RNA–Protein interactions for RNA: ENST00000560970.5

TPM1-227, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-227ENST00000560970 GFRA4Q9GZZ7 299 aa7.33□□□□□ -1.24
TPM1-227ENST00000560970 ICOSQ9Y6W8 199 aa7.33□□□□□ -1.24
TPM1-227ENST00000560970 A8MWL6 223 aa7.32□□□□□ -1.24
TPM1-227ENST00000560970 K7EQD1 137 aa7.32□□□□□ -1.24
TPM1-227ENST00000560970 NXPH4O95158 308 aa7.32□□□□□ -1.24
TPM1-227ENST00000560970 GYPEP15421 78 aa7.32□□□□□ -1.24
TPM1-227ENST00000560970 SLAQ13239 276 aa7.32□□□□□ -1.24
TPM1-227ENST00000560970 UFSP1Q6NVU6 142 aa7.32□□□□□ -1.24
TPM1-227ENST00000560970 RASL11AQ6T310 242 aa7.32□□□□□ -1.24
TPM1-227ENST00000560970 SAMD10Q9BYL1 202 aa7.32□□□□□ -1.24
TPM1-227ENST00000560970 NAT8BQ9UHF3 227 aa7.32□□□□□ -1.24
TPM1-227ENST00000560970 PHOX2AO14813 284 aa7.31□□□□□ -1.24
TPM1-227ENST00000560970 MT-ND6P03923 174 aa7.31□□□□□ -1.24
TPM1-227ENST00000560970 TRGC2P03986 189 aa7.31□□□□□ -1.24
TPM1-227ENST00000560970 S100A6P06703 90 aa7.31□□□□□ -1.24
TPM1-227ENST00000560970 WDR73Q6P4I2 378 aa7.31□□□□□ -1.24
TPM1-227ENST00000560970 Q6ZSN1 163 aa7.31□□□□□ -1.24
TPM1-227ENST00000560970 ATP5L2Q7Z4Y8 100 aa7.31□□□□□ -1.24
TPM1-227ENST00000560970 ZFP82Q8N141 532 aa7.31□□□□□ -1.24
TPM1-227ENST00000560970 FAT1Q14517 4588 aa7.31□□□□□ -1.24
TPM1-227ENST00000560970 MUC21A0A0G2JKD1 596 aa7.3□□□□□ -1.24
TPM1-227ENST00000560970 MUC21A0A140T8X8 626 aa7.3□□□□□ -1.24
TPM1-227ENST00000560970 M0R381 172 aa7.3□□□□□ -1.24
TPM1-227ENST00000560970 SNAI2O43623 268 aa7.3□□□□□ -1.24
TPM1-227ENST00000560970 GZMBP10144 247 aa7.3□□□□□ -1.24
TPM1-227ENST00000560970 PIK3CD-AS1Q5SR53 167 aa7.3□□□□□ -1.24
TPM1-227ENST00000560970 SLC25A29Q8N8R3 303 aa7.3□□□□□ -1.24
TPM1-227ENST00000560970 OR10AG1Q8NH19 301 aa7.3□□□□□ -1.24
TPM1-227ENST00000560970 GNB1LQ9BYB4 327 aa7.3□□□□□ -1.24
TPM1-227ENST00000560970 PHLDA3Q9Y5J5 127 aa7.3□□□□□ -1.24
TPM1-227ENST00000560970 MYCBP2O75592 4640 aa7.3□□□□□ -1.24
TPM1-227ENST00000560970 XKRY2A2RUG3 117 aa7.29□□□□□ -1.24
TPM1-227ENST00000560970 A8MWV9 139 aa7.29□□□□□ -1.24
TPM1-227ENST00000560970 HIST1H2BKO60814 126 aa7.29□□□□□ -1.24
TPM1-227ENST00000560970 HIST1H2BJP06899 126 aa7.29□□□□□ -1.24
TPM1-227ENST00000560970 HIST1H2BOP23527 126 aa7.29□□□□□ -1.24
TPM1-227ENST00000560970 HIST1H2BBP33778 126 aa7.29□□□□□ -1.24
TPM1-227ENST00000560970 HIST1H2BDP58876 126 aa7.29□□□□□ -1.24
TPM1-227ENST00000560970 RPS20P60866 119 aaKnown RBP7.29□□□□□ -1.24
TPM1-227ENST00000560970 HIST1H2BCP62807 126 aa7.29□□□□□ -1.24
TPM1-227ENST00000560970 MRPL23Q16540 153 aaKnown RBP7.29□□□□□ -1.24
TPM1-227ENST00000560970 HIST2H2BEQ16778 126 aa7.29□□□□□ -1.24
TPM1-227ENST00000560970 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.29□□□□□ -1.24
TPM1-227ENST00000560970 Q5VSD8 79 aa7.29□□□□□ -1.24
TPM1-227ENST00000560970 NFE4Q86UQ8 179 aa7.29□□□□□ -1.24
TPM1-227ENST00000560970 SYT8Q8NBV8 401 aa7.29□□□□□ -1.24
TPM1-227ENST00000560970 OR2D3Q8NGH3 330 aa7.29□□□□□ -1.24
TPM1-227ENST00000560970 HIST1H2BHQ93079 126 aa7.29□□□□□ -1.24
TPM1-227ENST00000560970 HIST1H2BNQ99877 126 aa7.29□□□□□ -1.24
TPM1-227ENST00000560970 HIST1H2BMQ99879 126 aa7.29□□□□□ -1.24
TPM1-227ENST00000560970 TRAPPC1Q9Y5R8 145 aa7.29□□□□□ -1.24
TPM1-227ENST00000560970 VPS13BQ7Z7G8 4022 aa7.29□□□□□ -1.24
TPM1-227ENST00000560970 A0A087WWL8 130 aa7.28□□□□□ -1.24
TPM1-227ENST00000560970 TRBV6-4A0A1B0GX49 114 aa7.28□□□□□ -1.24
TPM1-227ENST00000560970 C5orf52A6NGY3 159 aa7.28□□□□□ -1.24
TPM1-227ENST00000560970 HIGD1CA8MV81 97 aa7.28□□□□□ -1.24
TPM1-227ENST00000560970 HLA-DQA1P01909 254 aa7.28□□□□□ -1.24
TPM1-227ENST00000560970 CRYGDP07320 174 aa7.28□□□□□ -1.24
TPM1-227ENST00000560970 OR5AL1P0C617 328 aa7.28□□□□□ -1.24
TPM1-227ENST00000560970 TRGC1P0CF51 173 aa7.28□□□□□ -1.24
TPM1-227ENST00000560970 IGLC6P0CF74 106 aa7.28□□□□□ -1.24
TPM1-227ENST00000560970 DNAH10OSP0CZ25 163 aa7.28□□□□□ -1.24
TPM1-227ENST00000560970 LINC00694P0DN24 101 aa7.28□□□□□ -1.24
TPM1-227ENST00000560970 SRIP30626 198 aa7.28□□□□□ -1.24
TPM1-227ENST00000560970 FOXA3P55318 350 aaPredicted RBP7.28□□□□□ -1.24
TPM1-227ENST00000560970 RHOHQ15669 191 aa7.28□□□□□ -1.24
TPM1-227ENST00000560970 FAM74A4Q5TZK3 123 aa7.28□□□□□ -1.24
TPM1-227ENST00000560970 LYPD5Q6UWN5 251 aa7.28□□□□□ -1.24
TPM1-227ENST00000560970 ZFP2Q6ZN57 461 aa7.28□□□□□ -1.24
TPM1-227ENST00000560970 NEGR1Q7Z3B1 354 aa7.28□□□□□ -1.24
TPM1-227ENST00000560970 C14orf178Q8N769 122 aaPredicted RBP7.28□□□□□ -1.24
TPM1-227ENST00000560970 NUP35Q8NFH5 326 aa7.28□□□□□ -1.24
TPM1-227ENST00000560970 FRZBQ92765 325 aa7.28□□□□□ -1.24
TPM1-227ENST00000560970 SSBP4Q9BWG4 385 aaPredicted RBP7.28□□□□□ -1.24
TPM1-227ENST00000560970 Q9UF83 564 aa7.28□□□□□ -1.24
TPM1-227ENST00000560970 CIDEAO60543 219 aa7.27□□□□□ -1.25
TPM1-227ENST00000560970 INAFM2P0DMQ5 153 aa7.27□□□□□ -1.25
TPM1-227ENST00000560970 FUSP35637 526 aaKnown RBP eCLIP7.27□□□□□ -1.25
TPM1-227ENST00000560970 FABP9Q0Z7S8 132 aa7.27□□□□□ -1.25
TPM1-227ENST00000560970 TMEM136Q6ZRR5 245 aa7.27□□□□□ -1.25
TPM1-227ENST00000560970 GTSF1Q8WW33 167 aa7.27□□□□□ -1.25
TPM1-227ENST00000560970 A0A087WTM6 91 aa7.26□□□□□ -1.25
TPM1-227ENST00000560970 A0A1B0GW15 77 aa7.26□□□□□ -1.25
TPM1-227ENST00000560970 A0A1B0GXF2 115 aa7.26□□□□□ -1.25
TPM1-227ENST00000560970 RHODO00212 210 aa7.26□□□□□ -1.25
TPM1-227ENST00000560970 S100A8P05109 93 aa7.26□□□□□ -1.25
TPM1-227ENST00000560970 XGP55808 180 aa7.26□□□□□ -1.25
TPM1-227ENST00000560970 SSTP61278 116 aa7.26□□□□□ -1.25
TPM1-227ENST00000560970 HBBP68871 147 aa7.26□□□□□ -1.25
TPM1-227ENST00000560970 COA6Q5JTJ3 125 aaKnown RBP7.26□□□□□ -1.25
TPM1-227ENST00000560970 MRPL54Q6P161 138 aaKnown RBP7.26□□□□□ -1.25
TPM1-227ENST00000560970 WFDC10BQ8IUB3 73 aa7.26□□□□□ -1.25
TPM1-227ENST00000560970 FER1L6-AS1Q8NA97 138 aa7.26□□□□□ -1.25
TPM1-227ENST00000560970 PRADC1Q9BSG0 188 aa7.26□□□□□ -1.25
TPM1-227ENST00000560970 MRPL18Q9H0U6 180 aaKnown RBP7.26□□□□□ -1.25
TPM1-227ENST00000560970 TRAV9-2A0A087WT02 112 aa7.25□□□□□ -1.25
TPM1-227ENST00000560970 GAGE12JA6NER3 117 aa7.25□□□□□ -1.25
TPM1-227ENST00000560970 K7EP13 123 aa7.25□□□□□ -1.25
TPM1-227ENST00000560970 SMCPP49901 116 aaPredicted RBP7.25□□□□□ -1.25
TPM1-227ENST00000560970 NDUFA6P56556 154 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms