RNA–Protein interactions for RNA: ENST00000559658.5

CHRNA3-206, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 1,889 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-206ENST00000559658 TM2D3Q9BRN9 247 aa12.27□□□□□ -0.45
CHRNA3-206ENST00000559658 IGLV2-18A0A075B6J9 118 aa12.26□□□□□ -0.45
CHRNA3-206ENST00000559658 RHODO00212 210 aa12.26□□□□□ -0.45
CHRNA3-206ENST00000559658 FAM19A2Q8N3H0 131 aa12.26□□□□□ -0.45
CHRNA3-206ENST00000559658 ZFP2Q6ZN57 461 aa12.25□□□□□ -0.45
CHRNA3-206ENST00000559658 MAP1LC3AQ9H492 121 aa12.25□□□□□ -0.45
CHRNA3-206ENST00000559658 LYRM9A8MSI8 78 aa12.25□□□□□ -0.45
CHRNA3-206ENST00000559658 SUMO2P61956 95 aaKnown RBP12.25□□□□□ -0.45
CHRNA3-206ENST00000559658 LAMTOR2Q9Y2Q5 125 aa12.25□□□□□ -0.45
CHRNA3-206ENST00000559658 A0A0J9YWU9 116 aa12.24□□□□□ -0.45
CHRNA3-206ENST00000559658 PMCHP20382 165 aa12.24□□□□□ -0.45
CHRNA3-206ENST00000559658 SLC25A29Q8N8R3 303 aa12.24□□□□□ -0.45
CHRNA3-206ENST00000559658 PRSS3P2Q8NHM4 247 aa12.24□□□□□ -0.45
CHRNA3-206ENST00000559658 LOC100131303A0A0U1RQF7 123 aa12.23□□□□□ -0.45
CHRNA3-206ENST00000559658 LINC00614P0C842 121 aa12.23□□□□□ -0.45
CHRNA3-206ENST00000559658 FHL2Q14192 279 aa12.23□□□□□ -0.45
CHRNA3-206ENST00000559658 NEXN-AS1Q8NBZ9 246 aa12.23□□□□□ -0.45
CHRNA3-206ENST00000559658 SPATA25Q9BR10 227 aa12.23□□□□□ -0.45
CHRNA3-206ENST00000559658 SMIM2Q9BVW6 85 aa12.23□□□□□ -0.45
CHRNA3-206ENST00000559658 TCAPO15273 167 aa12.23□□□□□ -0.45
CHRNA3-206ENST00000559658 ESDP10768 282 aa12.23□□□□□ -0.45
CHRNA3-206ENST00000559658 HIST1H2BLQ99880 126 aa12.23□□□□□ -0.45
CHRNA3-206ENST00000559658 EDA2RQ9HAV5 297 aa12.23□□□□□ -0.45
CHRNA3-206ENST00000559658 FABP4P15090 132 aa12.22□□□□□ -0.45
CHRNA3-206ENST00000559658 DAD1P61803 113 aa12.22□□□□□ -0.45
CHRNA3-206ENST00000559658 TMEM70Q9BUB7 260 aa12.22□□□□□ -0.45
CHRNA3-206ENST00000559658 A0A096LNJ9 63 aa12.21□□□□□ -0.45
CHRNA3-206ENST00000559658 IGHV1-24A0A0C4DH33 117 aa12.21□□□□□ -0.45
CHRNA3-206ENST00000559658 SDHAF1A6NFY7 115 aa12.21□□□□□ -0.45
CHRNA3-206ENST00000559658 FA2HQ7L5A8 372 aa12.21□□□□□ -0.45
CHRNA3-206ENST00000559658 C18orf15Q96N68 181 aa12.21□□□□□ -0.45
CHRNA3-206ENST00000559658 ST20Q9HBF5 79 aa12.21□□□□□ -0.45
CHRNA3-206ENST00000559658 NIT2Q9NQR4 276 aa12.21□□□□□ -0.45
CHRNA3-206ENST00000559658 STAB2Q8WWQ8 2551 aa12.21□□□□□ -0.46
CHRNA3-206ENST00000559658 TRGV4A0A0C4DH28 118 aa12.21□□□□□ -0.46
CHRNA3-206ENST00000559658 PRSS47A8MTI9 375 aa12.21□□□□□ -0.46
CHRNA3-206ENST00000559658 K7EQD1 137 aa12.21□□□□□ -0.46
CHRNA3-206ENST00000559658 SPART-AS1P0CW21 52 aa12.21□□□□□ -0.46
CHRNA3-206ENST00000559658 POLR2KP53803 58 aaKnown RBP12.21□□□□□ -0.46
CHRNA3-206ENST00000559658 C12orf74Q32Q52 190 aa12.21□□□□□ -0.46
CHRNA3-206ENST00000559658 Q8N8P6 123 aa12.21□□□□□ -0.46
CHRNA3-206ENST00000559658 C11orf68Q9H3H3 251 aaKnown RBP12.21□□□□□ -0.46
CHRNA3-206ENST00000559658 AP5S1Q9NUS5 200 aa12.21□□□□□ -0.46
CHRNA3-206ENST00000559658 TRBV6-5A0A0K0K1A5 114 aa12.2□□□□□ -0.46
CHRNA3-206ENST00000559658 HSBP1O75506 76 aa12.2□□□□□ -0.46
CHRNA3-206ENST00000559658 C20orf78Q9BR46 151 aa12.2□□□□□ -0.46
CHRNA3-206ENST00000559658 AMTP48728 403 aa12.19□□□□□ -0.46
CHRNA3-206ENST00000559658 DEFA6Q01524 100 aa12.19□□□□□ -0.46
CHRNA3-206ENST00000559658 CHCHD1Q96BP2 118 aaKnown RBP12.19□□□□□ -0.46
CHRNA3-206ENST00000559658 IGHV3-38A0A0C4DH36 116 aa12.19□□□□□ -0.46
CHRNA3-206ENST00000559658 H7C1H1 209 aa12.19□□□□□ -0.46
CHRNA3-206ENST00000559658 HTN3P15516 51 aa12.18□□□□□ -0.46
CHRNA3-206ENST00000559658 S100A2P29034 98 aa12.18□□□□□ -0.46
CHRNA3-206ENST00000559658 LINC00173Q6ZV60 143 aa12.18□□□□□ -0.46
CHRNA3-206ENST00000559658 PHLDA1Q8WV24 401 aaPredicted RBP12.18□□□□□ -0.46
CHRNA3-206ENST00000559658 NXT2Q9NPJ8 142 aaKnown RBP12.18□□□□□ -0.46
CHRNA3-206ENST00000559658 GAGE12JA6NER3 117 aa12.17□□□□□ -0.46
CHRNA3-206ENST00000559658 LINC01546A6NGU7 62 aa12.17□□□□□ -0.46
CHRNA3-206ENST00000559658 GAGE1Q13065 139 aa12.17□□□□□ -0.46
CHRNA3-206ENST00000559658 GAGE4Q13068 117 aa12.17□□□□□ -0.46
CHRNA3-206ENST00000559658 GAGE5Q13069 117 aa12.17□□□□□ -0.46
CHRNA3-206ENST00000559658 GAGE13Q4V321 117 aa12.17□□□□□ -0.46
CHRNA3-206ENST00000559658 ZNRF2Q8NHG8 242 aa12.17□□□□□ -0.46
CHRNA3-206ENST00000559658 PPP1R17O96001 155 aa12.17□□□□□ -0.46
CHRNA3-206ENST00000559658 NANOS2P60321 138 aaKnown RBP12.17□□□□□ -0.46
CHRNA3-206ENST00000559658 Q6ZTC4 211 aa12.17□□□□□ -0.46
CHRNA3-206ENST00000559658 B9D2Q9BPU9 175 aa12.17□□□□□ -0.46
CHRNA3-206ENST00000559658 TRBV27A0A0K0K1C4 114 aa12.16□□□□□ -0.46
CHRNA3-206ENST00000559658 TNFRSF18Q9Y5U5 241 aa12.16□□□□□ -0.46
CHRNA3-206ENST00000559658 A0A0J9YY99 117 aa12.15□□□□□ -0.46
CHRNA3-206ENST00000559658 TRBV6-4A0A1B0GX49 114 aa12.15□□□□□ -0.46
CHRNA3-206ENST00000559658 TSHBP01222 138 aa12.15□□□□□ -0.46
CHRNA3-206ENST00000559658 PACRGQ96M98 296 aaPredicted RBP12.15□□□□□ -0.46
CHRNA3-206ENST00000559658 HHLA3Q9XRX5 114 aa12.15□□□□□ -0.46
CHRNA3-206ENST00000559658 ATP5G1P05496 136 aa12.14□□□□□ -0.47
CHRNA3-206ENST00000559658 CRYBA4P53673 196 aa12.14□□□□□ -0.47
CHRNA3-206ENST00000559658 RPL32P62910 135 aaKnown RBP12.14□□□□□ -0.47
CHRNA3-206ENST00000559658 OR10D4PQ8NGN7 298 aa12.14□□□□□ -0.47
CHRNA3-206ENST00000559658 VSIG2Q96IQ7 327 aa12.14□□□□□ -0.47
CHRNA3-206ENST00000559658 AKR1D1P51857 326 aa12.14□□□□□ -0.47
CHRNA3-206ENST00000559658 TMEM18Q96B42 140 aa12.14□□□□□ -0.47
CHRNA3-206ENST00000559658 FBN3Q75N90 2809 aa12.13□□□□□ -0.47
CHRNA3-206ENST00000559658 TRBV7-3A0A075B6L6 115 aa12.13□□□□□ -0.47
CHRNA3-206ENST00000559658 F5H768 121 aa12.13□□□□□ -0.47
CHRNA3-206ENST00000559658 LAGE3Q14657 143 aa12.13□□□□□ -0.47
CHRNA3-206ENST00000559658 RHOHQ15669 191 aa12.13□□□□□ -0.47
CHRNA3-206ENST00000559658 TRBV10-1A0A0K0K1A3 114 aa12.12□□□□□ -0.47
CHRNA3-206ENST00000559658 VCYO14598 125 aa12.12□□□□□ -0.47
CHRNA3-206ENST00000559658 LINC00694P0DN24 101 aa12.12□□□□□ -0.47
CHRNA3-206ENST00000559658 UBE2D3P61077 147 aa12.12□□□□□ -0.47
CHRNA3-206ENST00000559658 UBE2D2P62837 147 aa12.12□□□□□ -0.47
CHRNA3-206ENST00000559658 ZMAT4Q9H898 229 aa12.12□□□□□ -0.47
CHRNA3-206ENST00000559658 TRAV26-1A0A087WT03 109 aa12.12□□□□□ -0.47
CHRNA3-206ENST00000559658 I3L3M4 83 aa12.12□□□□□ -0.47
CHRNA3-206ENST00000559658 CIDEAO60543 219 aa12.12□□□□□ -0.47
CHRNA3-206ENST00000559658 HBDP02042 147 aa12.11□□□□□ -0.47
CHRNA3-206ENST00000559658 GYPEP15421 78 aa12.11□□□□□ -0.47
CHRNA3-206ENST00000559658 BTF3P20290 206 aaKnown RBP12.11□□□□□ -0.47
CHRNA3-206ENST00000559658 RPL36AP83881 106 aaKnown RBP12.11□□□□□ -0.47
CHRNA3-206ENST00000559658 C11orf45Q8TAV5 145 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms