RNA–Protein interactions for RNA: ENST00000560861.1

SNX1-212, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-212ENST00000560861 SBSPONQ8IVN8 264 aa8.01□□□□□ -1.13
SNX1-212ENST00000560861 Q8N8P6 123 aa8.01□□□□□ -1.13
SNX1-212ENST00000560861 OR4C5Q8NGB2 326 aa8.01□□□□□ -1.13
SNX1-212ENST00000560861 PACRGQ96M98 296 aaPredicted RBP8.01□□□□□ -1.13
SNX1-212ENST00000560861 SMIM2Q9BVW6 85 aa8.01□□□□□ -1.13
SNX1-212ENST00000560861 MAP1LC3AQ9H492 121 aa8.01□□□□□ -1.13
SNX1-212ENST00000560861 DKK2Q9UBU2 259 aa8.01□□□□□ -1.13
SNX1-212ENST00000560861 A0A096LNJ9 63 aa8□□□□□ -1.13
SNX1-212ENST00000560861 IGHV3-73A0A0B4J1V6 119 aa8□□□□□ -1.13
SNX1-212ENST00000560861 LOC389332A0A1B0GUA5 103 aa8□□□□□ -1.13
SNX1-212ENST00000560861 SMCPP49901 116 aaPredicted RBP8□□□□□ -1.13
SNX1-212ENST00000560861 EMP1P54849 157 aa8□□□□□ -1.13
SNX1-212ENST00000560861 FAM222AQ5U5X8 452 aa8□□□□□ -1.13
SNX1-212ENST00000560861 RNASEKQ6P5S7 137 aaKnown RBP8□□□□□ -1.13
SNX1-212ENST00000560861 TM2D3Q9BRN9 247 aa8□□□□□ -1.13
SNX1-212ENST00000560861 NXT2Q9NPJ8 142 aaKnown RBP8□□□□□ -1.13
SNX1-212ENST00000560861 NIT2Q9NQR4 276 aa8□□□□□ -1.13
SNX1-212ENST00000560861 Q9UF83 564 aa8□□□□□ -1.13
SNX1-212ENST00000560861 CELA1Q9UNI1 258 aa8□□□□□ -1.13
SNX1-212ENST00000560861 H7C1H1 209 aa7.99□□□□□ -1.13
SNX1-212ENST00000560861 DEFB4AO15263 64 aa7.99□□□□□ -1.13
SNX1-212ENST00000560861 P0DMU3 169 aa7.99□□□□□ -1.13
SNX1-212ENST00000560861 FAM231AP0DMU4 169 aa7.99□□□□□ -1.13
SNX1-212ENST00000560861 FAM231CP0DMU5 169 aa7.99□□□□□ -1.13
SNX1-212ENST00000560861 FHL2Q14192 279 aa7.99□□□□□ -1.13
SNX1-212ENST00000560861 FA2HQ7L5A8 372 aa7.99□□□□□ -1.13
SNX1-212ENST00000560861 PRSS3P2Q8NHM4 247 aa7.99□□□□□ -1.13
SNX1-212ENST00000560861 TMEM70Q9BUB7 260 aa7.99□□□□□ -1.13
SNX1-212ENST00000560861 C11orf68Q9H3H3 251 aaKnown RBP7.99□□□□□ -1.13
SNX1-212ENST00000560861 TGP01266 2768 aa7.99□□□□□ -1.13
SNX1-212ENST00000560861 IGHV1-24A0A0C4DH33 117 aa7.98□□□□□ -1.13
SNX1-212ENST00000560861 TRBV27A0A0K0K1C4 114 aa7.98□□□□□ -1.13
SNX1-212ENST00000560861 PMCHP20382 165 aa7.98□□□□□ -1.13
SNX1-212ENST00000560861 FAM19A2Q8N3H0 131 aa7.98□□□□□ -1.13
SNX1-212ENST00000560861 NEXN-AS1Q8NBZ9 246 aa7.98□□□□□ -1.13
SNX1-212ENST00000560861 ST20Q9HBF5 79 aa7.98□□□□□ -1.13
SNX1-212ENST00000560861 AP5S1Q9NUS5 200 aa7.98□□□□□ -1.13
SNX1-212ENST00000560861 DNAH9Q9NYC9 4486 aa7.98□□□□□ -1.13
SNX1-212ENST00000560861 HUWE1Q7Z6Z7 4374 aaKnown RBP7.98□□□□□ -1.13
SNX1-212ENST00000560861 TRGV2A0A075B6R0 118 aa7.97□□□□□ -1.13
SNX1-212ENST00000560861 SDHAF1A6NFY7 115 aa7.97□□□□□ -1.13
SNX1-212ENST00000560861 HSBP1O75506 76 aa7.97□□□□□ -1.13
SNX1-212ENST00000560861 LINC00694P0DN24 101 aa7.97□□□□□ -1.13
SNX1-212ENST00000560861 FABP4P15090 132 aa7.97□□□□□ -1.13
SNX1-212ENST00000560861 S100A2P29034 98 aa7.97□□□□□ -1.13
SNX1-212ENST00000560861 TMEM18Q96B42 140 aa7.97□□□□□ -1.13
SNX1-212ENST00000560861 DNAJC30Q96LL9 226 aa7.97□□□□□ -1.13
SNX1-212ENST00000560861 STAB2Q8WWQ8 2551 aa7.96□□□□□ -1.13
SNX1-212ENST00000560861 TRBV10-1A0A0K0K1A3 114 aa7.96□□□□□ -1.14
SNX1-212ENST00000560861 TRBV6-4A0A1B0GX49 114 aa7.96□□□□□ -1.14
SNX1-212ENST00000560861 K7EQD1 137 aa7.96□□□□□ -1.14
SNX1-212ENST00000560861 DEFB130BP0DP73 79 aa7.96□□□□□ -1.14
SNX1-212ENST00000560861 DEFB130AP0DP74 79 aa7.96□□□□□ -1.14
SNX1-212ENST00000560861 AMTP48728 403 aa7.96□□□□□ -1.14
SNX1-212ENST00000560861 PMCHL1Q16048 86 aa7.96□□□□□ -1.14
SNX1-212ENST00000560861 NEGR1Q7Z3B1 354 aa7.96□□□□□ -1.14
SNX1-212ENST00000560861 SLC25A29Q8N8R3 303 aa7.96□□□□□ -1.14
SNX1-212ENST00000560861 SPATA25Q9BR10 227 aa7.96□□□□□ -1.14
SNX1-212ENST00000560861 TEX48A0A1B0GUV7 120 aa7.95□□□□□ -1.14
SNX1-212ENST00000560861 K7EMI3 77 aa7.95□□□□□ -1.14
SNX1-212ENST00000560861 VCYO14598 125 aa7.95□□□□□ -1.14
SNX1-212ENST00000560861 SPART-AS1P0CW21 52 aa7.95□□□□□ -1.14
SNX1-212ENST00000560861 OR10D4PQ8NGN7 298 aa7.95□□□□□ -1.14
SNX1-212ENST00000560861 TCAPO15273 167 aa7.94□□□□□ -1.14
SNX1-212ENST00000560861 TSHBP01222 138 aa7.94□□□□□ -1.14
SNX1-212ENST00000560861 FCER1GP30273 86 aa7.94□□□□□ -1.14
SNX1-212ENST00000560861 DEFA6Q01524 100 aa7.94□□□□□ -1.14
SNX1-212ENST00000560861 LAGE3Q14657 143 aa7.94□□□□□ -1.14
SNX1-212ENST00000560861 C12orf74Q32Q52 190 aa7.94□□□□□ -1.14
SNX1-212ENST00000560861 DEFB121Q5J5C9 76 aa7.94□□□□□ -1.14
SNX1-212ENST00000560861 LINC00173Q6ZV60 143 aa7.94□□□□□ -1.14
SNX1-212ENST00000560861 TRGV4A0A0C4DH28 118 aa7.93□□□□□ -1.14
SNX1-212ENST00000560861 J3QL48 77 aa7.93□□□□□ -1.14
SNX1-212ENST00000560861 HBDP02042 147 aa7.93□□□□□ -1.14
SNX1-212ENST00000560861 CRYBA4P53673 196 aa7.93□□□□□ -1.14
SNX1-212ENST00000560861 UBE2D3P61077 147 aa7.93□□□□□ -1.14
SNX1-212ENST00000560861 DAD1P61803 113 aa7.93□□□□□ -1.14
SNX1-212ENST00000560861 UBE2D2P62837 147 aa7.93□□□□□ -1.14
SNX1-212ENST00000560861 RHOHQ15669 191 aa7.93□□□□□ -1.14
SNX1-212ENST00000560861 TRBV7-3A0A075B6L6 115 aa7.92□□□□□ -1.14
SNX1-212ENST00000560861 LOC100131303A0A0U1RQF7 123 aa7.92□□□□□ -1.14
SNX1-212ENST00000560861 I3L3M4 83 aa7.92□□□□□ -1.14
SNX1-212ENST00000560861 ATP5G1P05496 136 aa7.92□□□□□ -1.14
SNX1-212ENST00000560861 AKR1D1P51857 326 aa7.92□□□□□ -1.14
SNX1-212ENST00000560861 ORMDL2Q53FV1 153 aa7.92□□□□□ -1.14
SNX1-212ENST00000560861 Q8N976 141 aa7.92□□□□□ -1.14
SNX1-212ENST00000560861 MRAPQ8TCY5 172 aa7.92□□□□□ -1.14
SNX1-212ENST00000560861 B9D2Q9BPU9 175 aa7.92□□□□□ -1.14
SNX1-212ENST00000560861 TNFRSF18Q9Y5U5 241 aa7.92□□□□□ -1.14
SNX1-212ENST00000560861 A0A0J9YWU9 116 aa7.91□□□□□ -1.14
SNX1-212ENST00000560861 LCE2AQ5TA79 106 aaPredicted RBP7.91□□□□□ -1.14
SNX1-212ENST00000560861 ZNRF2Q8NHG8 242 aa7.91□□□□□ -1.14
SNX1-212ENST00000560861 VSIG2Q96IQ7 327 aa7.91□□□□□ -1.14
SNX1-212ENST00000560861 PRO0255Q9UI72 69 aa7.91□□□□□ -1.14
SNX1-212ENST00000560861 HHLA3Q9XRX5 114 aa7.91□□□□□ -1.14
SNX1-212ENST00000560861 GAGE12JA6NER3 117 aa7.9□□□□□ -1.14
SNX1-212ENST00000560861 LEPROTL1O95214 131 aa7.9□□□□□ -1.14
SNX1-212ENST00000560861 C3orf79P0CE67 100 aa7.9□□□□□ -1.14
SNX1-212ENST00000560861 RPL36AP83881 106 aaKnown RBP7.9□□□□□ -1.14
SNX1-212ENST00000560861 GAGE1Q13065 139 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 147.3 ms