RNA–Protein interactions for RNA: ENST00000558911.1

LRRC28-212, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-212ENST00000558911 SPINT4Q6UDR6 99 aa1.97□□□□□ -2.09
LRRC28-212ENST00000558911 Q6ZQT0 140 aa1.97□□□□□ -2.09
LRRC28-212ENST00000558911 TEN1Q86WV5 123 aa1.97□□□□□ -2.09
LRRC28-212ENST00000558911 LINC00311Q8N616 119 aa1.97□□□□□ -2.09
LRRC28-212ENST00000558911 CLEC2BQ92478 149 aa1.97□□□□□ -2.09
LRRC28-212ENST00000558911 POP5Q969H6 163 aaKnown RBP1.97□□□□□ -2.09
LRRC28-212ENST00000558911 BOKQ9UMX3 212 aaPredicted RBP1.97□□□□□ -2.09
LRRC28-212ENST00000558911 HSPE1-MOB4S4R3N1 261 aa1.97□□□□□ -2.09
LRRC28-212ENST00000558911 NAIPQ13075 1403 aa1.97□□□□□ -2.09
LRRC28-212ENST00000558911 MYCBP2O75592 4640 aa1.97□□□□□ -2.09
LRRC28-212ENST00000558911 CCDC88CQ9P219 2028 aa1.96□□□□□ -2.09
LRRC28-212ENST00000558911 PRR14LQ5THK1 2151 aa1.96□□□□□ -2.1
LRRC28-212ENST00000558911 DNAH9Q9NYC9 4486 aa1.96□□□□□ -2.1
LRRC28-212ENST00000558911 IGKV2D-26A0A0A0MRZ7 120 aa1.96□□□□□ -2.1
LRRC28-212ENST00000558911 TRAV1-1A0A0B4J248 108 aa1.96□□□□□ -2.1
LRRC28-212ENST00000558911 TRAV40A0A0B4J280 105 aa1.96□□□□□ -2.1
LRRC28-212ENST00000558911 CCDC179H3BU77 68 aa1.96□□□□□ -2.1
LRRC28-212ENST00000558911 SYNGR2O43760 224 aa1.96□□□□□ -2.1
LRRC28-212ENST00000558911 CPSF4O95639 269 aaKnown RBP1.96□□□□□ -2.1
LRRC28-212ENST00000558911 CD3DP04234 171 aa1.96□□□□□ -2.1
LRRC28-212ENST00000558911 HIST1H1BP16401 226 aaKnown RBP1.96□□□□□ -2.1
LRRC28-212ENST00000558911 ZNF93P35789 620 aaPredicted RBP1.96□□□□□ -2.1
LRRC28-212ENST00000558911 PCBD1P61457 104 aa1.96□□□□□ -2.1
LRRC28-212ENST00000558911 SS18Q15532 418 aa1.96□□□□□ -2.1
LRRC28-212ENST00000558911 ESRGQ1W209 222 aa1.96□□□□□ -2.1
LRRC28-212ENST00000558911 AAED1Q7RTV5 226 aa1.96□□□□□ -2.1
LRRC28-212ENST00000558911 KRTAP11-1Q8IUC1 163 aa1.96□□□□□ -2.1
LRRC28-212ENST00000558911 Q8IYB0 196 aa1.96□□□□□ -2.1
LRRC28-212ENST00000558911 Q8N9L7 120 aa1.96□□□□□ -2.1
LRRC28-212ENST00000558911 PP6455Q8WZ26 134 aa1.96□□□□□ -2.1
LRRC28-212ENST00000558911 CIB3Q96Q77 187 aaPredicted RBP1.96□□□□□ -2.1
LRRC28-212ENST00000558911 OR4C12Q96R67 309 aa1.96□□□□□ -2.1
LRRC28-212ENST00000558911 LINC00467Q9BRT7 94 aa1.96□□□□□ -2.1
LRRC28-212ENST00000558911 NHP2Q9NX24 153 aaKnown RBP1.96□□□□□ -2.1
LRRC28-212ENST00000558911 LSM2Q9Y333 95 aaKnown RBP1.96□□□□□ -2.1
LRRC28-212ENST00000558911 DNAJC15Q9Y5T4 150 aa1.96□□□□□ -2.1
LRRC28-212ENST00000558911 MYLKQ15746 1914 aa1.95□□□□□ -2.1
LRRC28-212ENST00000558911 LAMB1P07942 1786 aa1.95□□□□□ -2.1
LRRC28-212ENST00000558911 B4DSR2 109 aa1.95□□□□□ -2.1
LRRC28-212ENST00000558911 OR1I1O60431 355 aa1.95□□□□□ -2.1
LRRC28-212ENST00000558911 ZNF737O75373 536 aa1.95□□□□□ -2.1
LRRC28-212ENST00000558911 CTSDP07339 412 aaPredicted RBP1.95□□□□□ -2.1
LRRC28-212ENST00000558911 CD14P08571 375 aa1.95□□□□□ -2.1
LRRC28-212ENST00000558911 KRTAP1-4P0C5Y4 121 aa1.95□□□□□ -2.1
LRRC28-212ENST00000558911 MGST1P10620 155 aaKnown RBP1.95□□□□□ -2.1
LRRC28-212ENST00000558911 BLCAPP62952 87 aa1.95□□□□□ -2.1
LRRC28-212ENST00000558911 MRPS36P82909 103 aaKnown RBP1.95□□□□□ -2.1
LRRC28-212ENST00000558911 TEX261Q6UWH6 196 aa1.95□□□□□ -2.1
LRRC28-212ENST00000558911 LINC00301Q8NCQ3 95 aa1.95□□□□□ -2.1
LRRC28-212ENST00000558911 HIGD2AQ9BW72 106 aa1.95□□□□□ -2.1
LRRC28-212ENST00000558911 CCDC167Q9P0B6 97 aa1.95□□□□□ -2.1
LRRC28-212ENST00000558911 KLK12Q9UKR0 248 aa1.95□□□□□ -2.1
LRRC28-212ENST00000558911 ZFP30Q9Y2G7 519 aa1.95□□□□□ -2.1
LRRC28-212ENST00000558911 TPRKBQ9Y3C4 175 aa1.95□□□□□ -2.1
LRRC28-212ENST00000558911 R4GN34 69 aa1.95□□□□□ -2.1
LRRC28-212ENST00000558911 IGKV2D-24A0A075B6R9 120 aa1.94□□□□□ -2.1
LRRC28-212ENST00000558911 LOC107986453A0A1B0GWG9 222 aa1.94□□□□□ -2.1
LRRC28-212ENST00000558911 OR51F1A6NGY5 319 aa1.94□□□□□ -2.1
LRRC28-212ENST00000558911 HMSDA8MTL9 139 aa1.94□□□□□ -2.1
LRRC28-212ENST00000558911 CDC42EP2O14613 210 aa1.94□□□□□ -2.1
LRRC28-212ENST00000558911 PSCAO43653 123 aa1.94□□□□□ -2.1
LRRC28-212ENST00000558911 IGLV1-51P01701 117 aa1.94□□□□□ -2.1
LRRC28-212ENST00000558911 PYYP10082 97 aa1.94□□□□□ -2.1
LRRC28-212ENST00000558911 SLC25A4P12235 298 aa1.94□□□□□ -2.1
LRRC28-212ENST00000558911 GNG2P59768 71 aa1.94□□□□□ -2.1
LRRC28-212ENST00000558911 LSM3P62310 102 aaKnown RBP1.94□□□□□ -2.1
LRRC28-212ENST00000558911 HMGN2P46Q86SG4 172 aa1.94□□□□□ -2.1
LRRC28-212ENST00000558911 Q8N814 137 aa1.94□□□□□ -2.1
LRRC28-212ENST00000558911 CCL4L1Q8NHW4 92 aa1.94□□□□□ -2.1
LRRC28-212ENST00000558911 DPH3Q96FX2 82 aa1.94□□□□□ -2.1
LRRC28-212ENST00000558911 SLC35B3Q9H1N7 401 aa1.94□□□□□ -2.1
LRRC28-212ENST00000558911 TAS2R4Q9NYW5 299 aa1.94□□□□□ -2.1
LRRC28-212ENST00000558911 TRBV20-1A0A075B6N2 111 aa1.93□□□□□ -2.1
LRRC28-212ENST00000558911 hDV103S1A0JD37 113 aa1.93□□□□□ -2.1
LRRC28-212ENST00000558911 FNDC10F2Z333 226 aa1.93□□□□□ -2.1
LRRC28-212ENST00000558911 M0R233 179 aa1.93□□□□□ -2.1
LRRC28-212ENST00000558911 LYRM1O43325 122 aa1.93□□□□□ -2.1
LRRC28-212ENST00000558911 PMP2P02689 132 aa1.93□□□□□ -2.1
LRRC28-212ENST00000558911 SAA1P0DJI8 122 aaPredicted RBP1.93□□□□□ -2.1
LRRC28-212ENST00000558911 PEBP1P30086 187 aaKnown RBP1.93□□□□□ -2.1
LRRC28-212ENST00000558911 HINT1P49773 126 aaPredicted RBP1.93□□□□□ -2.1
LRRC28-212ENST00000558911 TPPP2P59282 170 aa1.93□□□□□ -2.1
LRRC28-212ENST00000558911 TMEM258P61165 79 aa1.93□□□□□ -2.1
LRRC28-212ENST00000558911 ZNF90Q03938 601 aa1.93□□□□□ -2.1
LRRC28-212ENST00000558911 CIRBPQ14011 172 aaKnown RBP1.93□□□□□ -2.1
LRRC28-212ENST00000558911 PYDC2Q56P42 97 aa1.93□□□□□ -2.1
LRRC28-212ENST00000558911 NCMAPQ5T1S8 102 aa1.93□□□□□ -2.1
LRRC28-212ENST00000558911 GTF2H5Q6ZYL4 71 aa1.93□□□□□ -2.1
LRRC28-212ENST00000558911 C8orf59Q8N0T1 100 aaPredicted RBP1.93□□□□□ -2.1
LRRC28-212ENST00000558911 KCNRGQ8N5I3 272 aa1.93□□□□□ -2.1
LRRC28-212ENST00000558911 OTOSQ8NHW6 89 aa1.93□□□□□ -2.1
LRRC28-212ENST00000558911 SNRNP25Q9BV90 132 aaKnown RBP1.93□□□□□ -2.1
LRRC28-212ENST00000558911 METTL1Q9UBP6 276 aaKnown RBP1.93□□□□□ -2.1
LRRC28-212ENST00000558911 LY96Q9Y6Y9 160 aa1.93□□□□□ -2.1
LRRC28-212ENST00000558911 HELZP42694 1942 aaKnown RBP1.93□□□□□ -2.1
LRRC28-212ENST00000558911 LRP2P98164 4655 aa1.93□□□□□ -2.1
LRRC28-212ENST00000558911 LOC285556D6RIA3 1793 aa1.93□□□□□ -2.1
LRRC28-212ENST00000558911 FAT2Q9NYQ8 4349 aa1.92□□□□□ -2.1
LRRC28-212ENST00000558911 IGHV3-64A0A075B6Q5 118 aa1.92□□□□□ -2.1
LRRC28-212ENST00000558911 TMSB15BA0A087X1C1 80 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms