000562702 LHFPL1Q86WI0 220 aa1.34□□□□□ -2.19
HDGFL3-202ENST00000562702 SVBPQ8N300 66 aa1.34□□□□□ -2.19
HDGFL3-202ENST00000562702 LINC00471Q8N535 108 aa1.34□□□□□ -2.19
HDGFL3-202ENST00000562702 KCNRGQ8N5I3 272 aa1.34□□□□□ -2.19
HDGFL3-202ENST00000562702 C3orf56Q8N813 242 aa1.34□□□□□ -2.19
HDGFL3-202ENST00000562702 OR5D14Q8NGL3 314 aa1.34□□□□□ -2.19
HDGFL3-202ENST00000562702 OR5C1Q8NGR4 320 aa1.34□□□□□ -2.19
HDGFL3-202ENST00000562702 B9D2Q9BPU9 175 aa1.34□□□□□ -2.19
HDGFL3-202ENST00000562702 TSSK6Q9BXA6 273 aa1.34□□□□□ -2.19
HDGFL3-202ENST00000562702 MRPL32Q9BYC8 188 aaKnown RBP1.34□□□□□ -2.19
HDGFL3-202ENST00000562702 BPESC1Q9GZL8 116 aa1.34□□□□□ -2.19
HDGFL3-202ENST00000562702 CST9LQ9H4G1 147 aa1.34□□□□□ -2.19
HDGFL3-202ENST00000562702 OTORQ9NRC9 128 aa1.34□□□□□ -2.19
HDGFL3-202ENST00000562702 DSCAML1Q8TD84 2053 aa1.34□□□□□ -2.19
HDGFL3-202ENST00000562702 HYDINQ4G0P3 5121 aa1.34□□□□□ -2.2
HDGFL3-202ENST00000562702 COL7A1Q02388 2944 aa1.33□□□□□ -2.2
HDGFL3-202ENST00000562702 TRAV30A0A087WSZ9 112 aa1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 141.8 ms