RNA–Protein interactions for RNA: ENST00000559941.1

CHRNA3-207, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 592 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-207ENST00000559941 BAALCQ8WXS3 180 aa13.5□□□□□ -0.25
CHRNA3-207ENST00000559941 AP1S3Q96PC3 154 aa13.5□□□□□ -0.25
CHRNA3-207ENST00000559941 IGKV2D-24A0A075B6R9 120 aa13.49□□□□□ -0.25
CHRNA3-207ENST00000559941 IGLC6P0CF74 106 aa13.49□□□□□ -0.25
CHRNA3-207ENST00000559941 SMIM17P0DL12 118 aa13.49□□□□□ -0.25
CHRNA3-207ENST00000559941 GZMBP10144 247 aa13.49□□□□□ -0.25
CHRNA3-207ENST00000559941 GNG4P50150 75 aa13.49□□□□□ -0.25
CHRNA3-207ENST00000559941 HAMPP81172 84 aa13.49□□□□□ -0.25
CHRNA3-207ENST00000559941 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.49□□□□□ -0.25
CHRNA3-207ENST00000559941 FER1L6-AS1Q8NA97 138 aa13.49□□□□□ -0.25
CHRNA3-207ENST00000559941 OR2D3Q8NGH3 330 aa13.49□□□□□ -0.25
CHRNA3-207ENST00000559941 FAM30AQ9NZY2 134 aa13.49□□□□□ -0.25
CHRNA3-207ENST00000559941 RBFOX3A6NFN3 312 aa13.48□□□□□ -0.25
CHRNA3-207ENST00000559941 TMEM262E9PQX1 116 aa13.48□□□□□ -0.25
CHRNA3-207ENST00000559941 INAFM2P0DMQ5 153 aa13.48□□□□□ -0.25
CHRNA3-207ENST00000559941 Q0VG73 95 aa13.48□□□□□ -0.25
CHRNA3-207ENST00000559941 ATRAIDQ6UW56 229 aa13.48□□□□□ -0.25
CHRNA3-207ENST00000559941 MED9Q9NWA0 146 aa13.48□□□□□ -0.25
CHRNA3-207ENST00000559941 VAX2Q9UIW0 290 aa13.48□□□□□ -0.25
CHRNA3-207ENST00000559941 BCL2P10415 239 aa13.47□□□□□ -0.25
CHRNA3-207ENST00000559941 TRBV20OR9-2A0A075B6H5 130 aa13.46□□□□□ -0.25
CHRNA3-207ENST00000559941 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.46□□□□□ -0.25
CHRNA3-207ENST00000559941 CACNG7P62955 275 aa13.46□□□□□ -0.25
CHRNA3-207ENST00000559941 TMEM97Q5BJF2 176 aa13.46□□□□□ -0.25
CHRNA3-207ENST00000559941 Q6ZNX1 250 aa13.46□□□□□ -0.25
CHRNA3-207ENST00000559941 Q8N976 141 aa13.46□□□□□ -0.25
CHRNA3-207ENST00000559941 TPPP3Q9BW30 176 aa13.46□□□□□ -0.25
CHRNA3-207ENST00000559941 BIN3Q9NQY0 253 aa13.46□□□□□ -0.25
CHRNA3-207ENST00000559941 SRRM2Q9UQ35 2752 aaKnown RBP13.46□□□□□ -0.26
CHRNA3-207ENST00000559941 XKRY2A2RUG3 117 aa13.45□□□□□ -0.26
CHRNA3-207ENST00000559941 FAM229AH3BQW9 127 aa13.45□□□□□ -0.26
CHRNA3-207ENST00000559941 P01737 135 aa13.45□□□□□ -0.26
CHRNA3-207ENST00000559941 MPV17L2Q567V2 206 aa13.45□□□□□ -0.26
CHRNA3-207ENST00000559941 NTM-AS1Q6ZSK4 140 aa13.45□□□□□ -0.26
CHRNA3-207ENST00000559941 F2Z2F3 143 aa13.44□□□□□ -0.26
CHRNA3-207ENST00000559941 TAGLN2P37802 199 aaKnown RBP13.44□□□□□ -0.26
CHRNA3-207ENST00000559941 PKIAP61925 76 aa13.44□□□□□ -0.26
CHRNA3-207ENST00000559941 ENHOQ6UWT2 76 aa13.44□□□□□ -0.26
CHRNA3-207ENST00000559941 Q6ZSA8 131 aa13.44□□□□□ -0.26
CHRNA3-207ENST00000559941 CHCHD5Q9BSY4 110 aa13.44□□□□□ -0.26
CHRNA3-207ENST00000559941 C15orf54Q8N8G6 183 aa13.43□□□□□ -0.26
CHRNA3-207ENST00000559941 H7C1H1 209 aa13.42□□□□□ -0.26
CHRNA3-207ENST00000559941 M0QY20 66 aa13.42□□□□□ -0.26
CHRNA3-207ENST00000559941 CRPP02741 224 aa13.42□□□□□ -0.26
CHRNA3-207ENST00000559941 MGPP08493 103 aa13.42□□□□□ -0.26
CHRNA3-207ENST00000559941 C1orf43Q9BWL3 253 aa13.42□□□□□ -0.26
CHRNA3-207ENST00000559941 ANGP03950 147 aaKnown RBP13.41□□□□□ -0.26
CHRNA3-207ENST00000559941 SUMO4Q6EEV6 95 aa13.41□□□□□ -0.26
CHRNA3-207ENST00000559941 LYZL1Q6UWQ5 148 aa13.41□□□□□ -0.26
CHRNA3-207ENST00000559941 C9orf62Q8N4C0 152 aa13.41□□□□□ -0.26
CHRNA3-207ENST00000559941 NUDT10Q8NFP7 164 aa13.41□□□□□ -0.26
CHRNA3-207ENST00000559941 NUDT11Q96G61 164 aa13.41□□□□□ -0.26
CHRNA3-207ENST00000559941 TRBV25-1A0A075B6N4 114 aa13.4□□□□□ -0.26
CHRNA3-207ENST00000559941 TRGC1P0CF51 173 aa13.4□□□□□ -0.26
CHRNA3-207ENST00000559941 FLG2Q5D862 2391 aaPredicted RBP13.4□□□□□ -0.26
CHRNA3-207ENST00000559941 NTF3P20783 257 aa13.39□□□□□ -0.27
CHRNA3-207ENST00000559941 IQCJQ1A5X6 159 aa13.39□□□□□ -0.27
CHRNA3-207ENST00000559941 WDR73Q6P4I2 378 aa13.39□□□□□ -0.27
CHRNA3-207ENST00000559941 AKAP14Q86UN6 197 aa13.39□□□□□ -0.27
CHRNA3-207ENST00000559941 DMBT1Q9UGM3 2413 aaPredicted RBP13.38□□□□□ -0.27
CHRNA3-207ENST00000559941 RBX1P62877 108 aa13.38□□□□□ -0.27
CHRNA3-207ENST00000559941 GAGE6Q13070 117 aa13.38□□□□□ -0.27
CHRNA3-207ENST00000559941 MIAQ16674 131 aa13.38□□□□□ -0.27
CHRNA3-207ENST00000559941 LINC01620Q4KN68 170 aa13.38□□□□□ -0.27
CHRNA3-207ENST00000559941 DPH3P1Q9H4G8 78 aa13.38□□□□□ -0.27
CHRNA3-207ENST00000559941 IGHV1-24A0A0C4DH33 117 aa13.37□□□□□ -0.27
CHRNA3-207ENST00000559941 C14orf177Q52M58 125 aa13.37□□□□□ -0.27
CHRNA3-207ENST00000559941 RASL11AQ6T310 242 aa13.37□□□□□ -0.27
CHRNA3-207ENST00000559941 OCC1Q8TAD7 63 aa13.37□□□□□ -0.27
CHRNA3-207ENST00000559941 PRR34Q9NV39 138 aa13.37□□□□□ -0.27
CHRNA3-207ENST00000559941 MYCBP2O75592 4640 aa13.36□□□□□ -0.27
CHRNA3-207ENST00000559941 K7EN84 100 aa13.36□□□□□ -0.27
CHRNA3-207ENST00000559941 CTRLP40313 264 aa13.36□□□□□ -0.27
CHRNA3-207ENST00000559941 BLOC1S1P78537 153 aa13.36□□□□□ -0.27
CHRNA3-207ENST00000559941 CNFNQ9BYD5 112 aa13.36□□□□□ -0.27
CHRNA3-207ENST00000559941 HERC1Q15751 4861 aa13.36□□□□□ -0.27
CHRNA3-207ENST00000559941 NKX2-5P52952 324 aaPredicted RBP13.35□□□□□ -0.27
CHRNA3-207ENST00000559941 RNASE7Q9H1E1 156 aaKnown RBP13.35□□□□□ -0.27
CHRNA3-207ENST00000559941 RPP21Q9H633 154 aaKnown RBP13.35□□□□□ -0.27
CHRNA3-207ENST00000559941 NIT2Q9NQR4 276 aa13.35□□□□□ -0.27
CHRNA3-207ENST00000559941 ALKAL2Q6UX46 152 aa13.34□□□□□ -0.27
CHRNA3-207ENST00000559941 LINC00269Q8N2A0 174 aa13.34□□□□□ -0.27
CHRNA3-207ENST00000559941 hCG_2014768A0A024R1R8 64 aa13.33□□□□□ -0.28
CHRNA3-207ENST00000559941 TMEM250H0YL14 139 aa13.33□□□□□ -0.28
CHRNA3-207ENST00000559941 TWIST1Q15672 202 aa13.33□□□□□ -0.28
CHRNA3-207ENST00000559941 LYPD6BQ8NI32 183 aa13.33□□□□□ -0.28
CHRNA3-207ENST00000559941 HLA-DQA1P01909 254 aa13.32□□□□□ -0.28
CHRNA3-207ENST00000559941 KRTAP26-1Q6PEX3 210 aa13.32□□□□□ -0.28
CHRNA3-207ENST00000559941 CLPSL2Q6UWE3 100 aa13.32□□□□□ -0.28
CHRNA3-207ENST00000559941 PGLYRP4Q96LB8 373 aa13.32□□□□□ -0.28
CHRNA3-207ENST00000559941 USP17L23D6RBM5 183 aa13.31□□□□□ -0.28
CHRNA3-207ENST00000559941 SCXQ7RTU7 201 aa13.31□□□□□ -0.28
CHRNA3-207ENST00000559941 LINC00528Q8N1L1 170 aa13.31□□□□□ -0.28
CHRNA3-207ENST00000559941 TMEM243Q9BU79 118 aa13.31□□□□□ -0.28
CHRNA3-207ENST00000559941 A0A1B0GUV1 79 aa13.3□□□□□ -0.28
CHRNA3-207ENST00000559941 C20orf203Q8NBC4 194 aa13.3□□□□□ -0.28
CHRNA3-207ENST00000559941 CHAC1Q9BUX1 264 aa13.3□□□□□ -0.28
CHRNA3-207ENST00000559941 PLA2G1BP04054 148 aaKnown RBP13.29□□□□□ -0.28
CHRNA3-207ENST00000559941 REG3AQ06141 175 aa13.29□□□□□ -0.28
CHRNA3-207ENST00000559941 FAM231DQ6ZW35 169 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms