RNA–Protein interactions for RNA: ENST00000558861.1

LRRC28-209, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-209ENST00000558861 GNRH2O43555 120 aa4.14□□□□□ -1.75
LRRC28-209ENST00000558861 SPINK4O60575 86 aa4.14□□□□□ -1.75
LRRC28-209ENST00000558861 SH2D1AO60880 128 aa4.14□□□□□ -1.75
LRRC28-209ENST00000558861 TYMSP04818 313 aa4.14□□□□□ -1.75
LRRC28-209ENST00000558861 RNASE3P12724 160 aaKnown RBP4.14□□□□□ -1.75
LRRC28-209ENST00000558861 BAGE2Q86Y30 109 aa4.14□□□□□ -1.75
LRRC28-209ENST00000558861 SMIM12Q96EX1 92 aa4.14□□□□□ -1.75
LRRC28-209ENST00000558861 NDFIP1Q9BT67 221 aa4.14□□□□□ -1.75
LRRC28-209ENST00000558861 NOP10Q9NPE3 64 aaKnown RBP4.14□□□□□ -1.75
LRRC28-209ENST00000558861 MED9Q9NWA0 146 aa4.14□□□□□ -1.75
LRRC28-209ENST00000558861 TIMM8BQ9Y5J9 83 aaPredicted RBP4.14□□□□□ -1.75
LRRC28-209ENST00000558861 CXCL1P09341 107 aa4.13□□□□□ -1.75
LRRC28-209ENST00000558861 SPART-AS1P0CW21 52 aa4.13□□□□□ -1.75
LRRC28-209ENST00000558861 EMP1P54849 157 aa4.13□□□□□ -1.75
LRRC28-209ENST00000558861 DSCR10P59022 87 aa4.13□□□□□ -1.75
LRRC28-209ENST00000558861 UBE2G1P62253 170 aa4.13□□□□□ -1.75
LRRC28-209ENST00000558861 CASC10Q5T4H9 136 aa4.13□□□□□ -1.75
LRRC28-209ENST00000558861 FAM162BQ5T6X4 162 aa4.13□□□□□ -1.75
LRRC28-209ENST00000558861 Q6ZTI0 123 aa4.13□□□□□ -1.75
LRRC28-209ENST00000558861 PTH2Q96A98 100 aa4.13□□□□□ -1.75
LRRC28-209ENST00000558861 NDUFAF3Q9BU61 184 aa4.13□□□□□ -1.75
LRRC28-209ENST00000558861 SMDT1Q9H4I9 107 aa4.13□□□□□ -1.75
LRRC28-209ENST00000558861 LY96Q9Y6Y9 160 aa4.13□□□□□ -1.75
LRRC28-209ENST00000558861 HECTD4Q9Y4D8 3996 aa4.13□□□□□ -1.75
LRRC28-209ENST00000558861 NACAE9PAV3 2078 aa4.12□□□□□ -1.75
LRRC28-209ENST00000558861 LINC00862A6NCI5 91 aa4.12□□□□□ -1.75
LRRC28-209ENST00000558861 C3orf84H3BNL1 204 aa4.12□□□□□ -1.75
LRRC28-209ENST00000558861 HTN1P15515 57 aa4.12□□□□□ -1.75
LRRC28-209ENST00000558861 GNG4P50150 75 aa4.12□□□□□ -1.75
LRRC28-209ENST00000558861 RPL19P84098 196 aaKnown RBP4.12□□□□□ -1.75
LRRC28-209ENST00000558861 OR5I1Q13606 314 aa4.12□□□□□ -1.75
LRRC28-209ENST00000558861 LGALS9BQ3B8N2 356 aa4.12□□□□□ -1.75
LRRC28-209ENST00000558861 LINC00242Q5T6M2 205 aa4.12□□□□□ -1.75
LRRC28-209ENST00000558861 UFSP1Q6NVU6 142 aa4.12□□□□□ -1.75
LRRC28-209ENST00000558861 CEMP1Q6PRD7 247 aaPredicted RBP4.12□□□□□ -1.75
LRRC28-209ENST00000558861 ATRAIDQ6UW56 229 aa4.12□□□□□ -1.75
LRRC28-209ENST00000558861 LINC01551Q86U37 167 aa4.12□□□□□ -1.75
LRRC28-209ENST00000558861 KCNS1Q96KK3 526 aa4.12□□□□□ -1.75
LRRC28-209ENST00000558861 EIF5A2Q9GZV4 153 aaKnown RBP4.12□□□□□ -1.75
LRRC28-209ENST00000558861 IL36BQ9NZH7 164 aa4.12□□□□□ -1.75
LRRC28-209ENST00000558861 B4DEV8 164 aa4.11□□□□□ -1.75
LRRC28-209ENST00000558861 M0R036 132 aa4.11□□□□□ -1.75
LRRC28-209ENST00000558861 M0R2P5 195 aa4.11□□□□□ -1.75
LRRC28-209ENST00000558861 SNAI2O43623 268 aa4.11□□□□□ -1.75
LRRC28-209ENST00000558861 IGLC6P0CF74 106 aa4.11□□□□□ -1.75
LRRC28-209ENST00000558861 ADCYAP1P18509 176 aa4.11□□□□□ -1.75
LRRC28-209ENST00000558861 HIGD2BQ4VC39 106 aa4.11□□□□□ -1.75
LRRC28-209ENST00000558861 FAM231DQ6ZW35 169 aa4.11□□□□□ -1.75
LRRC28-209ENST00000558861 SMIM7Q9BQ49 75 aa4.11□□□□□ -1.75
LRRC28-209ENST00000558861 CNFNQ9BYD5 112 aa4.11□□□□□ -1.75
LRRC28-209ENST00000558861 MRPL16Q9NX20 251 aaKnown RBP4.11□□□□□ -1.75
LRRC28-209ENST00000558861 DHRS4-AS1Q9P1J3 65 aa4.11□□□□□ -1.75
LRRC28-209ENST00000558861 NAGKQ9UJ70 344 aa4.11□□□□□ -1.75
LRRC28-209ENST00000558861 PKHD1P08F94 4074 aa4.11□□□□□ -1.75
LRRC28-209ENST00000558861 TRAV9-2A0A087WT02 112 aa4.1□□□□□ -1.75
LRRC28-209ENST00000558861 TRGV1A0A0A0MS02 117 aa4.1□□□□□ -1.75
LRRC28-209ENST00000558861 TRAV10A0A0B4J240 114 aa4.1□□□□□ -1.75
LRRC28-209ENST00000558861 GRIFINA4D1Z8 144 aa4.1□□□□□ -1.75
LRRC28-209ENST00000558861 ORM1P02763 201 aa4.1□□□□□ -1.75
LRRC28-209ENST00000558861 OR5AL1P0C617 328 aa4.1□□□□□ -1.75
LRRC28-209ENST00000558861 ARMS2P0C7Q2 107 aa4.1□□□□□ -1.75
LRRC28-209ENST00000558861 DEFB130BP0DP73 79 aa4.1□□□□□ -1.75
LRRC28-209ENST00000558861 DEFB130AP0DP74 79 aa4.1□□□□□ -1.75
LRRC28-209ENST00000558861 LINC00315P59091 139 aa4.1□□□□□ -1.75
LRRC28-209ENST00000558861 DAD1P61803 113 aa4.1□□□□□ -1.75
LRRC28-209ENST00000558861 RPL23P62829 140 aaKnown RBP4.1□□□□□ -1.75
LRRC28-209ENST00000558861 PEA15Q15121 130 aa4.1□□□□□ -1.75
LRRC28-209ENST00000558861 FAM74A3Q4VXF1 159 aa4.1□□□□□ -1.75
LRRC28-209ENST00000558861 ZFAND6Q6FIF0 208 aa4.1□□□□□ -1.75
LRRC28-209ENST00000558861 GTSF1Q8WW33 167 aa4.1□□□□□ -1.75
LRRC28-209ENST00000558861 RNASE7Q9H1E1 156 aaKnown RBP4.1□□□□□ -1.75
LRRC28-209ENST00000558861 APLNQ9ULZ1 77 aa4.1□□□□□ -1.75
LRRC28-209ENST00000558861 DNAH5Q8TE73 4624 aa4.09□□□□□ -1.75
LRRC28-209ENST00000558861 BIRC6Q9NR09 4857 aa4.09□□□□□ -1.75
LRRC28-209ENST00000558861 TMSB15BA0A087X1C1 80 aa4.09□□□□□ -1.75
LRRC28-209ENST00000558861 DEFB131BA0A096LNP1 70 aa4.09□□□□□ -1.75
LRRC28-209ENST00000558861 NUPR2A6NF83 97 aa4.09□□□□□ -1.75
LRRC28-209ENST00000558861 ZNF727A8MUV8 499 aa4.09□□□□□ -1.75
LRRC28-209ENST00000558861 H3BVH4 76 aa4.09□□□□□ -1.75
LRRC28-209ENST00000558861 RS1O15537 224 aa4.09□□□□□ -1.75
LRRC28-209ENST00000558861 GZMBP10144 247 aa4.09□□□□□ -1.75
LRRC28-209ENST00000558861 MGST1P10620 155 aaKnown RBP4.09□□□□□ -1.75
LRRC28-209ENST00000558861 CTRLP40313 264 aa4.09□□□□□ -1.75
LRRC28-209ENST00000558861 ASIPP42127 132 aa4.09□□□□□ -1.75
LRRC28-209ENST00000558861 FOXA3P55318 350 aaPredicted RBP4.09□□□□□ -1.75
LRRC28-209ENST00000558861 RAB14P61106 215 aa4.09□□□□□ -1.75
LRRC28-209ENST00000558861 SOHLH1Q5JUK2 328 aa4.09□□□□□ -1.75
LRRC28-209ENST00000558861 C10orf91Q5T1B1 145 aa4.09□□□□□ -1.75
LRRC28-209ENST00000558861 CFAP126Q5VTH2 177 aa4.09□□□□□ -1.75
LRRC28-209ENST00000558861 UQCC3Q6UW78 93 aa4.09□□□□□ -1.75
LRRC28-209ENST00000558861 OR10AG1Q8NH19 301 aa4.09□□□□□ -1.75
LRRC28-209ENST00000558861 ISOC2Q96AB3 205 aa4.09□□□□□ -1.75
LRRC28-209ENST00000558861 VSIG2Q96IQ7 327 aa4.09□□□□□ -1.75
LRRC28-209ENST00000558861 FAM210BQ96KR6 192 aa4.09□□□□□ -1.75
LRRC28-209ENST00000558861 RPS10P5Q9NQ39 176 aa4.09□□□□□ -1.75
LRRC28-209ENST00000558861 NAT8Q9UHE5 227 aa4.09□□□□□ -1.75
LRRC28-209ENST00000558861 V9GYV3 84 aa4.09□□□□□ -1.75
LRRC28-209ENST00000558861 TRAV4A0A0B4J268 109 aa4.08□□□□□ -1.76
LRRC28-209ENST00000558861 TMEM218A2RU14 115 aa4.08□□□□□ -1.76
LRRC28-209ENST00000558861 H3BNG1 76 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms