RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 LINC01619G3V211 115 aa11.64□□□□□ -0.55
AP4E1-202ENST00000558439 ELANEP08246 267 aa11.64□□□□□ -0.55
AP4E1-202ENST00000558439 TMEM262E9PQX1 116 aa11.64□□□□□ -0.55
AP4E1-202ENST00000558439 NSUN5P1Q3KNT7 163 aa11.64□□□□□ -0.55
AP4E1-202ENST00000558439 F8W1H4 67 aa11.64□□□□□ -0.55
AP4E1-202ENST00000558439 FOXI2Q6ZQN5 318 aa11.64□□□□□ -0.55
AP4E1-202ENST00000558439 GPHB5Q86YW7 130 aa11.64□□□□□ -0.55
AP4E1-202ENST00000558439 INSP01308 110 aa11.64□□□□□ -0.55
AP4E1-202ENST00000558439 CNFNQ9BYD5 112 aa11.64□□□□□ -0.55
AP4E1-202ENST00000558439 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.63□□□□□ -0.55
AP4E1-202ENST00000558439 IGKV2-29A2NJV5 120 aaPredicted RBP11.63□□□□□ -0.55
AP4E1-202ENST00000558439 TRAV12-1A0A0B4J245 112 aa11.63□□□□□ -0.55
AP4E1-202ENST00000558439 ZNRF2Q8NHG8 242 aa11.63□□□□□ -0.55
AP4E1-202ENST00000558439 HHLA3Q9XRX5 114 aa11.63□□□□□ -0.55
AP4E1-202ENST00000558439 A0A0J9YX75 114 aa11.62□□□□□ -0.55
AP4E1-202ENST00000558439 K7EMT4 169 aa11.62□□□□□ -0.55
AP4E1-202ENST00000558439 P0DMU3 169 aa11.62□□□□□ -0.55
AP4E1-202ENST00000558439 FAM231AP0DMU4 169 aa11.62□□□□□ -0.55
AP4E1-202ENST00000558439 FAM231CP0DMU5 169 aa11.62□□□□□ -0.55
AP4E1-202ENST00000558439 RNASE3P12724 160 aaKnown RBP11.62□□□□□ -0.55
AP4E1-202ENST00000558439 E9PLD3 99 aa11.62□□□□□ -0.55
AP4E1-202ENST00000558439 CEMP1Q6PRD7 247 aaPredicted RBP11.62□□□□□ -0.55
AP4E1-202ENST00000558439 TMEM101Q96IK0 257 aa11.61□□□□□ -0.55
AP4E1-202ENST00000558439 PRORYQ9H606 182 aa11.61□□□□□ -0.55
AP4E1-202ENST00000558439 TRGV4A0A0C4DH28 118 aa11.61□□□□□ -0.55
AP4E1-202ENST00000558439 PRM2P04554 102 aa11.61□□□□□ -0.55
AP4E1-202ENST00000558439 PRO1854Q9UHT4 67 aa11.61□□□□□ -0.55
AP4E1-202ENST00000558439 U3KQE9 123 aa11.61□□□□□ -0.55
AP4E1-202ENST00000558439 LRBAP50851 2863 aa11.61□□□□□ -0.55
AP4E1-202ENST00000558439 ZZEF1O43149 2961 aa11.61□□□□□ -0.55
AP4E1-202ENST00000558439 GAGE12JA6NER3 117 aa11.6□□□□□ -0.55
AP4E1-202ENST00000558439 M0R2P5 195 aa11.6□□□□□ -0.55
AP4E1-202ENST00000558439 SPINK8P0C7L1 97 aa11.6□□□□□ -0.55
AP4E1-202ENST00000558439 RPL36AP83881 106 aaKnown RBP11.6□□□□□ -0.55
AP4E1-202ENST00000558439 GAGE4Q13068 117 aa11.6□□□□□ -0.55
AP4E1-202ENST00000558439 GAGE5Q13069 117 aa11.6□□□□□ -0.55
AP4E1-202ENST00000558439 RPL36ALQ969Q0 106 aaKnown RBP11.6□□□□□ -0.55
AP4E1-202ENST00000558439 PF4P02776 101 aa11.6□□□□□ -0.55
AP4E1-202ENST00000558439 NEXN-AS1Q8NBZ9 246 aa11.6□□□□□ -0.55
AP4E1-202ENST00000558439 NDUFA12Q9UI09 145 aa11.6□□□□□ -0.55
AP4E1-202ENST00000558439 PIFOQ8TCI5 191 aa11.6□□□□□ -0.55
AP4E1-202ENST00000558439 OR13C6PQ8NH95 151 aa11.59□□□□□ -0.55
AP4E1-202ENST00000558439 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.59□□□□□ -0.55
AP4E1-202ENST00000558439 GAGE12HA6NDE8 117 aa11.59□□□□□ -0.55
AP4E1-202ENST00000558439 TMEM61Q8N0U2 210 aa11.59□□□□□ -0.55
AP4E1-202ENST00000558439 J3QLI3 93 aa11.59□□□□□ -0.55
AP4E1-202ENST00000558439 CHCHD5Q9BSY4 110 aa11.59□□□□□ -0.55
AP4E1-202ENST00000558439 COX8CQ7Z4L0 72 aa11.58□□□□□ -0.56
AP4E1-202ENST00000558439 A4D1N5 150 aa11.57□□□□□ -0.56
AP4E1-202ENST00000558439 MED14OSP0DP75 135 aa11.57□□□□□ -0.56
AP4E1-202ENST00000558439 AZU1P20160 251 aa11.57□□□□□ -0.56
AP4E1-202ENST00000558439 A0A1B0GV72 72 aa11.57□□□□□ -0.56
AP4E1-202ENST00000558439 PTH2Q96A98 100 aa11.57□□□□□ -0.56
AP4E1-202ENST00000558439 TM2D2Q9BX73 214 aa11.57□□□□□ -0.56
AP4E1-202ENST00000558439 RHOHQ15669 191 aa11.56□□□□□ -0.56
AP4E1-202ENST00000558439 SNCGO76070 127 aa11.56□□□□□ -0.56
AP4E1-202ENST00000558439 PROK1P58294 105 aa11.56□□□□□ -0.56
AP4E1-202ENST00000558439 C11orf68Q9H3H3 251 aaKnown RBP11.56□□□□□ -0.56
AP4E1-202ENST00000558439 PRIMA1Q86XR5 153 aa11.56□□□□□ -0.56
AP4E1-202ENST00000558439 TRAV8-3A0A0A6YYJ7 113 aa11.55□□□□□ -0.56
AP4E1-202ENST00000558439 K7EQG2 157 aa11.55□□□□□ -0.56
AP4E1-202ENST00000558439 DCHS1Q96JQ0 3298 aa11.55□□□□□ -0.56
AP4E1-202ENST00000558439 RHODO00212 210 aa11.55□□□□□ -0.56
AP4E1-202ENST00000558439 GAGE7O76087 117 aa11.55□□□□□ -0.56
AP4E1-202ENST00000558439 GAGE12FP0CL80 117 aa11.55□□□□□ -0.56
AP4E1-202ENST00000558439 GAGE12GP0CL81 117 aa11.55□□□□□ -0.56
AP4E1-202ENST00000558439 GAGE12IP0CL82 117 aa11.55□□□□□ -0.56
AP4E1-202ENST00000558439 DEFB130BP0DP73 79 aa11.55□□□□□ -0.56
AP4E1-202ENST00000558439 DEFB130AP0DP74 79 aa11.55□□□□□ -0.56
AP4E1-202ENST00000558439 TEX29Q8N6K0 151 aa11.55□□□□□ -0.56
AP4E1-202ENST00000558439 G3V4G9 280 aa11.55□□□□□ -0.56
AP4E1-202ENST00000558439 MUSTN1Q8IVN3 82 aa11.55□□□□□ -0.56
AP4E1-202ENST00000558439 TTC32Q5I0X7 151 aa11.54□□□□□ -0.56
AP4E1-202ENST00000558439 TIMM17AQ99595 171 aa11.54□□□□□ -0.56
AP4E1-202ENST00000558439 C2orf82Q6UX34 121 aa11.54□□□□□ -0.56
AP4E1-202ENST00000558439 C20orf203Q8NBC4 194 aa11.54□□□□□ -0.56
AP4E1-202ENST00000558439 IGHV4-4A0A075B6R2 117 aa11.53□□□□□ -0.56
AP4E1-202ENST00000558439 DAND5Q8N907 189 aa11.53□□□□□ -0.56
AP4E1-202ENST00000558439 HTN3P15516 51 aa11.53□□□□□ -0.56
AP4E1-202ENST00000558439 C18orf65Q6ZTR6 163 aa11.53□□□□□ -0.56
AP4E1-202ENST00000558439 IGLV2-18A0A075B6J9 118 aa11.53□□□□□ -0.56
AP4E1-202ENST00000558439 PSMB8P28062 276 aa11.53□□□□□ -0.56
AP4E1-202ENST00000558439 DCANP1Q8TF63 244 aa11.53□□□□□ -0.56
AP4E1-202ENST00000558439 TRBV20-1A0A075B6N2 111 aa11.52□□□□□ -0.56
AP4E1-202ENST00000558439 RNASE1P07998 156 aaKnown RBP11.52□□□□□ -0.56
AP4E1-202ENST00000558439 PRSS47A8MTI9 375 aa11.52□□□□□ -0.57
AP4E1-202ENST00000558439 TRBV7-9A0A0J9YWB2 115 aa11.52□□□□□ -0.57
AP4E1-202ENST00000558439 IGLV1-40P01703 118 aa11.52□□□□□ -0.57
AP4E1-202ENST00000558439 CFC1BP0CG36 223 aa11.52□□□□□ -0.57
AP4E1-202ENST00000558439 CFC1P0CG37 223 aa11.52□□□□□ -0.57
AP4E1-202ENST00000558439 ATXN8Q156A1 80 aa11.52□□□□□ -0.57
AP4E1-202ENST00000558439 ZFHX4Q86UP3 3567 aa11.51□□□□□ -0.57
AP4E1-202ENST00000558439 LINC00158P58513 81 aa11.51□□□□□ -0.57
AP4E1-202ENST00000558439 PSMG3-AS1Q96PY0 264 aa11.51□□□□□ -0.57
AP4E1-202ENST00000558439 LAMA5O15230 3695 aa11.51□□□□□ -0.57
AP4E1-202ENST00000558439 KLLNB2CW77 178 aa11.51□□□□□ -0.57
AP4E1-202ENST00000558439 LEPROTO15243 131 aa11.51□□□□□ -0.57
AP4E1-202ENST00000558439 NOP10Q9NPE3 64 aaKnown RBP11.51□□□□□ -0.57
AP4E1-202ENST00000558439 M0QY20 66 aa11.51□□□□□ -0.57
AP4E1-202ENST00000558439 SLC25A20O43772 301 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms