RNA–Protein interactions for RNA: ENST00000557845.1

NEDD4-212, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-212ENST00000557845 CACNG7P62955 275 aa11.1□□□□□ -0.63
NEDD4-212ENST00000557845 BLOC1S1P78537 153 aa11.1□□□□□ -0.63
NEDD4-212ENST00000557845 ALKAL2Q6UX46 152 aa11.1□□□□□ -0.63
NEDD4-212ENST00000557845 NTN5Q8WTR8 489 aaPredicted RBP11.1□□□□□ -0.63
NEDD4-212ENST00000557845 AP1S3Q96PC3 154 aa11.1□□□□□ -0.63
NEDD4-212ENST00000557845 CHCHD7Q9BUK0 85 aa11.1□□□□□ -0.63
NEDD4-212ENST00000557845 KLK12Q9UKR0 248 aa11.1□□□□□ -0.63
NEDD4-212ENST00000557845 A0A087WX48 190 aa11.09□□□□□ -0.63
NEDD4-212ENST00000557845 F2Z2F3 143 aa11.09□□□□□ -0.63
NEDD4-212ENST00000557845 NUDT10Q8NFP7 164 aa11.09□□□□□ -0.63
NEDD4-212ENST00000557845 NUDT11Q96G61 164 aa11.09□□□□□ -0.63
NEDD4-212ENST00000557845 COX11Q9Y6N1 276 aa11.09□□□□□ -0.63
NEDD4-212ENST00000557845 TMEM262E9PQX1 116 aa11.08□□□□□ -0.64
NEDD4-212ENST00000557845 ELOBQ15370 118 aa11.08□□□□□ -0.64
NEDD4-212ENST00000557845 KCNIP4Q6PIL6 250 aa11.08□□□□□ -0.64
NEDD4-212ENST00000557845 LYZL1Q6UWQ5 148 aa11.08□□□□□ -0.64
NEDD4-212ENST00000557845 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.08□□□□□ -0.64
NEDD4-212ENST00000557845 OCC1Q8TAD7 63 aa11.08□□□□□ -0.64
NEDD4-212ENST00000557845 DNAJC30Q96LL9 226 aa11.08□□□□□ -0.64
NEDD4-212ENST00000557845 WFDC2Q14508 124 aa11.07□□□□□ -0.64
NEDD4-212ENST00000557845 LYPD6BQ8NI32 183 aa11.07□□□□□ -0.64
NEDD4-212ENST00000557845 RMI2Q96E14 147 aa11.07□□□□□ -0.64
NEDD4-212ENST00000557845 K7EN84 100 aa11.06□□□□□ -0.64
NEDD4-212ENST00000557845 M0QY20 66 aa11.06□□□□□ -0.64
NEDD4-212ENST00000557845 MGPP08493 103 aa11.06□□□□□ -0.64
NEDD4-212ENST00000557845 NTF3P20783 257 aa11.06□□□□□ -0.64
NEDD4-212ENST00000557845 TMEM97Q5BJF2 176 aa11.06□□□□□ -0.64
NEDD4-212ENST00000557845 NTM-AS1Q6ZSK4 140 aa11.06□□□□□ -0.64
NEDD4-212ENST00000557845 TMEM250H0YL14 139 aa11.05□□□□□ -0.64
NEDD4-212ENST00000557845 WDR73Q6P4I2 378 aa11.05□□□□□ -0.64
NEDD4-212ENST00000557845 BAALCQ8WXS3 180 aa11.05□□□□□ -0.64
NEDD4-212ENST00000557845 UBE2WQ96B02 151 aa11.05□□□□□ -0.64
NEDD4-212ENST00000557845 RNASE7Q9H1E1 156 aaKnown RBP11.05□□□□□ -0.64
NEDD4-212ENST00000557845 IGKV2D-24A0A075B6R9 120 aa11.04□□□□□ -0.64
NEDD4-212ENST00000557845 H7C1H1 209 aa11.04□□□□□ -0.64
NEDD4-212ENST00000557845 LECT2O14960 151 aa11.04□□□□□ -0.64
NEDD4-212ENST00000557845 TRGC1P0CF51 173 aa11.04□□□□□ -0.64
NEDD4-212ENST00000557845 NKX2-5P52952 324 aaPredicted RBP11.04□□□□□ -0.64
NEDD4-212ENST00000557845 Q0VG73 95 aa11.04□□□□□ -0.64
NEDD4-212ENST00000557845 SUMO4Q6EEV6 95 aa11.04□□□□□ -0.64
NEDD4-212ENST00000557845 RPP21Q9H633 154 aaKnown RBP11.04□□□□□ -0.64
NEDD4-212ENST00000557845 A0A1B0GVG6 124 aa11.03□□□□□ -0.64
NEDD4-212ENST00000557845 MPV17L2Q567V2 206 aa11.03□□□□□ -0.64
NEDD4-212ENST00000557845 ATRAIDQ6UW56 229 aa11.03□□□□□ -0.64
NEDD4-212ENST00000557845 ENHOQ6UWT2 76 aa11.03□□□□□ -0.64
NEDD4-212ENST00000557845 CHCHD5Q9BSY4 110 aa11.03□□□□□ -0.64
NEDD4-212ENST00000557845 DPH3P1Q9H4G8 78 aa11.03□□□□□ -0.64
NEDD4-212ENST00000557845 EPM2AB3EWF7 344 aa11.02□□□□□ -0.65
NEDD4-212ENST00000557845 CTRLP40313 264 aa11.02□□□□□ -0.65
NEDD4-212ENST00000557845 PKIAP61925 76 aa11.02□□□□□ -0.65
NEDD4-212ENST00000557845 C15orf54Q8N8G6 183 aa11.02□□□□□ -0.65
NEDD4-212ENST00000557845 TRBV25-1A0A075B6N4 114 aa11.01□□□□□ -0.65
NEDD4-212ENST00000557845 ANGP03950 147 aaKnown RBP11.01□□□□□ -0.65
NEDD4-212ENST00000557845 TWIST1Q15672 202 aa11.01□□□□□ -0.65
NEDD4-212ENST00000557845 RASL11AQ6T310 242 aa11.01□□□□□ -0.65
NEDD4-212ENST00000557845 TMEM70Q9BUB7 260 aa11.01□□□□□ -0.65
NEDD4-212ENST00000557845 CNFNQ9BYD5 112 aa11.01□□□□□ -0.65
NEDD4-212ENST00000557845 IGLV2-33A0A075B6J2 118 aaPredicted RBP11□□□□□ -0.65
NEDD4-212ENST00000557845 IQCJQ1A5X6 159 aa11□□□□□ -0.65
NEDD4-212ENST00000557845 Q8N976 141 aa11□□□□□ -0.65
NEDD4-212ENST00000557845 EIF5A2Q9GZV4 153 aaKnown RBP11□□□□□ -0.65
NEDD4-212ENST00000557845 NIT2Q9NQR4 276 aa11□□□□□ -0.65
NEDD4-212ENST00000557845 DNAH8Q96JB1 4490 aa10.99□□□□□ -0.65
NEDD4-212ENST00000557845 GATCO43716 136 aaKnown RBP10.99□□□□□ -0.65
NEDD4-212ENST00000557845 CRPP02741 224 aa10.99□□□□□ -0.65
NEDD4-212ENST00000557845 CEBPGP53567 150 aa10.99□□□□□ -0.65
NEDD4-212ENST00000557845 FAM231DQ6ZW35 169 aa10.99□□□□□ -0.65
NEDD4-212ENST00000557845 GTSF1Q8WW33 167 aa10.99□□□□□ -0.65
NEDD4-212ENST00000557845 C1orf43Q9BWL3 253 aa10.99□□□□□ -0.65
NEDD4-212ENST00000557845 IGHV1-24A0A0C4DH33 117 aa10.98□□□□□ -0.65
NEDD4-212ENST00000557845 NDUFS6O75380 124 aaKnown RBP10.98□□□□□ -0.65
NEDD4-212ENST00000557845 SMR3BP02814 79 aaPredicted RBP10.98□□□□□ -0.65
NEDD4-212ENST00000557845 GAGE6Q13070 117 aa10.98□□□□□ -0.65
NEDD4-212ENST00000557845 FAM210AQ96ND0 272 aa10.98□□□□□ -0.65
NEDD4-212ENST00000557845 FAM30AQ9NZY2 134 aa10.98□□□□□ -0.65
NEDD4-212ENST00000557845 FAT1Q14517 4588 aa10.97□□□□□ -0.65
NEDD4-212ENST00000557845 RBX1P62877 108 aa10.97□□□□□ -0.65
NEDD4-212ENST00000557845 HAMPP81172 84 aa10.97□□□□□ -0.65
NEDD4-212ENST00000557845 FRZBQ92765 325 aa10.97□□□□□ -0.65
NEDD4-212ENST00000557845 A8MWL6 223 aa10.96□□□□□ -0.65
NEDD4-212ENST00000557845 MIAQ16674 131 aa10.96□□□□□ -0.65
NEDD4-212ENST00000557845 PRR34Q9NV39 138 aa10.96□□□□□ -0.65
NEDD4-212ENST00000557845 SRP19P09132 144 aaKnown RBP10.95□□□□□ -0.66
NEDD4-212ENST00000557845 FOXA3P55318 350 aaPredicted RBP10.95□□□□□ -0.66
NEDD4-212ENST00000557845 Q5VSD8 79 aa10.95□□□□□ -0.66
NEDD4-212ENST00000557845 LINC00269Q8N2A0 174 aa10.95□□□□□ -0.66
NEDD4-212ENST00000557845 GATD1Q8NB37 220 aa10.95□□□□□ -0.66
NEDD4-212ENST00000557845 PGLYRP4Q96LB8 373 aa10.95□□□□□ -0.66
NEDD4-212ENST00000557845 SMIM7Q9BQ49 75 aa10.95□□□□□ -0.66
NEDD4-212ENST00000557845 ZNF727A8MUV8 499 aa10.94□□□□□ -0.66
NEDD4-212ENST00000557845 CT83Q5H943 113 aa10.94□□□□□ -0.66
NEDD4-212ENST00000557845 SMIM15Q7Z3B0 74 aa10.94□□□□□ -0.66
NEDD4-212ENST00000557845 LINC01551Q86U37 167 aa10.94□□□□□ -0.66
NEDD4-212ENST00000557845 DEFB104AQ8WTQ1 72 aa10.94□□□□□ -0.66
NEDD4-212ENST00000557845 TMEM243Q9BU79 118 aa10.94□□□□□ -0.66
NEDD4-212ENST00000557845 TRAV26-2A0A0B4J265 109 aa10.93□□□□□ -0.66
NEDD4-212ENST00000557845 LINC01620Q4KN68 170 aa10.93□□□□□ -0.66
NEDD4-212ENST00000557845 CLPSL2Q6UWE3 100 aa10.93□□□□□ -0.66
NEDD4-212ENST00000557845 Q6ZSA8 131 aa10.93□□□□□ -0.66
NEDD4-212ENST00000557845 A0A1B0GUV1 79 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms