RNA–Protein interactions for RNA: ENST00000561978.1

PCAT1-202, prostate cancer associated transcript 1, humanhuman

TSL 1 (best) BASIC

Gene PCAT1, Length 1,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT1-202ENST00000561978 FXYD7P58549 80 aa8.63□□□□□ -1.03
PCAT1-202ENST00000561978 FOXI2Q6ZQN5 318 aa8.63□□□□□ -1.03
PCAT1-202ENST00000561978 MCRIP2Q9BUT9 160 aaKnown RBP8.63□□□□□ -1.03
PCAT1-202ENST00000561978 NOTCH1P46531 2555 aa8.63□□□□□ -1.03
PCAT1-202ENST00000561978 A0A1W2PRX2 142 aa8.62□□□□□ -1.03
PCAT1-202ENST00000561978 KIR3DS1Q14943 382 aa8.62□□□□□ -1.03
PCAT1-202ENST00000561978 KHDC1LQ5JSQ8 128 aa8.62□□□□□ -1.03
PCAT1-202ENST00000561978 TRAV26-2A0A0B4J265 109 aa8.62□□□□□ -1.03
PCAT1-202ENST00000561978 TRAV12-3A0A0B4J271 114 aa8.62□□□□□ -1.03
PCAT1-202ENST00000561978 SMIM9A6NGZ8 99 aa8.62□□□□□ -1.03
PCAT1-202ENST00000561978 ORMDL2Q53FV1 153 aa8.62□□□□□ -1.03
PCAT1-202ENST00000561978 C14orf178Q8N769 122 aaPredicted RBP8.62□□□□□ -1.03
PCAT1-202ENST00000561978 POM121L12Q8N7R1 296 aa8.62□□□□□ -1.03
PCAT1-202ENST00000561978 GAGE12BA1L429 117 aa8.61□□□□□ -1.03
PCAT1-202ENST00000561978 PF4P02776 101 aa8.61□□□□□ -1.03
PCAT1-202ENST00000561978 CD7P09564 240 aa8.61□□□□□ -1.03
PCAT1-202ENST00000561978 COX8AP10176 69 aa8.61□□□□□ -1.03
PCAT1-202ENST00000561978 SUMO2P61956 95 aaKnown RBP8.61□□□□□ -1.03
PCAT1-202ENST00000561978 NSUN5P1Q3KNT7 163 aa8.61□□□□□ -1.03
PCAT1-202ENST00000561978 OR9G4Q8NGQ1 327 aa8.61□□□□□ -1.03
PCAT1-202ENST00000561978 SMIM2Q9BVW6 85 aa8.61□□□□□ -1.03
PCAT1-202ENST00000561978 PRSS1P07477 247 aa8.61□□□□□ -1.03
PCAT1-202ENST00000561978 SYT8Q8NBV8 401 aa8.61□□□□□ -1.03
PCAT1-202ENST00000561978 MRPL16Q9NX20 251 aaKnown RBP8.61□□□□□ -1.03
PCAT1-202ENST00000561978 ERG28Q9UKR5 140 aa8.61□□□□□ -1.03
PCAT1-202ENST00000561978 MGPP08493 103 aa8.6□□□□□ -1.03
PCAT1-202ENST00000561978 SLURP1P55000 103 aa8.6□□□□□ -1.03
PCAT1-202ENST00000561978 C18orf65Q6ZTR6 163 aa8.6□□□□□ -1.03
PCAT1-202ENST00000561978 RASL10AQ92737 203 aa8.6□□□□□ -1.03
PCAT1-202ENST00000561978 C18orf15Q96N68 181 aa8.6□□□□□ -1.03
PCAT1-202ENST00000561978 IGHV1OR15-1A0A075B7D0 117 aa8.59□□□□□ -1.03
PCAT1-202ENST00000561978 NUDT3O95989 172 aa8.59□□□□□ -1.03
PCAT1-202ENST00000561978 LINC01549A6NIU2 74 aa8.59□□□□□ -1.03
PCAT1-202ENST00000561978 ADARB2-AS1A8MUL3 147 aa8.59□□□□□ -1.03
PCAT1-202ENST00000561978 RS1O15537 224 aa8.59□□□□□ -1.03
PCAT1-202ENST00000561978 HINT1P49773 126 aaPredicted RBP8.59□□□□□ -1.03
PCAT1-202ENST00000561978 ADAMTSL5Q6ZMM2 481 aa8.59□□□□□ -1.03
PCAT1-202ENST00000561978 GTSF1LQ9H1H1 148 aa8.59□□□□□ -1.03
PCAT1-202ENST00000561978 ZMAT4Q9H898 229 aa8.59□□□□□ -1.03
PCAT1-202ENST00000561978 IGHV3-16A0A0C4DH30 117 aa8.58□□□□□ -1.04
PCAT1-202ENST00000561978 IGKV3-20P01619 116 aa8.58□□□□□ -1.04
PCAT1-202ENST00000561978 DEFB136Q30KP8 78 aa8.58□□□□□ -1.04
PCAT1-202ENST00000561978 KLHL30-AS1Q8NEE0 82 aa8.58□□□□□ -1.04
PCAT1-202ENST00000561978 C9orf85Q96MD7 179 aa8.58□□□□□ -1.04
PCAT1-202ENST00000561978 KIF25-AS1Q9Y6Z4 181 aa8.58□□□□□ -1.04
PCAT1-202ENST00000561978 TRGV11A0A075B6L2 103 aa8.57□□□□□ -1.04
PCAT1-202ENST00000561978 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.57□□□□□ -1.04
PCAT1-202ENST00000561978 SPINK13Q1W4C9 94 aa8.57□□□□□ -1.04
PCAT1-202ENST00000561978 DYNLRB2Q8TF09 96 aa8.57□□□□□ -1.04
PCAT1-202ENST00000561978 TRAV12-2A0A075B6T6 113 aa8.57□□□□□ -1.04
PCAT1-202ENST00000561978 SPRY2O43597 315 aa8.57□□□□□ -1.04
PCAT1-202ENST00000561978 IGKCP01834 107 aa8.57□□□□□ -1.04
PCAT1-202ENST00000561978 AMTNQ6UX39 209 aa8.57□□□□□ -1.04
PCAT1-202ENST00000561978 NDUFA11Q86Y39 141 aa8.57□□□□□ -1.04
PCAT1-202ENST00000561978 DKK2Q9UBU2 259 aa8.57□□□□□ -1.04
PCAT1-202ENST00000561978 A8MTW9 85 aa8.56□□□□□ -1.04
PCAT1-202ENST00000561978 DPM2O94777 84 aa8.56□□□□□ -1.04
PCAT1-202ENST00000561978 HLA-DRB4P13762 266 aa8.56□□□□□ -1.04
PCAT1-202ENST00000561978 LINC00315P59091 139 aa8.56□□□□□ -1.04
PCAT1-202ENST00000561978 DEFB131AP59861 70 aa8.56□□□□□ -1.04
PCAT1-202ENST00000561978 MRPL23Q16540 153 aaKnown RBP8.56□□□□□ -1.04
PCAT1-202ENST00000561978 Q8N1Y9 231 aa8.56□□□□□ -1.04
PCAT1-202ENST00000561978 DLX4Q92988 240 aaPredicted RBP8.56□□□□□ -1.04
PCAT1-202ENST00000561978 TOMM6Q96B49 74 aa8.56□□□□□ -1.04
PCAT1-202ENST00000561978 DUX3Q96PT4 197 aa8.56□□□□□ -1.04
PCAT1-202ENST00000561978 HLA-DRB4X5D2U9 266 aa8.56□□□□□ -1.04
PCAT1-202ENST00000561978 F5H768 121 aa8.55□□□□□ -1.04
PCAT1-202ENST00000561978 CD300EQ496F6 205 aaPredicted RBP8.55□□□□□ -1.04
PCAT1-202ENST00000561978 NEGR1Q7Z3B1 354 aa8.55□□□□□ -1.04
PCAT1-202ENST00000561978 RPL39LQ96EH5 51 aaKnown RBP8.55□□□□□ -1.04
PCAT1-202ENST00000561978 SPATA25Q9BR10 227 aa8.55□□□□□ -1.04
PCAT1-202ENST00000561978 PPDPFQ9H3Y8 114 aa8.55□□□□□ -1.04
PCAT1-202ENST00000561978 TRAV12-1A0A0B4J245 112 aa8.55□□□□□ -1.04
PCAT1-202ENST00000561978 H3BMM0 161 aa8.55□□□□□ -1.04
PCAT1-202ENST00000561978 VCYO14598 125 aa8.55□□□□□ -1.04
PCAT1-202ENST00000561978 HSD52Q0P140 79 aa8.55□□□□□ -1.04
PCAT1-202ENST00000561978 DEFB114Q30KQ6 69 aa8.55□□□□□ -1.04
PCAT1-202ENST00000561978 MPV17L2Q567V2 206 aa8.55□□□□□ -1.04
PCAT1-202ENST00000561978 GTF2H5Q6ZYL4 71 aa8.55□□□□□ -1.04
PCAT1-202ENST00000561978 SCGB3A1Q96QR1 104 aa8.55□□□□□ -1.04
PCAT1-202ENST00000561978 C1orf43Q9BWL3 253 aa8.55□□□□□ -1.04
PCAT1-202ENST00000561978 MDFICQ9P1T7 246 aa8.55□□□□□ -1.04
PCAT1-202ENST00000561978 MUC4Q99102 2169 aa8.55□□□□□ -1.04
PCAT1-202ENST00000561978 A0A087WX48 190 aa8.54□□□□□ -1.04
PCAT1-202ENST00000561978 F5H697 171 aa8.54□□□□□ -1.04
PCAT1-202ENST00000561978 TMEM61Q8N0U2 210 aa8.54□□□□□ -1.04
PCAT1-202ENST00000561978 SPAG8Q99932 426 aaPredicted RBP8.54□□□□□ -1.04
PCAT1-202ENST00000561978 TRBV6-5A0A0K0K1A5 114 aa8.53□□□□□ -1.04
PCAT1-202ENST00000561978 PLNP26678 52 aa8.53□□□□□ -1.04
PCAT1-202ENST00000561978 SUMO4Q6EEV6 95 aa8.53□□□□□ -1.04
PCAT1-202ENST00000561978 KIR2DL4Q99706 377 aa8.53□□□□□ -1.04
PCAT1-202ENST00000561978 HHLA3Q9XRX5 114 aa8.53□□□□□ -1.04
PCAT1-202ENST00000561978 KNCNA6PVL3 124 aa8.53□□□□□ -1.04
PCAT1-202ENST00000561978 H7C1H1 209 aa8.53□□□□□ -1.04
PCAT1-202ENST00000561978 FGF6P10767 208 aa8.53□□□□□ -1.04
PCAT1-202ENST00000561978 POLR2KP53803 58 aaKnown RBP8.53□□□□□ -1.04
PCAT1-202ENST00000561978 BVES-AS1Q5T3Y7 98 aa8.53□□□□□ -1.04
PCAT1-202ENST00000561978 A0A087WWL8 130 aa8.52□□□□□ -1.05
PCAT1-202ENST00000561978 NMUP48645 174 aa8.52□□□□□ -1.05
PCAT1-202ENST00000561978 C2orf66Q6UXQ4 117 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms