RNA–Protein interactions for RNA: ENST00000558768.5

TRPM1-208, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRPM1, Length 4,581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-208ENST00000558768 XCL1P47992 114 aa7.48□□□□□ -1.21
TRPM1-208ENST00000558768 RPS28P62857 69 aaKnown RBP7.48□□□□□ -1.21
TRPM1-208ENST00000558768 PIK3CD-AS1Q5SR53 167 aa7.48□□□□□ -1.21
TRPM1-208ENST00000558768 PIP4P2Q8N4L2 257 aa7.48□□□□□ -1.21
TRPM1-208ENST00000558768 IGHV4-4A0A075B6R2 117 aa7.47□□□□□ -1.21
TRPM1-208ENST00000558768 NDUFA4O00483 81 aa7.47□□□□□ -1.21
TRPM1-208ENST00000558768 PATE2Q6UY27 113 aa7.47□□□□□ -1.21
TRPM1-208ENST00000558768 LINC01560Q8TB33 94 aa7.47□□□□□ -1.21
TRPM1-208ENST00000558768 URB1-AS1Q96HZ7 61 aa7.47□□□□□ -1.21
TRPM1-208ENST00000558768 TEX22C9J3V5 150 aa7.47□□□□□ -1.21
TRPM1-208ENST00000558768 ZNF833PQ6ZTB9 187 aa7.47□□□□□ -1.21
TRPM1-208ENST00000558768 GP9P14770 177 aa7.47□□□□□ -1.21
TRPM1-208ENST00000558768 RPL39P62891 51 aaKnown RBP7.47□□□□□ -1.21
TRPM1-208ENST00000558768 XCL2Q9UBD3 114 aa7.47□□□□□ -1.21
TRPM1-208ENST00000558768 EP400Q96L91 3159 aa7.47□□□□□ -1.21
TRPM1-208ENST00000558768 TRBV6-1A0A0K0K1D8 114 aa7.47□□□□□ -1.21
TRPM1-208ENST00000558768 LINC01619G3V211 115 aa7.46□□□□□ -1.21
TRPM1-208ENST00000558768 GNRH2O43555 120 aa7.46□□□□□ -1.21
TRPM1-208ENST00000558768 BRI3O95415 125 aa7.46□□□□□ -1.21
TRPM1-208ENST00000558768 C17orf77Q96MU5 243 aa7.46□□□□□ -1.21
TRPM1-208ENST00000558768 MALRD1Q5VYJ5 2156 aa7.46□□□□□ -1.21
TRPM1-208ENST00000558768 PLXNB1O43157 2135 aa7.46□□□□□ -1.22
TRPM1-208ENST00000558768 TRBV7-3A0A075B6L6 115 aa7.46□□□□□ -1.22
TRPM1-208ENST00000558768 A0A1W2PRX2 142 aa7.46□□□□□ -1.22
TRPM1-208ENST00000558768 C11orf53Q8IXP5 236 aa7.46□□□□□ -1.22
TRPM1-208ENST00000558768 LINC00311Q8N616 119 aa7.46□□□□□ -1.22
TRPM1-208ENST00000558768 SPRY4Q9C004 299 aa7.46□□□□□ -1.22
TRPM1-208ENST00000558768 EPOPA6NHQ4 379 aa7.46□□□□□ -1.22
TRPM1-208ENST00000558768 LST1O00453 97 aa7.45□□□□□ -1.22
TRPM1-208ENST00000558768 IGKV4-1P06312 121 aa7.45□□□□□ -1.22
TRPM1-208ENST00000558768 C17orf58Q2M2W7 97 aa7.45□□□□□ -1.22
TRPM1-208ENST00000558768 NSUN5P1Q3KNT7 163 aa7.45□□□□□ -1.22
TRPM1-208ENST00000558768 SIRPDQ9H106 197 aa7.45□□□□□ -1.22
TRPM1-208ENST00000558768 MED14OSP0DP75 135 aa7.45□□□□□ -1.22
TRPM1-208ENST00000558768 LINC00322Q6ZN03 302 aaPredicted RBP7.45□□□□□ -1.22
TRPM1-208ENST00000558768 C20orf203Q8NBC4 194 aa7.45□□□□□ -1.22
TRPM1-208ENST00000558768 ZNF672Q499Z4 452 aaPredicted RBP7.44□□□□□ -1.22
TRPM1-208ENST00000558768 SORL1Q92673 2214 aa7.44□□□□□ -1.22
TRPM1-208ENST00000558768 LYNX1G3V0Z9 82 aa7.44□□□□□ -1.22
TRPM1-208ENST00000558768 LYNX1P0DP58 116 aa7.44□□□□□ -1.22
TRPM1-208ENST00000558768 Q0VFX4 171 aa7.44□□□□□ -1.22
TRPM1-208ENST00000558768 CASC2Q6XLA1 102 aa7.44□□□□□ -1.22
TRPM1-208ENST00000558768 F8WDY8 70 aa7.44□□□□□ -1.22
TRPM1-208ENST00000558768 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.44□□□□□ -1.22
TRPM1-208ENST00000558768 OTOGLQ3ZCN5 2332 aa7.43□□□□□ -1.22
TRPM1-208ENST00000558768 TMEM223A0PJW6 202 aa7.43□□□□□ -1.22
TRPM1-208ENST00000558768 MAPKAPK5-AS1Q8N8E1 139 aa7.43□□□□□ -1.22
TRPM1-208ENST00000558768 PCDH15Q96QU1 1955 aa7.43□□□□□ -1.22
TRPM1-208ENST00000558768 PATE3B3GLJ2 98 aa7.43□□□□□ -1.22
TRPM1-208ENST00000558768 TIRAPP58753 221 aa7.43□□□□□ -1.22
TRPM1-208ENST00000558768 Q6ZQT7 251 aa7.43□□□□□ -1.22
TRPM1-208ENST00000558768 Q8N9L7 120 aa7.43□□□□□ -1.22
TRPM1-208ENST00000558768 RMI2Q96E14 147 aa7.43□□□□□ -1.22
TRPM1-208ENST00000558768 H3BUX3 64 aa7.42□□□□□ -1.22
TRPM1-208ENST00000558768 LOXP28300 417 aaPredicted RBP7.42□□□□□ -1.22
TRPM1-208ENST00000558768 KLK5Q9Y337 293 aaPredicted RBP7.42□□□□□ -1.22
TRPM1-208ENST00000558768 SCXQ7RTU7 201 aa7.42□□□□□ -1.22
TRPM1-208ENST00000558768 NFE4Q86UQ8 179 aa7.42□□□□□ -1.22
TRPM1-208ENST00000558768 KIAA1549Q9HCM3 1950 aa7.42□□□□□ -1.22
TRPM1-208ENST00000558768 H0Y9J4 135 aa7.42□□□□□ -1.22
TRPM1-208ENST00000558768 ATP6V0E1O15342 81 aa7.42□□□□□ -1.22
TRPM1-208ENST00000558768 COX7BP24311 80 aa7.42□□□□□ -1.22
TRPM1-208ENST00000558768 CCL19Q99731 98 aa7.42□□□□□ -1.22
TRPM1-208ENST00000558768 NCR3O14931 201 aa7.41□□□□□ -1.22
TRPM1-208ENST00000558768 COX6B1P14854 86 aa7.41□□□□□ -1.22
TRPM1-208ENST00000558768 ZFAND3Q9H8U3 227 aa7.41□□□□□ -1.22
TRPM1-208ENST00000558768 ARHGAP32A7KAX9 2087 aa7.41□□□□□ -1.22
TRPM1-208ENST00000558768 CFHR3Q02985 330 aa7.41□□□□□ -1.22
TRPM1-208ENST00000558768 PRR4Q16378 134 aa7.41□□□□□ -1.22
TRPM1-208ENST00000558768 ZNF462Q96JM2 2506 aa7.41□□□□□ -1.22
TRPM1-208ENST00000558768 MYCNOSP40205 109 aa7.41□□□□□ -1.22
TRPM1-208ENST00000558768 EBI3Q14213 229 aa7.41□□□□□ -1.22
TRPM1-208ENST00000558768 CAMK2N2Q96S95 79 aa7.41□□□□□ -1.22
TRPM1-208ENST00000558768 IGHV4OR15-8A0A075B7B6 117 aa7.4□□□□□ -1.22
TRPM1-208ENST00000558768 A0A087WW49 117 aa7.4□□□□□ -1.22
TRPM1-208ENST00000558768 NEXN-AS1Q8NBZ9 246 aa7.4□□□□□ -1.22
TRPM1-208ENST00000558768 HCFC1P51610 2035 aa7.4□□□□□ -1.22
TRPM1-208ENST00000558768 ZNRD1Q9P1U0 126 aa7.4□□□□□ -1.22
TRPM1-208ENST00000558768 SPRR3Q9UBC9 169 aa7.4□□□□□ -1.22
TRPM1-208ENST00000558768 FAM222AQ5U5X8 452 aa7.4□□□□□ -1.23
TRPM1-208ENST00000558768 UBE2DNLQ8IWF7 75 aa7.4□□□□□ -1.23
TRPM1-208ENST00000558768 PRR14LQ5THK1 2151 aa7.39□□□□□ -1.23
TRPM1-208ENST00000558768 SPAG11BQ08648 103 aa7.39□□□□□ -1.23
TRPM1-208ENST00000558768 DEFB112Q30KQ8 113 aa7.39□□□□□ -1.23
TRPM1-208ENST00000558768 CLPSL2Q6UWE3 100 aa7.39□□□□□ -1.23
TRPM1-208ENST00000558768 IGHV7-4-1A0A0J9YVY3 117 aa7.39□□□□□ -1.23
TRPM1-208ENST00000558768 IGKV1-17P01599 117 aa7.39□□□□□ -1.23
TRPM1-208ENST00000558768 LINC00308Q8TCZ7 52 aa7.39□□□□□ -1.23
TRPM1-208ENST00000558768 H7C423 109 aa7.39□□□□□ -1.23
TRPM1-208ENST00000558768 IGHV3-30P01768 117 aa7.39□□□□□ -1.23
TRPM1-208ENST00000558768 IGHV3-30-5P0DP03 117 aa7.39□□□□□ -1.23
TRPM1-208ENST00000558768 HOXB4P17483 251 aaPredicted RBP7.39□□□□□ -1.23
TRPM1-208ENST00000558768 GATA4P43694 442 aa7.38□□□□□ -1.23
TRPM1-208ENST00000558768 TPSG1Q9NRR2 321 aa7.38□□□□□ -1.23
TRPM1-208ENST00000558768 C2orf16Q68DN1 1984 aa7.38□□□□□ -1.23
TRPM1-208ENST00000558768 IGKV1D-37A0A075B6S9 117 aa7.38□□□□□ -1.23
TRPM1-208ENST00000558768 C9orf47Q6ZRZ4 202 aa7.38□□□□□ -1.23
TRPM1-208ENST00000558768 MBD3L4A6NDZ8 208 aaPredicted RBP7.38□□□□□ -1.23
TRPM1-208ENST00000558768 MBD3L3A6NE82 208 aaPredicted RBP7.38□□□□□ -1.23
TRPM1-208ENST00000558768 MBD3L5A6NJ08 208 aaPredicted RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms