RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 NEXN-AS1Q8NBZ9 246 aa7.33□□□□□ -1.24
TPM1-221ENST00000559831 ALKBH7Q9BT30 221 aaPredicted RBP7.33□□□□□ -1.24
TPM1-221ENST00000559831 Q9UF83 564 aa7.33□□□□□ -1.24
TPM1-221ENST00000559831 PRO0255Q9UI72 69 aa7.33□□□□□ -1.24
TPM1-221ENST00000559831 LOC389332A0A1B0GUA5 103 aa7.32□□□□□ -1.24
TPM1-221ENST00000559831 GAGE12JA6NER3 117 aa7.32□□□□□ -1.24
TPM1-221ENST00000559831 C1orf196B1AJZ1 125 aa7.32□□□□□ -1.24
TPM1-221ENST00000559831 GYPEP15421 78 aa7.32□□□□□ -1.24
TPM1-221ENST00000559831 GAGE1Q13065 139 aa7.32□□□□□ -1.24
TPM1-221ENST00000559831 GAGE4Q13068 117 aa7.32□□□□□ -1.24
TPM1-221ENST00000559831 GAGE5Q13069 117 aa7.32□□□□□ -1.24
TPM1-221ENST00000559831 GAGE13Q4V321 117 aa7.32□□□□□ -1.24
TPM1-221ENST00000559831 ZNRF2Q8NHG8 242 aa7.32□□□□□ -1.24
TPM1-221ENST00000559831 ST20Q9HBF5 79 aa7.32□□□□□ -1.24
TPM1-221ENST00000559831 NIT2Q9NQR4 276 aa7.32□□□□□ -1.24
TPM1-221ENST00000559831 TNFRSF18Q9Y5U5 241 aa7.32□□□□□ -1.24
TPM1-221ENST00000559831 TRBV10-1A0A0K0K1A3 114 aa7.31□□□□□ -1.24
TPM1-221ENST00000559831 PHOX2AO14813 284 aa7.31□□□□□ -1.24
TPM1-221ENST00000559831 PPP1R17O96001 155 aa7.31□□□□□ -1.24
TPM1-221ENST00000559831 RPL36AP83881 106 aaKnown RBP7.31□□□□□ -1.24
TPM1-221ENST00000559831 IQCJQ1A5X6 159 aa7.31□□□□□ -1.24
TPM1-221ENST00000559831 PHLDA1Q8WV24 401 aaPredicted RBP7.31□□□□□ -1.24
TPM1-221ENST00000559831 RPL36ALQ969Q0 106 aaKnown RBP7.31□□□□□ -1.24
TPM1-221ENST00000559831 VSIG2Q96IQ7 327 aa7.31□□□□□ -1.24
TPM1-221ENST00000559831 DNAJC30Q96LL9 226 aa7.31□□□□□ -1.24
TPM1-221ENST00000559831 MAP1LC3AQ9H492 121 aa7.31□□□□□ -1.24
TPM1-221ENST00000559831 LAMTOR2Q9Y2Q5 125 aa7.31□□□□□ -1.24
TPM1-221ENST00000559831 COL7A1Q02388 2944 aa7.3□□□□□ -1.24
TPM1-221ENST00000559831 IGHV3-38A0A0C4DH36 116 aa7.3□□□□□ -1.24
TPM1-221ENST00000559831 SUMO2P61956 95 aaKnown RBP7.3□□□□□ -1.24
TPM1-221ENST00000559831 NEGR1Q7Z3B1 354 aa7.3□□□□□ -1.24
TPM1-221ENST00000559831 TRBV7-3A0A075B6L6 115 aa7.29□□□□□ -1.24
TPM1-221ENST00000559831 A0A096LPF7 62 aa7.29□□□□□ -1.24
TPM1-221ENST00000559831 TRBV6-5A0A0K0K1A5 114 aa7.29□□□□□ -1.24
TPM1-221ENST00000559831 SDHAF1A6NFY7 115 aa7.29□□□□□ -1.24
TPM1-221ENST00000559831 HIST1H2BKO60814 126 aa7.29□□□□□ -1.24
TPM1-221ENST00000559831 NUDT3O95989 172 aa7.29□□□□□ -1.24
TPM1-221ENST00000559831 HIST1H2BJP06899 126 aa7.29□□□□□ -1.24
TPM1-221ENST00000559831 HIST1H2BOP23527 126 aa7.29□□□□□ -1.24
TPM1-221ENST00000559831 HIST1H2BBP33778 126 aa7.29□□□□□ -1.24
TPM1-221ENST00000559831 HIST1H2BDP58876 126 aa7.29□□□□□ -1.24
TPM1-221ENST00000559831 RAB5BP61020 215 aa7.29□□□□□ -1.24
TPM1-221ENST00000559831 HIST1H2BCP62807 126 aa7.29□□□□□ -1.24
TPM1-221ENST00000559831 HIST2H2BEQ16778 126 aa7.29□□□□□ -1.24
TPM1-221ENST00000559831 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.29□□□□□ -1.24
TPM1-221ENST00000559831 C18orf32Q8TCD1 76 aa7.29□□□□□ -1.24
TPM1-221ENST00000559831 DEFB104AQ8WTQ1 72 aa7.29□□□□□ -1.24
TPM1-221ENST00000559831 HIST1H2BHQ93079 126 aa7.29□□□□□ -1.24
TPM1-221ENST00000559831 HIST1H2BNQ99877 126 aa7.29□□□□□ -1.24
TPM1-221ENST00000559831 HIST1H2BMQ99879 126 aa7.29□□□□□ -1.24
TPM1-221ENST00000559831 C20orf78Q9BR46 151 aa7.29□□□□□ -1.24
TPM1-221ENST00000559831 ICOSQ9Y6W8 199 aa7.29□□□□□ -1.24
TPM1-221ENST00000559831 STAB2Q8WWQ8 2551 aa7.28□□□□□ -1.24
TPM1-221ENST00000559831 IGLL5B9A064 214 aa7.28□□□□□ -1.24
TPM1-221ENST00000559831 PMCHP20382 165 aa7.28□□□□□ -1.24
TPM1-221ENST00000559831 IFI27P40305 119 aaPredicted RBP7.28□□□□□ -1.24
TPM1-221ENST00000559831 UBE2D3P61077 147 aa7.28□□□□□ -1.24
TPM1-221ENST00000559831 UBE2D2P62837 147 aa7.28□□□□□ -1.24
TPM1-221ENST00000559831 BAGE3Q86Y29 109 aa7.28□□□□□ -1.24
TPM1-221ENST00000559831 PRSS3P2Q8NHM4 247 aa7.28□□□□□ -1.24
TPM1-221ENST00000559831 TMEM70Q9BUB7 260 aa7.28□□□□□ -1.24
TPM1-221ENST00000559831 SMIM2Q9BVW6 85 aa7.28□□□□□ -1.24
TPM1-221ENST00000559831 KRTAP3-3Q9BYR6 98 aa7.28□□□□□ -1.24
TPM1-221ENST00000559831 KRTAP3-2Q9BYR7 98 aa7.28□□□□□ -1.24
TPM1-221ENST00000559831 I3L3M4 83 aa7.27□□□□□ -1.25
TPM1-221ENST00000559831 VCYO14598 125 aa7.27□□□□□ -1.25
TPM1-221ENST00000559831 LINC00694P0DN24 101 aa7.27□□□□□ -1.25
TPM1-221ENST00000559831 POLR2KP53803 58 aaKnown RBP7.27□□□□□ -1.25
TPM1-221ENST00000559831 MRPL23Q16540 153 aaKnown RBP7.27□□□□□ -1.25
TPM1-221ENST00000559831 RNASEKQ6P5S7 137 aaKnown RBP7.27□□□□□ -1.25
TPM1-221ENST00000559831 FA2HQ7L5A8 372 aa7.27□□□□□ -1.25
TPM1-221ENST00000559831 Q8N8P6 123 aa7.27□□□□□ -1.25
TPM1-221ENST00000559831 ATP6V0E2Q8NHE4 81 aa7.27□□□□□ -1.25
TPM1-221ENST00000559831 TMA7Q9Y2S6 64 aaKnown RBP7.27□□□□□ -1.25
TPM1-221ENST00000559831 NUPR2A6NF83 97 aa7.26□□□□□ -1.25
TPM1-221ENST00000559831 H3BNG1 76 aa7.26□□□□□ -1.25
TPM1-221ENST00000559831 FCER1GP30273 86 aa7.26□□□□□ -1.25
TPM1-221ENST00000559831 NDUFA6P56556 154 aa7.26□□□□□ -1.25
TPM1-221ENST00000559831 ZFAND6Q6FIF0 208 aa7.26□□□□□ -1.25
TPM1-221ENST00000559831 CEMP1Q6PRD7 247 aaPredicted RBP7.26□□□□□ -1.25
TPM1-221ENST00000559831 DAZ4Q86SG3 579 aaKnown RBP7.26□□□□□ -1.25
TPM1-221ENST00000559831 NXT2Q9NPJ8 142 aaKnown RBP7.26□□□□□ -1.25
TPM1-221ENST00000559831 DAZ3Q9NR90 486 aaKnown RBP7.26□□□□□ -1.25
TPM1-221ENST00000559831 IGLV2-18A0A075B6J9 118 aa7.25□□□□□ -1.25
TPM1-221ENST00000559831 PRSS47A8MTI9 375 aa7.25□□□□□ -1.25
TPM1-221ENST00000559831 TCAPO15273 167 aa7.25□□□□□ -1.25
TPM1-221ENST00000559831 RPL32P62910 135 aaKnown RBP7.25□□□□□ -1.25
TPM1-221ENST00000559831 Q0VG73 95 aa7.25□□□□□ -1.25
TPM1-221ENST00000559831 COTL1Q14019 142 aa7.25□□□□□ -1.25
TPM1-221ENST00000559831 NIT1Q86X76 327 aa7.25□□□□□ -1.25
TPM1-221ENST00000559831 C15orf53Q8NAA6 179 aa7.25□□□□□ -1.25
TPM1-221ENST00000559831 WWC2-AS2Q96NR7 200 aa7.25□□□□□ -1.25
TPM1-221ENST00000559831 KIR2DL4Q99706 377 aa7.25□□□□□ -1.25
TPM1-221ENST00000559831 KLK5Q9Y337 293 aaPredicted RBP7.25□□□□□ -1.25
TPM1-221ENST00000559831 TRBV27A0A0K0K1C4 114 aa7.24□□□□□ -1.25
TPM1-221ENST00000559831 SERF1AO75920 110 aa7.24□□□□□ -1.25
TPM1-221ENST00000559831 TSHBP01222 138 aa7.24□□□□□ -1.25
TPM1-221ENST00000559831 SH2D6Q7Z4S9 175 aa7.24□□□□□ -1.25
TPM1-221ENST00000559831 MUC7Q8TAX7 377 aa7.24□□□□□ -1.25
TPM1-221ENST00000559831 URB1-AS1Q96HZ7 61 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 232.7 ms