RNA–Protein interactions for RNA: ENST00000558924.1

SEC11A-206, Transcript of SEC11 homolog A, signal peptidase complex subunit, humanhuman

TSL 1 (best)

Gene SEC11A, Length 3,626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11A-206ENST00000558924 HELZ2Q9BYK8 2649 aaKnown RBP9.19□□□□□ -0.94
SEC11A-206ENST00000558924 TRBV7-3A0A075B6L6 115 aa9.19□□□□□ -0.94
SEC11A-206ENST00000558924 SPXQ9BT56 116 aa9.19□□□□□ -0.94
SEC11A-206ENST00000558924 ZNF625Q96I27 306 aaPredicted RBP9.19□□□□□ -0.94
SEC11A-206ENST00000558924 CLPSL1A2RUU4 121 aa9.18□□□□□ -0.94
SEC11A-206ENST00000558924 DEFB112Q30KQ8 113 aa9.18□□□□□ -0.94
SEC11A-206ENST00000558924 ZMAT4Q9H898 229 aa9.18□□□□□ -0.94
SEC11A-206ENST00000558924 PRM2P04554 102 aa9.18□□□□□ -0.94
SEC11A-206ENST00000558924 U3KQK5 164 aa9.18□□□□□ -0.94
SEC11A-206ENST00000558924 FLNBO75369 2602 aaKnown RBP9.18□□□□□ -0.94
SEC11A-206ENST00000558924 TRAV21A0A0B4J279 112 aa9.18□□□□□ -0.94
SEC11A-206ENST00000558924 ORMDL2Q53FV1 153 aa9.18□□□□□ -0.94
SEC11A-206ENST00000558924 PPDPFQ9H3Y8 114 aa9.18□□□□□ -0.94
SEC11A-206ENST00000558924 LGALS1P09382 135 aaKnown RBP9.17□□□□□ -0.94
SEC11A-206ENST00000558924 LYRM7Q5U5X0 104 aa9.17□□□□□ -0.94
SEC11A-206ENST00000558924 HIST2H2BCQ6DN03 193 aa9.17□□□□□ -0.94
SEC11A-206ENST00000558924 TRPT1Q86TN4 253 aaKnown RBP9.17□□□□□ -0.94
SEC11A-206ENST00000558924 DPH3P1Q9H4G8 78 aa9.17□□□□□ -0.94
SEC11A-206ENST00000558924 C11orf86A6NJI1 115 aa9.17□□□□□ -0.94
SEC11A-206ENST00000558924 GATD1Q8NB37 220 aa9.17□□□□□ -0.94
SEC11A-206ENST00000558924 NDUFV3P56181 108 aaKnown RBP9.17□□□□□ -0.94
SEC11A-206ENST00000558924 SPINK13Q1W4C9 94 aa9.17□□□□□ -0.94
SEC11A-206ENST00000558924 GAGE12JA6NER3 117 aa9.16□□□□□ -0.94
SEC11A-206ENST00000558924 GAGE7O76087 117 aa9.16□□□□□ -0.94
SEC11A-206ENST00000558924 GAGE12FP0CL80 117 aa9.16□□□□□ -0.94
SEC11A-206ENST00000558924 GAGE12GP0CL81 117 aa9.16□□□□□ -0.94
SEC11A-206ENST00000558924 GAGE12IP0CL82 117 aa9.16□□□□□ -0.94
SEC11A-206ENST00000558924 GAGE2BQ13066 116 aa9.16□□□□□ -0.94
SEC11A-206ENST00000558924 GAGE4Q13068 117 aa9.16□□□□□ -0.94
SEC11A-206ENST00000558924 GAGE2EQ4V326 116 aa9.16□□□□□ -0.94
SEC11A-206ENST00000558924 PPDPFLQ8WWR9 84 aa9.16□□□□□ -0.94
SEC11A-206ENST00000558924 GAGE2DQ9UEU5 116 aa9.16□□□□□ -0.94
SEC11A-206ENST00000558924 A8MWV9 139 aa9.16□□□□□ -0.94
SEC11A-206ENST00000558924 EBI3Q14213 229 aa9.16□□□□□ -0.94
SEC11A-206ENST00000558924 TEN1Q86WV5 123 aa9.16□□□□□ -0.94
SEC11A-206ENST00000558924 C10orf105Q8TEF2 133 aa9.16□□□□□ -0.94
SEC11A-206ENST00000558924 BAALCQ8WXS3 180 aa9.16□□□□□ -0.94
SEC11A-206ENST00000558924 IGKV3OR2-268A0A0C4DH90 116 aa9.16□□□□□ -0.94
SEC11A-206ENST00000558924 COX6B1P14854 86 aa9.16□□□□□ -0.94
SEC11A-206ENST00000558924 CEMP1Q6PRD7 247 aaPredicted RBP9.16□□□□□ -0.94
SEC11A-206ENST00000558924 RASL10AQ92737 203 aa9.16□□□□□ -0.94
SEC11A-206ENST00000558924 SDHAF1A6NFY7 115 aa9.15□□□□□ -0.94
SEC11A-206ENST00000558924 B4DSR2 109 aa9.15□□□□□ -0.94
SEC11A-206ENST00000558924 LINC01559Q495D7 138 aa9.15□□□□□ -0.94
SEC11A-206ENST00000558924 TTC32Q5I0X7 151 aa9.15□□□□□ -0.94
SEC11A-206ENST00000558924 NRACQ8N912 160 aa9.15□□□□□ -0.94
SEC11A-206ENST00000558924 FAM110AQ9BQ89 295 aa9.14□□□□□ -0.95
SEC11A-206ENST00000558924 ZNF876PQ49A33 203 aa9.14□□□□□ -0.95
SEC11A-206ENST00000558924 ZNF575Q86XF7 245 aa9.14□□□□□ -0.95
SEC11A-206ENST00000558924 DAND5Q8N907 189 aa9.14□□□□□ -0.95
SEC11A-206ENST00000558924 ITPR2Q14571 2701 aa9.14□□□□□ -0.95
SEC11A-206ENST00000558924 IGHV3-38A0A0C4DH36 116 aa9.14□□□□□ -0.95
SEC11A-206ENST00000558924 IGHV7-4-1A0A0J9YVY3 117 aa9.14□□□□□ -0.95
SEC11A-206ENST00000558924 C9orf139Q6ZV77 190 aa9.14□□□□□ -0.95
SEC11A-206ENST00000558924 PIFOQ8TCI5 191 aa9.13□□□□□ -0.95
SEC11A-206ENST00000558924 PRORYQ9H606 182 aa9.13□□□□□ -0.95
SEC11A-206ENST00000558924 DAZ1Q9NQZ3 744 aaKnown RBP9.13□□□□□ -0.95
SEC11A-206ENST00000558924 CITED1Q99966 193 aa9.13□□□□□ -0.95
SEC11A-206ENST00000558924 NBEAL2Q6ZNJ1 2754 aa9.13□□□□□ -0.95
SEC11A-206ENST00000558924 IGHV3-16A0A0C4DH30 117 aa9.13□□□□□ -0.95
SEC11A-206ENST00000558924 SNCGO76070 127 aa9.13□□□□□ -0.95
SEC11A-206ENST00000558924 NIPBLQ6KC79 2804 aaeCLIP9.12□□□□□ -0.95
SEC11A-206ENST00000558924 ZNF580Q9UK33 172 aa9.12□□□□□ -0.95
SEC11A-206ENST00000558924 RBAKDNA6NC62 111 aa9.12□□□□□ -0.95
SEC11A-206ENST00000558924 A8MZ25 164 aa9.12□□□□□ -0.95
SEC11A-206ENST00000558924 MEIG1Q5JSS6 88 aa9.12□□□□□ -0.95
SEC11A-206ENST00000558924 TRBV6-1A0A0K0K1D8 114 aa9.12□□□□□ -0.95
SEC11A-206ENST00000558924 FAM223BA6NKX1 122 aa9.12□□□□□ -0.95
SEC11A-206ENST00000558924 P0DMU3 169 aa9.12□□□□□ -0.95
SEC11A-206ENST00000558924 FAM231AP0DMU4 169 aa9.12□□□□□ -0.95
SEC11A-206ENST00000558924 FAM231CP0DMU5 169 aa9.12□□□□□ -0.95
SEC11A-206ENST00000558924 FAM223AQ8IWN6 122 aa9.12□□□□□ -0.95
SEC11A-206ENST00000558924 TEX49A0A1B0GTD5 131 aa9.11□□□□□ -0.95
SEC11A-206ENST00000558924 M0QXV9 152 aa9.11□□□□□ -0.95
SEC11A-206ENST00000558924 ELANEP08246 267 aa9.11□□□□□ -0.95
SEC11A-206ENST00000558924 NTN5Q8WTR8 489 aaPredicted RBP9.11□□□□□ -0.95
SEC11A-206ENST00000558924 CHCHD5Q9BSY4 110 aa9.11□□□□□ -0.95
SEC11A-206ENST00000558924 VCX2Q9H322 139 aa9.11□□□□□ -0.95
SEC11A-206ENST00000558924 A0A0J9YXV3 536 aa9.11□□□□□ -0.95
SEC11A-206ENST00000558924 A4D1N5 150 aa9.11□□□□□ -0.95
SEC11A-206ENST00000558924 RHODO00212 210 aa9.11□□□□□ -0.95
SEC11A-206ENST00000558924 DGAT2L7PQ6IED9 249 aa9.11□□□□□ -0.95
SEC11A-206ENST00000558924 MDFICQ9P1T7 246 aa9.11□□□□□ -0.95
SEC11A-206ENST00000558924 KRTAP10-9P60411 292 aa9.11□□□□□ -0.95
SEC11A-206ENST00000558924 MRPL23Q16540 153 aaKnown RBP9.11□□□□□ -0.95
SEC11A-206ENST00000558924 IFITM1P13164 125 aa9.1□□□□□ -0.95
SEC11A-206ENST00000558924 NDUFA4O00483 81 aa9.1□□□□□ -0.95
SEC11A-206ENST00000558924 TRAV8-3A0A0A6YYJ7 113 aa9.1□□□□□ -0.95
SEC11A-206ENST00000558924 LOC107984640A0A0U1RRK4 108 aa9.09□□□□□ -0.95
SEC11A-206ENST00000558924 J3QQQ9 107 aa9.09□□□□□ -0.95
SEC11A-206ENST00000558924 SNRPD3P62318 126 aaKnown RBP9.09□□□□□ -0.95
SEC11A-206ENST00000558924 TAL2Q16559 108 aa9.09□□□□□ -0.95
SEC11A-206ENST00000558924 SUMO4Q6EEV6 95 aa9.09□□□□□ -0.95
SEC11A-206ENST00000558924 C18orf65Q6ZTR6 163 aa9.09□□□□□ -0.95
SEC11A-206ENST00000558924 Q6ZSV7 163 aa9.09□□□□□ -0.95
SEC11A-206ENST00000558924 ATP6V0E2Q8NHE4 81 aa9.09□□□□□ -0.95
SEC11A-206ENST00000558924 OVOL1O14753 267 aa9.09□□□□□ -0.96
SEC11A-206ENST00000558924 SLC25A20O43772 301 aa9.09□□□□□ -0.96
SEC11A-206ENST00000558924 CD28P10747 220 aa9.09□□□□□ -0.96
SEC11A-206ENST00000558924 TNFRSF18Q9Y5U5 241 aa9.09□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms