RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 IGLV1-50A0A075B6I6 118 aa3.4□□□□□ -1.87
RTF1-204ENST00000558117 IGHV3OR16-8A0A075B7F1 116 aa3.4□□□□□ -1.87
RTF1-204ENST00000558117 IGSF23A1L1A6 192 aa3.4□□□□□ -1.87
RTF1-204ENST00000558117 CEBPZOSA8MTT3 80 aa3.4□□□□□ -1.87
RTF1-204ENST00000558117 CST7O76096 145 aa3.4□□□□□ -1.87
RTF1-204ENST00000558117 SAA1P0DJI8 122 aaPredicted RBP3.4□□□□□ -1.87
RTF1-204ENST00000558117 SLC25A4P12235 298 aa3.4□□□□□ -1.87
RTF1-204ENST00000558117 SPCS3P61009 180 aa3.4□□□□□ -1.87
RTF1-204ENST00000558117 IFITM2Q01629 132 aa3.4□□□□□ -1.87
RTF1-204ENST00000558117 MSMO1Q15800 293 aa3.4□□□□□ -1.87
RTF1-204ENST00000558117 MPV17L2Q567V2 206 aa3.4□□□□□ -1.87
RTF1-204ENST00000558117 TMEM97Q5BJF2 176 aa3.4□□□□□ -1.87
RTF1-204ENST00000558117 C10orf55Q5SWW7 151 aa3.4□□□□□ -1.87
RTF1-204ENST00000558117 PRSS54Q6PEW0 395 aa3.4□□□□□ -1.87
RTF1-204ENST00000558117 C1orf158Q8N1D5 194 aa3.4□□□□□ -1.87
RTF1-204ENST00000558117 FAM24BQ8N5W8 94 aa3.4□□□□□ -1.87
RTF1-204ENST00000558117 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.4□□□□□ -1.87
RTF1-204ENST00000558117 Q8WTZ3 238 aa3.4□□□□□ -1.87
RTF1-204ENST00000558117 LSM10Q969L4 123 aaKnown RBP3.4□□□□□ -1.87
RTF1-204ENST00000558117 HYLS1Q96M11 299 aa3.4□□□□□ -1.87
RTF1-204ENST00000558117 CAMK2N2Q96S95 79 aa3.4□□□□□ -1.87
RTF1-204ENST00000558117 RNF5Q99942 180 aa3.4□□□□□ -1.87
RTF1-204ENST00000558117 NMES1Q9C002 83 aa3.4□□□□□ -1.87
RTF1-204ENST00000558117 WFDC1Q9HC57 220 aa3.4□□□□□ -1.87
RTF1-204ENST00000558117 PSENENQ9NZ42 101 aa3.4□□□□□ -1.87
RTF1-204ENST00000558117 WASHC3Q9Y3C0 194 aa3.4□□□□□ -1.87
RTF1-204ENST00000558117 RFNGQ9Y644 331 aa3.4□□□□□ -1.87
RTF1-204ENST00000558117 E7EUB6 86 aa3.39□□□□□ -1.87
RTF1-204ENST00000558117 TMEM250H0YL14 139 aa3.39□□□□□ -1.87
RTF1-204ENST00000558117 SYNGR2O43760 224 aa3.39□□□□□ -1.87
RTF1-204ENST00000558117 PITX3O75364 302 aa3.39□□□□□ -1.87
RTF1-204ENST00000558117 SNAPC5O75971 98 aa3.39□□□□□ -1.87
RTF1-204ENST00000558117 ATG12O94817 140 aa3.39□□□□□ -1.87
RTF1-204ENST00000558117 CFDP00746 253 aaPredicted RBP3.39□□□□□ -1.87
RTF1-204ENST00000558117 HRASP01112 189 aa3.39□□□□□ -1.87
RTF1-204ENST00000558117 METTL15P1P0C7V9 234 aa3.39□□□□□ -1.87
RTF1-204ENST00000558117 RPL19P84098 196 aaKnown RBP3.39□□□□□ -1.87
RTF1-204ENST00000558117 CENPWQ5EE01 88 aa3.39□□□□□ -1.87
RTF1-204ENST00000558117 SPANXN5Q5MJ07 72 aa3.39□□□□□ -1.87
RTF1-204ENST00000558117 SCGB1D4Q6XE38 83 aa3.39□□□□□ -1.87
RTF1-204ENST00000558117 FAM19A3Q7Z5A8 133 aa3.39□□□□□ -1.87
RTF1-204ENST00000558117 OR1L8Q8NGR8 309 aa3.39□□□□□ -1.87
RTF1-204ENST00000558117 SPIN2AQ99865 258 aa3.39□□□□□ -1.87
RTF1-204ENST00000558117 SPIN2BQ9BPZ2 258 aa3.39□□□□□ -1.87
RTF1-204ENST00000558117 ZNF430Q9H8G1 570 aaPredicted RBP3.39□□□□□ -1.87
RTF1-204ENST00000558117 DAZ1Q9NQZ3 744 aaKnown RBP3.39□□□□□ -1.87
RTF1-204ENST00000558117 TNFSF18Q9UNG2 199 aa3.39□□□□□ -1.87
RTF1-204ENST00000558117 S4R3C0 116 aa3.39□□□□□ -1.87
RTF1-204ENST00000558117 IGKV3-7A0A075B6H7 116 aa3.38□□□□□ -1.87
RTF1-204ENST00000558117 IGLV11-55A0A075B6I3 123 aa3.38□□□□□ -1.87
RTF1-204ENST00000558117 IGHV3-21A0A0B4J1V1 117 aa3.38□□□□□ -1.87
RTF1-204ENST00000558117 A0A1B0GVX0 72 aa3.38□□□□□ -1.87
RTF1-204ENST00000558117 DUXBA0A1W2PPF3 345 aa3.38□□□□□ -1.87
RTF1-204ENST00000558117 KNCNA6PVL3 124 aa3.38□□□□□ -1.87
RTF1-204ENST00000558117 RBFOX2O43251 390 aaKnown RBP eCLIP3.38□□□□□ -1.87
RTF1-204ENST00000558117 COX7A2P2O60397 106 aa3.38□□□□□ -1.87
RTF1-204ENST00000558117 S100A11P31949 105 aa3.38□□□□□ -1.87
RTF1-204ENST00000558117 RPS10P46783 165 aaKnown RBP3.38□□□□□ -1.87
RTF1-204ENST00000558117 HSPE1P61604 102 aaKnown RBP3.38□□□□□ -1.87
RTF1-204ENST00000558117 VMA21Q3ZAQ7 101 aa3.38□□□□□ -1.87
RTF1-204ENST00000558117 RPL7L1Q6DKI1 246 aaKnown RBP3.38□□□□□ -1.87
RTF1-204ENST00000558117 KRTAP5-5Q701N2 237 aaPredicted RBP3.38□□□□□ -1.87
RTF1-204ENST00000558117 SMIM15Q7Z3B0 74 aa3.38□□□□□ -1.87
RTF1-204ENST00000558117 SLC51BQ86UW2 128 aa3.38□□□□□ -1.87
RTF1-204ENST00000558117 PDPNQ86YL7 162 aa3.38□□□□□ -1.87
RTF1-204ENST00000558117 KCNRGQ8N5I3 272 aa3.38□□□□□ -1.87
RTF1-204ENST00000558117 C15orf56Q8N910 161 aa3.38□□□□□ -1.87
RTF1-204ENST00000558117 OR2D3Q8NGH3 330 aa3.38□□□□□ -1.87
RTF1-204ENST00000558117 ZNF471Q9BX82 626 aaPredicted RBP3.38□□□□□ -1.87
RTF1-204ENST00000558117 C11orf1Q9H5F2 150 aa3.38□□□□□ -1.87
RTF1-204ENST00000558117 RPP21Q9H633 154 aaKnown RBP3.38□□□□□ -1.87
RTF1-204ENST00000558117 ENY2Q9NPA8 101 aa3.38□□□□□ -1.87
RTF1-204ENST00000558117 CYTL1Q9NRR1 136 aa3.38□□□□□ -1.87
RTF1-204ENST00000558117 SMPXQ9UHP9 88 aa3.38□□□□□ -1.87
RTF1-204ENST00000558117 KANTRA0A1W2PQU2 76 aa3.37□□□□□ -1.87
RTF1-204ENST00000558117 HMSDA8MTL9 139 aa3.37□□□□□ -1.87
RTF1-204ENST00000558117 ISLRO14498 428 aa3.37□□□□□ -1.87
RTF1-204ENST00000558117 YIF1AO95070 293 aa3.37□□□□□ -1.87
RTF1-204ENST00000558117 OR13C7P0DN81 318 aa3.37□□□□□ -1.87
RTF1-204ENST00000558117 SLC25A6P12236 298 aa3.37□□□□□ -1.87
RTF1-204ENST00000558117 UBE2AP49459 152 aa3.37□□□□□ -1.87
RTF1-204ENST00000558117 KRTAP6-3Q3LI67 103 aa3.37□□□□□ -1.87
RTF1-204ENST00000558117 FAM74A1Q5RGS3 127 aa3.37□□□□□ -1.87
RTF1-204ENST00000558117 ALKAL2Q6UX46 152 aa3.37□□□□□ -1.87
RTF1-204ENST00000558117 TTC9CQ8N5M4 171 aa3.37□□□□□ -1.87
RTF1-204ENST00000558117 TMEM167AQ8TBQ9 72 aa3.37□□□□□ -1.87
RTF1-204ENST00000558117 YPEL4Q96NS1 127 aa3.37□□□□□ -1.87
RTF1-204ENST00000558117 GNB1LQ9BYB4 327 aa3.37□□□□□ -1.87
RTF1-204ENST00000558117 COMMD5Q9GZQ3 224 aa3.37□□□□□ -1.87
RTF1-204ENST00000558117 PRNDQ9UKY0 176 aa3.37□□□□□ -1.87
RTF1-204ENST00000558117 MUC12Q9UKN1 5478 aa3.36□□□□□ -1.87
RTF1-204ENST00000558117 A0A0D9SG52 128 aa3.36□□□□□ -1.87
RTF1-204ENST00000558117 ZNF207O43670 478 aaKnown RBP3.36□□□□□ -1.87
RTF1-204ENST00000558117 MED6O75586 246 aa3.36□□□□□ -1.87
RTF1-204ENST00000558117 OR5G3P0C626 314 aa3.36□□□□□ -1.87
RTF1-204ENST00000558117 DDTP30046 118 aa3.36□□□□□ -1.87
RTF1-204ENST00000558117 SNCAP37840 140 aa3.36□□□□□ -1.87
RTF1-204ENST00000558117 RPL27AP46776 148 aaKnown RBP3.36□□□□□ -1.87
RTF1-204ENST00000558117 MP68P56378 58 aa3.36□□□□□ -1.87
RTF1-204ENST00000558117 WT1-ASQ06250 92 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms