RNA–Protein interactions for RNA: ENST00000558894.5

SMAD3-209, Transcript of SMAD family member 3, humanhuman

TSL 5

Gene SMAD3, Length 797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-209ENST00000558894 HAMPP81172 84 aa3.67□□□□□ -1.82
SMAD3-209ENST00000558894 PYY3Q5JQD4 70 aa3.67□□□□□ -1.82
SMAD3-209ENST00000558894 Q5VSD8 79 aa3.67□□□□□ -1.82
SMAD3-209ENST00000558894 C10orf126Q8N4M7 172 aa3.67□□□□□ -1.82
SMAD3-209ENST00000558894 C14orf178Q8N769 122 aaPredicted RBP3.67□□□□□ -1.82
SMAD3-209ENST00000558894 ATP6V0E2Q8NHE4 81 aa3.67□□□□□ -1.82
SMAD3-209ENST00000558894 DNAJC30Q96LL9 226 aa3.67□□□□□ -1.82
SMAD3-209ENST00000558894 NDFIP1Q9BT67 221 aa3.67□□□□□ -1.82
SMAD3-209ENST00000558894 GTSF1LQ9H1H1 148 aa3.67□□□□□ -1.82
SMAD3-209ENST00000558894 AP5S1Q9NUS5 200 aa3.67□□□□□ -1.82
SMAD3-209ENST00000558894 IL36BQ9NZH7 164 aa3.67□□□□□ -1.82
SMAD3-209ENST00000558894 TRAV8-6A0A0B4J262 113 aa3.66□□□□□ -1.82
SMAD3-209ENST00000558894 TRBV6-1A0A0K0K1D8 114 aa3.66□□□□□ -1.82
SMAD3-209ENST00000558894 A8MWV9 139 aa3.66□□□□□ -1.82
SMAD3-209ENST00000558894 K7EQM0 130 aa3.66□□□□□ -1.82
SMAD3-209ENST00000558894 PEX7O00628 323 aa3.66□□□□□ -1.82
SMAD3-209ENST00000558894 ARPC5O15511 151 aa3.66□□□□□ -1.82
SMAD3-209ENST00000558894 SH2D1AO60880 128 aa3.66□□□□□ -1.82
SMAD3-209ENST00000558894 LTAP01374 205 aa3.66□□□□□ -1.82
SMAD3-209ENST00000558894 ARMS2P0C7Q2 107 aa3.66□□□□□ -1.82
SMAD3-209ENST00000558894 INAFM2P0DMQ5 153 aa3.66□□□□□ -1.82
SMAD3-209ENST00000558894 PPT1P50897 306 aa3.66□□□□□ -1.82
SMAD3-209ENST00000558894 UBE2G2P60604 165 aa3.66□□□□□ -1.82
SMAD3-209ENST00000558894 LAGE3Q14657 143 aa3.66□□□□□ -1.82
SMAD3-209ENST00000558894 ZNF674Q2M3X9 581 aa3.66□□□□□ -1.82
SMAD3-209ENST00000558894 OR10J3Q5JRS4 329 aa3.66□□□□□ -1.82
SMAD3-209ENST00000558894 Q6ZSA8 131 aa3.66□□□□□ -1.82
SMAD3-209ENST00000558894 DAZ4Q86SG3 579 aaKnown RBP3.66□□□□□ -1.82
SMAD3-209ENST00000558894 MTURNQ8N3F0 131 aa3.66□□□□□ -1.82
SMAD3-209ENST00000558894 OR11H4Q8NGC9 324 aa3.66□□□□□ -1.82
SMAD3-209ENST00000558894 OR2T35Q8NGX2 323 aa3.66□□□□□ -1.82
SMAD3-209ENST00000558894 NTN5Q8WTR8 489 aaPredicted RBP3.66□□□□□ -1.82
SMAD3-209ENST00000558894 HIST1H2BAQ96A08 127 aa3.66□□□□□ -1.82
SMAD3-209ENST00000558894 NUDT11Q96G61 164 aa3.66□□□□□ -1.82
SMAD3-209ENST00000558894 SFRP2Q96HF1 295 aa3.66□□□□□ -1.82
SMAD3-209ENST00000558894 PRADC1Q9BSG0 188 aa3.66□□□□□ -1.82
SMAD3-209ENST00000558894 Q9HAA7 133 aa3.66□□□□□ -1.82
SMAD3-209ENST00000558894 DAZ3Q9NR90 486 aaKnown RBP3.66□□□□□ -1.82
SMAD3-209ENST00000558894 FLG2Q5D862 2391 aaPredicted RBP3.65□□□□□ -1.83
SMAD3-209ENST00000558894 FXYD6-FXYD2A0A087WZ82 144 aa3.65□□□□□ -1.83
SMAD3-209ENST00000558894 IGLV5-52A0A0A0MRZ9 124 aa3.65□□□□□ -1.83
SMAD3-209ENST00000558894 A0A0D9SG52 128 aa3.65□□□□□ -1.83
SMAD3-209ENST00000558894 A0A1B0GV72 72 aa3.65□□□□□ -1.83
SMAD3-209ENST00000558894 GRIFINA4D1Z8 144 aa3.65□□□□□ -1.83
SMAD3-209ENST00000558894 MAP1LC3B2A6NCE7 125 aa3.65□□□□□ -1.83
SMAD3-209ENST00000558894 GAGE12JA6NER3 117 aa3.65□□□□□ -1.83
SMAD3-209ENST00000558894 B4DEV8 164 aa3.65□□□□□ -1.83
SMAD3-209ENST00000558894 SMLR1H3BR10 107 aa3.65□□□□□ -1.83
SMAD3-209ENST00000558894 H3BVH4 76 aa3.65□□□□□ -1.83
SMAD3-209ENST00000558894 ASIPP42127 132 aa3.65□□□□□ -1.83
SMAD3-209ENST00000558894 KRTAP10-4P60372 401 aaPredicted RBP3.65□□□□□ -1.83
SMAD3-209ENST00000558894 GAGE4Q13068 117 aa3.65□□□□□ -1.83
SMAD3-209ENST00000558894 GAGE5Q13069 117 aa3.65□□□□□ -1.83
SMAD3-209ENST00000558894 ZNF345Q14585 488 aa3.65□□□□□ -1.83
SMAD3-209ENST00000558894 TMEM241Q24JQ0 296 aa3.65□□□□□ -1.83
SMAD3-209ENST00000558894 GAGE13Q4V321 117 aa3.65□□□□□ -1.83
SMAD3-209ENST00000558894 AKR1C8PQ5T2L2 129 aa3.65□□□□□ -1.83
SMAD3-209ENST00000558894 PET117Q6UWS5 81 aa3.65□□□□□ -1.83
SMAD3-209ENST00000558894 INO80EQ8NBZ0 244 aaPredicted RBP3.65□□□□□ -1.83
SMAD3-209ENST00000558894 MBD3L1Q8WWY6 194 aa3.65□□□□□ -1.83
SMAD3-209ENST00000558894 TMEM70Q9BUB7 260 aa3.65□□□□□ -1.83
SMAD3-209ENST00000558894 MLST8Q9BVC4 326 aa3.65□□□□□ -1.83
SMAD3-209ENST00000558894 MAP1LC3BQ9GZQ8 125 aa3.65□□□□□ -1.83
SMAD3-209ENST00000558894 ZFP30Q9Y2G7 519 aa3.65□□□□□ -1.83
SMAD3-209ENST00000558894 A0A087WWL8 130 aa3.64□□□□□ -1.83
SMAD3-209ENST00000558894 BORCS7-ASMTA0A0B4J1R7 106 aa3.64□□□□□ -1.83
SMAD3-209ENST00000558894 M0R036 132 aa3.64□□□□□ -1.83
SMAD3-209ENST00000558894 UBE2D3P61077 147 aa3.64□□□□□ -1.83
SMAD3-209ENST00000558894 UBE2D2P62837 147 aa3.64□□□□□ -1.83
SMAD3-209ENST00000558894 JOSD1Q15040 202 aaPredicted RBP3.64□□□□□ -1.83
SMAD3-209ENST00000558894 PRR27Q6MZM9 219 aa3.64□□□□□ -1.83
SMAD3-209ENST00000558894 TMUB2Q71RG4 321 aa3.64□□□□□ -1.83
SMAD3-209ENST00000558894 NIT1Q86X76 327 aa3.64□□□□□ -1.83
SMAD3-209ENST00000558894 KCNRGQ8N5I3 272 aa3.64□□□□□ -1.83
SMAD3-209ENST00000558894 ORAOV1Q8WV07 137 aa3.64□□□□□ -1.83
SMAD3-209ENST00000558894 FMC1Q96HJ9 113 aa3.64□□□□□ -1.83
SMAD3-209ENST00000558894 SSBP4Q9BWG4 385 aaPredicted RBP3.64□□□□□ -1.83
SMAD3-209ENST00000558894 KIF25-AS1Q9Y6Z4 181 aa3.64□□□□□ -1.83
SMAD3-209ENST00000558894 TMSB15BA0A087X1C1 80 aa3.63□□□□□ -1.83
SMAD3-209ENST00000558894 C20orf202A1L168 122 aa3.63□□□□□ -1.83
SMAD3-209ENST00000558894 LECT2O14960 151 aa3.63□□□□□ -1.83
SMAD3-209ENST00000558894 PSCAO43653 123 aa3.63□□□□□ -1.83
SMAD3-209ENST00000558894 PAGE4O60829 102 aa3.63□□□□□ -1.83
SMAD3-209ENST00000558894 NPSP0C0P6 89 aa3.63□□□□□ -1.83
SMAD3-209ENST00000558894 SEC11BP0C7V7 166 aa3.63□□□□□ -1.83
SMAD3-209ENST00000558894 RAB5AP20339 215 aa3.63□□□□□ -1.83
SMAD3-209ENST00000558894 S100A4P26447 101 aaKnown RBP3.63□□□□□ -1.83
SMAD3-209ENST00000558894 TAGLN2P37802 199 aaKnown RBP3.63□□□□□ -1.83
SMAD3-209ENST00000558894 RPL19P84098 196 aaKnown RBP3.63□□□□□ -1.83
SMAD3-209ENST00000558894 RHEBQ15382 184 aa3.63□□□□□ -1.83
SMAD3-209ENST00000558894 LINC01620Q4KN68 170 aa3.63□□□□□ -1.83
SMAD3-209ENST00000558894 FAM162BQ5T6X4 162 aa3.63□□□□□ -1.83
SMAD3-209ENST00000558894 CBLN2Q8IUK8 224 aa3.63□□□□□ -1.83
SMAD3-209ENST00000558894 ZFP82Q8N141 532 aa3.63□□□□□ -1.83
SMAD3-209ENST00000558894 OR10G8Q8NGN5 311 aa3.63□□□□□ -1.83
SMAD3-209ENST00000558894 FRZBQ92765 325 aa3.63□□□□□ -1.83
SMAD3-209ENST00000558894 SNHG12Q9BXW3 62 aa3.63□□□□□ -1.83
SMAD3-209ENST00000558894 CDIP1Q9H305 208 aa3.63□□□□□ -1.83
SMAD3-209ENST00000558894 A0A087WWC5 75 aa3.62□□□□□ -1.83
SMAD3-209ENST00000558894 TRAV8-3A0A0A6YYJ7 113 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms