RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 SLC25A29Q8N8R3 303 aa8.76□□□□□ -1.01
TPM1-209ENST00000558072 ALKBH7Q9BT30 221 aaPredicted RBP8.76□□□□□ -1.01
TPM1-209ENST00000558072 NXT2Q9NPJ8 142 aaKnown RBP8.76□□□□□ -1.01
TPM1-209ENST00000558072 COL7A1Q02388 2944 aa8.75□□□□□ -1.01
TPM1-209ENST00000558072 TRBV7-3A0A075B6L6 115 aa8.75□□□□□ -1.01
TPM1-209ENST00000558072 VCYO14598 125 aa8.75□□□□□ -1.01
TPM1-209ENST00000558072 TNFRSF6BO95407 300 aa8.75□□□□□ -1.01
TPM1-209ENST00000558072 HTN3P15516 51 aa8.75□□□□□ -1.01
TPM1-209ENST00000558072 PMCHP20382 165 aa8.75□□□□□ -1.01
TPM1-209ENST00000558072 SRIP30626 198 aa8.75□□□□□ -1.01
TPM1-209ENST00000558072 NANOS2P60321 138 aaKnown RBP8.75□□□□□ -1.01
TPM1-209ENST00000558072 SUMO2P61956 95 aaKnown RBP8.75□□□□□ -1.01
TPM1-209ENST00000558072 MRPL23Q16540 153 aaKnown RBP8.75□□□□□ -1.01
TPM1-209ENST00000558072 KIAA1644Q3SXP7 199 aa8.75□□□□□ -1.01
TPM1-209ENST00000558072 Q6ZTC4 211 aa8.75□□□□□ -1.01
TPM1-209ENST00000558072 DAZ4Q86SG3 579 aaKnown RBP8.75□□□□□ -1.01
TPM1-209ENST00000558072 C15orf53Q8NAA6 179 aa8.75□□□□□ -1.01
TPM1-209ENST00000558072 DAZ3Q9NR90 486 aaKnown RBP8.75□□□□□ -1.01
TPM1-209ENST00000558072 TRAV26-1A0A087WT03 109 aa8.74□□□□□ -1.01
TPM1-209ENST00000558072 LINC01549A6NIU2 74 aa8.74□□□□□ -1.01
TPM1-209ENST00000558072 Q0VG73 95 aa8.74□□□□□ -1.01
TPM1-209ENST00000558072 PRSS3P2Q8NHM4 247 aa8.74□□□□□ -1.01
TPM1-209ENST00000558072 KIR2DL4Q99706 377 aa8.74□□□□□ -1.01
TPM1-209ENST00000558072 ICOSQ9Y6W8 199 aa8.74□□□□□ -1.01
TPM1-209ENST00000558072 TRAV26-2A0A0B4J265 109 aa8.73□□□□□ -1.01
TPM1-209ENST00000558072 TCTAP57738 103 aa8.73□□□□□ -1.01
TPM1-209ENST00000558072 NRACQ8N912 160 aa8.73□□□□□ -1.01
TPM1-209ENST00000558072 KLK5Q9Y337 293 aaPredicted RBP8.73□□□□□ -1.01
TPM1-209ENST00000558072 TRBV27A0A0K0K1C4 114 aa8.72□□□□□ -1.01
TPM1-209ENST00000558072 NUPR2A6NF83 97 aa8.72□□□□□ -1.01
TPM1-209ENST00000558072 SDHAF1A6NFY7 115 aa8.72□□□□□ -1.01
TPM1-209ENST00000558072 I3L3M4 83 aa8.72□□□□□ -1.01
TPM1-209ENST00000558072 NCR2O95944 276 aa8.72□□□□□ -1.01
TPM1-209ENST00000558072 GYPEP15421 78 aa8.72□□□□□ -1.01
TPM1-209ENST00000558072 HOXA5P20719 270 aa8.72□□□□□ -1.01
TPM1-209ENST00000558072 SMAGPQ0VAQ4 97 aa8.72□□□□□ -1.01
TPM1-209ENST00000558072 FA2HQ7L5A8 372 aa8.72□□□□□ -1.01
TPM1-209ENST00000558072 BAGE3Q86Y29 109 aa8.72□□□□□ -1.01
TPM1-209ENST00000558072 NEXN-AS1Q8NBZ9 246 aa8.72□□□□□ -1.01
TPM1-209ENST00000558072 ZNRF2Q8NHG8 242 aa8.72□□□□□ -1.01
TPM1-209ENST00000558072 PHLDA1Q8WV24 401 aaPredicted RBP8.72□□□□□ -1.01
TPM1-209ENST00000558072 NACAE9PAV3 2078 aa8.71□□□□□ -1.01
TPM1-209ENST00000558072 SMKR1H3BMG3 65 aa8.71□□□□□ -1.02
TPM1-209ENST00000558072 NPYP01303 97 aa8.71□□□□□ -1.02
TPM1-209ENST00000558072 S100A6P06703 90 aa8.71□□□□□ -1.02
TPM1-209ENST00000558072 POLR2KP53803 58 aaKnown RBP8.71□□□□□ -1.02
TPM1-209ENST00000558072 Q6ZSN1 163 aa8.71□□□□□ -1.02
TPM1-209ENST00000558072 Q8N8P6 123 aa8.71□□□□□ -1.02
TPM1-209ENST00000558072 CHCHD1Q96BP2 118 aaKnown RBP8.71□□□□□ -1.02
TPM1-209ENST00000558072 TMEM70Q9BUB7 260 aa8.71□□□□□ -1.02
TPM1-209ENST00000558072 SMIM2Q9BVW6 85 aa8.71□□□□□ -1.02
TPM1-209ENST00000558072 HIST1H2BKO60814 126 aa8.7□□□□□ -1.02
TPM1-209ENST00000558072 HIST1H2BJP06899 126 aa8.7□□□□□ -1.02
TPM1-209ENST00000558072 HIST1H2BOP23527 126 aa8.7□□□□□ -1.02
TPM1-209ENST00000558072 FCER1GP30273 86 aa8.7□□□□□ -1.02
TPM1-209ENST00000558072 HIST1H2BBP33778 126 aa8.7□□□□□ -1.02
TPM1-209ENST00000558072 HIST1H2BDP58876 126 aa8.7□□□□□ -1.02
TPM1-209ENST00000558072 UBE2D3P61077 147 aa8.7□□□□□ -1.02
TPM1-209ENST00000558072 HIST1H2BCP62807 126 aa8.7□□□□□ -1.02
TPM1-209ENST00000558072 UBE2D2P62837 147 aa8.7□□□□□ -1.02
TPM1-209ENST00000558072 COTL1Q14019 142 aa8.7□□□□□ -1.02
TPM1-209ENST00000558072 HIST2H2BEQ16778 126 aa8.7□□□□□ -1.02
TPM1-209ENST00000558072 ORMDL2Q53FV1 153 aa8.7□□□□□ -1.02
TPM1-209ENST00000558072 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.7□□□□□ -1.02
TPM1-209ENST00000558072 NEGR1Q7Z3B1 354 aa8.7□□□□□ -1.02
TPM1-209ENST00000558072 ATP6V0E2Q8NHE4 81 aa8.7□□□□□ -1.02
TPM1-209ENST00000558072 C18orf32Q8TCD1 76 aa8.7□□□□□ -1.02
TPM1-209ENST00000558072 HIST1H2BHQ93079 126 aa8.7□□□□□ -1.02
TPM1-209ENST00000558072 TMEM18Q96B42 140 aa8.7□□□□□ -1.02
TPM1-209ENST00000558072 RPL39LQ96EH5 51 aaKnown RBP8.7□□□□□ -1.02
TPM1-209ENST00000558072 HIST1H2BNQ99877 126 aa8.7□□□□□ -1.02
TPM1-209ENST00000558072 HIST1H2BMQ99879 126 aa8.7□□□□□ -1.02
TPM1-209ENST00000558072 GAGE12JA6NER3 117 aa8.69□□□□□ -1.02
TPM1-209ENST00000558072 LINC00614P0C842 121 aa8.69□□□□□ -1.02
TPM1-209ENST00000558072 TIRAPP58753 221 aa8.69□□□□□ -1.02
TPM1-209ENST00000558072 PKIAP61925 76 aa8.69□□□□□ -1.02
TPM1-209ENST00000558072 GAGE1Q13065 139 aa8.69□□□□□ -1.02
TPM1-209ENST00000558072 GAGE4Q13068 117 aa8.69□□□□□ -1.02
TPM1-209ENST00000558072 GAGE5Q13069 117 aa8.69□□□□□ -1.02
TPM1-209ENST00000558072 GAGE13Q4V321 117 aa8.69□□□□□ -1.02
TPM1-209ENST00000558072 GTSF1LQ9H1H1 148 aa8.69□□□□□ -1.02
TPM1-209ENST00000558072 AP5S1Q9NUS5 200 aa8.69□□□□□ -1.02
TPM1-209ENST00000558072 A0A0J9YY99 117 aa8.68□□□□□ -1.02
TPM1-209ENST00000558072 LOC389332A0A1B0GUA5 103 aa8.68□□□□□ -1.02
TPM1-209ENST00000558072 CEMP1Q6PRD7 247 aaPredicted RBP8.68□□□□□ -1.02
TPM1-209ENST00000558072 VSIG2Q96IQ7 327 aa8.68□□□□□ -1.02
TPM1-209ENST00000558072 WWC2-AS2Q96NR7 200 aa8.68□□□□□ -1.02
TPM1-209ENST00000558072 P0DMU3 169 aa8.67□□□□□ -1.02
TPM1-209ENST00000558072 FAM231AP0DMU4 169 aa8.67□□□□□ -1.02
TPM1-209ENST00000558072 FAM231CP0DMU5 169 aa8.67□□□□□ -1.02
TPM1-209ENST00000558072 LAGE3Q14657 143 aa8.67□□□□□ -1.02
TPM1-209ENST00000558072 COA6Q5JTJ3 125 aaKnown RBP8.67□□□□□ -1.02
TPM1-209ENST00000558072 NIT1Q86X76 327 aa8.67□□□□□ -1.02
TPM1-209ENST00000558072 TRBV25-1A0A075B6N4 114 aa8.66□□□□□ -1.02
TPM1-209ENST00000558072 LINC01546A6NGU7 62 aa8.66□□□□□ -1.02
TPM1-209ENST00000558072 H7C423 109 aa8.66□□□□□ -1.02
TPM1-209ENST00000558072 HSBP1O75506 76 aa8.66□□□□□ -1.02
TPM1-209ENST00000558072 LINC00694P0DN24 101 aa8.66□□□□□ -1.02
TPM1-209ENST00000558072 IFI27P40305 119 aaPredicted RBP8.66□□□□□ -1.02
TPM1-209ENST00000558072 IGHV1-24A0A0C4DH33 117 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms