RNA–Protein interactions for RNA: ENST00000558989.1

SPG11-214, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 1,816 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-214ENST00000558989 RTL8CO15255 209 aa6.66□□□□□ -1.34
SPG11-214ENST00000558989 ASIPP42127 132 aa6.66□□□□□ -1.34
SPG11-214ENST00000558989 SULT1A2P50226 295 aa6.66□□□□□ -1.34
SPG11-214ENST00000558989 ZNF506Q5JVG8 444 aa6.66□□□□□ -1.34
SPG11-214ENST00000558989 EIF5AL1Q6IS14 154 aaKnown RBP6.66□□□□□ -1.34
SPG11-214ENST00000558989 Q9UF83 564 aa6.66□□□□□ -1.34
SPG11-214ENST00000558989 ZFP30Q9Y2G7 519 aa6.66□□□□□ -1.34
SPG11-214ENST00000558989 NBDYA0A0U1RRE5 68 aa6.65□□□□□ -1.34
SPG11-214ENST00000558989 LTAP01374 205 aa6.65□□□□□ -1.34
SPG11-214ENST00000558989 LINC00614P0C842 121 aa6.65□□□□□ -1.34
SPG11-214ENST00000558989 HNRNPA3P51991 378 aaKnown RBP6.65□□□□□ -1.34
SPG11-214ENST00000558989 FAM162BQ5T6X4 162 aa6.65□□□□□ -1.34
SPG11-214ENST00000558989 ALKAL2Q6UX46 152 aa6.65□□□□□ -1.34
SPG11-214ENST00000558989 Q6ZR54 194 aa6.65□□□□□ -1.34
SPG11-214ENST00000558989 MTURNQ8N3F0 131 aa6.65□□□□□ -1.34
SPG11-214ENST00000558989 PCNPQ8WW12 178 aaKnown RBP6.65□□□□□ -1.34
SPG11-214ENST00000558989 C9orf85Q96MD7 179 aa6.65□□□□□ -1.34
SPG11-214ENST00000558989 DERL1Q9BUN8 251 aa6.65□□□□□ -1.34
SPG11-214ENST00000558989 JPT2Q9H910 190 aa6.65□□□□□ -1.34
SPG11-214ENST00000558989 H3BNG1 76 aa6.64□□□□□ -1.35
SPG11-214ENST00000558989 K7EQD1 137 aa6.64□□□□□ -1.35
SPG11-214ENST00000558989 SRIP30626 198 aa6.64□□□□□ -1.35
SPG11-214ENST00000558989 C1orf134Q5TEV5 83 aa6.64□□□□□ -1.35
SPG11-214ENST00000558989 BAGE2Q86Y30 109 aa6.64□□□□□ -1.35
SPG11-214ENST00000558989 MUC21A0A0G2JKD1 596 aa6.64□□□□□ -1.35
SPG11-214ENST00000558989 MUC21A0A140T8X8 626 aa6.64□□□□□ -1.35
SPG11-214ENST00000558989 TINCRA0A1B0GVN0 87 aa6.64□□□□□ -1.35
SPG11-214ENST00000558989 KRBOX1C9JBD0 128 aa6.64□□□□□ -1.35
SPG11-214ENST00000558989 ARMS2P0C7Q2 107 aa6.64□□□□□ -1.35
SPG11-214ENST00000558989 RAB5CP51148 216 aa6.64□□□□□ -1.35
SPG11-214ENST00000558989 CFAP126Q5VTH2 177 aa6.64□□□□□ -1.35
SPG11-214ENST00000558989 MANBALQ9NQG1 85 aa6.64□□□□□ -1.35
SPG11-214ENST00000558989 M0R381 172 aa6.63□□□□□ -1.35
SPG11-214ENST00000558989 PPBPP02775 128 aa6.63□□□□□ -1.35
SPG11-214ENST00000558989 MGST1P10620 155 aaKnown RBP6.63□□□□□ -1.35
SPG11-214ENST00000558989 RPL35P42766 123 aaKnown RBP6.63□□□□□ -1.35
SPG11-214ENST00000558989 RBX1P62877 108 aa6.63□□□□□ -1.35
SPG11-214ENST00000558989 BLOC1S1P78537 153 aa6.63□□□□□ -1.35
SPG11-214ENST00000558989 FAM74A4Q5TZK3 123 aa6.63□□□□□ -1.35
SPG11-214ENST00000558989 LYPD5Q6UWN5 251 aa6.63□□□□□ -1.35
SPG11-214ENST00000558989 NEGR1Q7Z3B1 354 aa6.63□□□□□ -1.35
SPG11-214ENST00000558989 NIT1Q86X76 327 aa6.63□□□□□ -1.35
SPG11-214ENST00000558989 TCEAL7Q9BRU2 100 aa6.63□□□□□ -1.35
SPG11-214ENST00000558989 KRTAP1-5Q9BYS1 174 aa6.63□□□□□ -1.35
SPG11-214ENST00000558989 MRPS16Q9Y3D3 137 aaKnown RBP6.63□□□□□ -1.35
SPG11-214ENST00000558989 NXPH4O95158 308 aa6.62□□□□□ -1.35
SPG11-214ENST00000558989 Q6ZSN1 163 aa6.62□□□□□ -1.35
SPG11-214ENST00000558989 SLC25A29Q8N8R3 303 aa6.62□□□□□ -1.35
SPG11-214ENST00000558989 MLST8Q9BVC4 326 aa6.62□□□□□ -1.35
SPG11-214ENST00000558989 SAMD10Q9BYL1 202 aa6.62□□□□□ -1.35
SPG11-214ENST00000558989 PPDPFQ9H3Y8 114 aa6.62□□□□□ -1.35
SPG11-214ENST00000558989 PHLDA3Q9Y5J5 127 aa6.62□□□□□ -1.35
SPG11-214ENST00000558989 TRAV1-1A0A0B4J248 108 aa6.62□□□□□ -1.35
SPG11-214ENST00000558989 TRBV6-1A0A0K0K1D8 114 aa6.62□□□□□ -1.35
SPG11-214ENST00000558989 IFNA1P01562 189 aa6.62□□□□□ -1.35
SPG11-214ENST00000558989 MED9Q9NWA0 146 aa6.62□□□□□ -1.35
SPG11-214ENST00000558989 DNAH17Q9UFH2 4485 aa6.61□□□□□ -1.35
SPG11-214ENST00000558989 FAT2Q9NYQ8 4349 aa6.61□□□□□ -1.35
SPG11-214ENST00000558989 MEF2BQ02080 365 aaPredicted RBP6.61□□□□□ -1.35
SPG11-214ENST00000558989 CENPWQ5EE01 88 aa6.61□□□□□ -1.35
SPG11-214ENST00000558989 FAM19A5Q7Z5A7 132 aaPredicted RBP6.61□□□□□ -1.35
SPG11-214ENST00000558989 C6orf223Q8N319 242 aa6.61□□□□□ -1.35
SPG11-214ENST00000558989 NEXN-AS1Q8NBZ9 246 aa6.61□□□□□ -1.35
SPG11-214ENST00000558989 PARLQ9H300 379 aa6.61□□□□□ -1.35
SPG11-214ENST00000558989 IL36BQ9NZH7 164 aa6.61□□□□□ -1.35
SPG11-214ENST00000558989 BCL2P10415 239 aa6.6□□□□□ -1.35
SPG11-214ENST00000558989 SCGB1A1P11684 91 aa6.6□□□□□ -1.35
SPG11-214ENST00000558989 GAGE5Q13069 117 aa6.6□□□□□ -1.35
SPG11-214ENST00000558989 ZNF575Q86XF7 245 aa6.6□□□□□ -1.35
SPG11-214ENST00000558989 WFDC10BQ8IUB3 73 aa6.6□□□□□ -1.35
SPG11-214ENST00000558989 SYT8Q8NBV8 401 aa6.6□□□□□ -1.35
SPG11-214ENST00000558989 TXNDC17Q9BRA2 123 aa6.6□□□□□ -1.35
SPG11-214ENST00000558989 PRADC1Q9BSG0 188 aa6.6□□□□□ -1.35
SPG11-214ENST00000558989 UPK3BQ9BT76 320 aa6.6□□□□□ -1.35
SPG11-214ENST00000558989 MSRB1Q9NZV6 116 aa6.6□□□□□ -1.35
SPG11-214ENST00000558989 GZMBP10144 247 aa6.6□□□□□ -1.35
SPG11-214ENST00000558989 GNG4P50150 75 aa6.6□□□□□ -1.35
SPG11-214ENST00000558989 RHOHQ15669 191 aa6.6□□□□□ -1.35
SPG11-214ENST00000558989 C14orf178Q8N769 122 aaPredicted RBP6.6□□□□□ -1.35
SPG11-214ENST00000558989 SFRP2Q96HF1 295 aa6.6□□□□□ -1.35
SPG11-214ENST00000558989 A8MWV9 139 aa6.59□□□□□ -1.35
SPG11-214ENST00000558989 OR10AG1Q8NH19 301 aa6.59□□□□□ -1.35
SPG11-214ENST00000558989 C11orf52Q96A22 123 aa6.59□□□□□ -1.35
SPG11-214ENST00000558989 VAX2Q9UIW0 290 aa6.59□□□□□ -1.35
SPG11-214ENST00000558989 RPL32P62910 135 aaKnown RBP6.58□□□□□ -1.36
SPG11-214ENST00000558989 TTC32Q5I0X7 151 aa6.58□□□□□ -1.36
SPG11-214ENST00000558989 MAP1LC3AQ9H492 121 aa6.58□□□□□ -1.36
SPG11-214ENST00000558989 A0A1B0GVY2 172 aa6.57□□□□□ -1.36
SPG11-214ENST00000558989 TRBV6-4A0A1B0GX49 114 aa6.57□□□□□ -1.36
SPG11-214ENST00000558989 RBFOX3A6NFN3 312 aa6.57□□□□□ -1.36
SPG11-214ENST00000558989 SMKR1H3BMG3 65 aa6.57□□□□□ -1.36
SPG11-214ENST00000558989 PDE6DO43924 150 aa6.57□□□□□ -1.36
SPG11-214ENST00000558989 IGLV2-8P01709 118 aa6.57□□□□□ -1.36
SPG11-214ENST00000558989 LINC00315P59091 139 aa6.57□□□□□ -1.36
SPG11-214ENST00000558989 SPANXN1Q5VSR9 72 aa6.57□□□□□ -1.36
SPG11-214ENST00000558989 LY96Q9Y6Y9 160 aa6.57□□□□□ -1.36
SPG11-214ENST00000558989 HECTD4Q9Y4D8 3996 aa6.57□□□□□ -1.36
SPG11-214ENST00000558989 TRBV20OR9-2A0A075B6H5 130 aa6.57□□□□□ -1.36
SPG11-214ENST00000558989 OR5AL1P0C617 328 aa6.57□□□□□ -1.36
SPG11-214ENST00000558989 RAB5AP20339 215 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms